Sol Spiegelman - Related publications

Affiliations: 
1949-1969 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
 1969-1983 Columbia University, New York, NY 
Area:
Genetics
Website:
http://profiles.nlm.nih.gov/ps/retrieve/Collection/CID/PX
NOTE: We are testing a new system for identifying relevant work based on semantic analysis that identifies similarities between recently published papers and the current author's publications. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches.
50 most relevant papers in past 60 days:
Year Citation  Score
2021 Wang S, Shanthan G, Bouzga MM, Thi Dinh HM, Haas C, Fonneløp AE. Evaluating the performance of five up-to-date DNA/RNA co-extraction methods for forensic application. Forensic Science International. 328: 110996. PMID 34592582 DOI: 10.1016/j.forsciint.2021.110996   
2021 Quinodoz SA, Jachowicz JW, Bhat P, Ollikainen N, Banerjee AK, Goronzy IN, Blanco MR, Chovanec P, Chow A, Markaki Y, Thai J, Plath K, Guttman M. RNA promotes the formation of spatial compartments in the nucleus. Cell. 184: 5775-5790.e30. PMID 34739832 DOI: 10.1016/j.cell.2021.10.014   
2021 Xiao L, Jun YW, Kool ET. DNA tiling enables precise acylation-based labeling and control of mRNA. Angewandte Chemie (International Ed. in English). PMID 34624169 DOI: 10.1002/anie.202112106   
2021 Endo M, Kim JI, Shioi NA, Iwai S, Kuraoka I. endonuclease V is a ribonuclease specific for inosine-containing single-stranded RNA. Open Biology. 11: 210148. PMID 34665969 DOI: 10.1098/rsob.210148   
2021 Zhou Y, Yang J, Tian Z, Zeng J, Shen W. Research progress concerning mA methylation and cancer. Oncology Letters. 22: 775. PMID 34589154 DOI: 10.3892/ol.2021.13036   
2021 Zhang S, Sun J, Gu M, Wang G, Wang X. Circular RNA: A promising new star for the diagnosis and treatment of colorectal cancer. Cancer Medicine. PMID 34796685 DOI: 10.1002/cam4.4398   
2021 Zhan X, Deng L, Chen G. Mechanisms and applications of peptide nucleic acids selectively binding to double-stranded RNA. Biopolymers. e23476. PMID 34581432 DOI: 10.1002/bip.23476   
2021 Chérif N, Zouari M, Amdouni F, Mefteh M, Ksouri A, Bouhaouala-Zahar B, Raouafi N. Direct Amperometric Sensing of Fish Nodavirus RNA Using Gold Nanoparticle/DNA-Based Bioconjugates. Pathogens (Basel, Switzerland). 10. PMID 34451396 DOI: 10.3390/pathogens10080932   
2021 Guo X, Tariq M, Lai Y, Kanwal S, Lv Y, Wang X, Li N, Jiang M, Meng J, Hu J, Yuan J, Luo Z, Ward C, Volpe G, Wang D, et al. Capture of the newly transcribed RNA interactome using click chemistry. Nature Protocols. PMID 34697467 DOI: 10.1038/s41596-021-00609-y   
2021 Kordyś M, Sen R, Warkocki Z. Applications of the versatile CRISPR-Cas13 RNA targeting system. Wiley Interdisciplinary Reviews. Rna. e1694. PMID 34553495 DOI: 10.1002/wrna.1694   
2021 Mai L, Qiu Y, Lian Z, Chen C, Wang L, Yin Y, Wang S, Yang X, Li Y, Peng W, Luo C, Pan X. MustSeq, an alternative approach for multiplexible strand-specific 3' end sequencing of mRNA transcriptome confers high efficiency and practicality. Rna Biology. 1-12. PMID 34586036 DOI: 10.1080/15476286.2021.1974208   
2021 Soszynska-Jozwiak M, Pszczola M, Piasecka J, Peterson JM, Moss WN, Taras-Goslinska K, Kierzek R, Kierzek E. Universal and strain specific structure features of segment 8 genomic RNA of influenza A virus - application of 4-thiouridine photocrosslinking. The Journal of Biological Chemistry. 101245. PMID 34688660 DOI: 10.1016/j.jbc.2021.101245   
2021 Choi MH, Nguyen VT, Ravi Kumara GS, Seo YJ. RNA Polymerase-Mediated Stepwise RNA-Primed RNA Polymerization for Site-Specific Multiple Labeling into RNA: A Fluorescence Resonance Energy Transfer Probe Detects the Structural Change of an RNA G-Quadruplex. Acs Synthetic Biology. PMID 34762391 DOI: 10.1021/acssynbio.1c00418   
2021 Si C, Chen C, Guo Y, Kang Q, Sun Z. Effect, Mechanism, and Applications of Coding/Non-coding RNA m6A Modification in Tumor Microenvironment. Frontiers in Cell and Developmental Biology. 9: 711815. PMID 34660577 DOI: 10.3389/fcell.2021.711815   
2021 Pérez-Cañamás M, Hevia E, Katsarou K, Hernández C. Genetic evidence for the involvement of Dicer-like 2 and 4 as well as Argonaute 2 in the response against . The Journal of General Virology. 102. PMID 34623234 DOI: 10.1099/jgv.0.001656   
2021 Johnson KA, Dangerfield T. Mechanisms of inhibition of viral RNA replication by nucleotide analogs. The Enzymes. 49: 39-62. PMID 34696838 DOI: 10.1016/bs.enz.2021.07.001   
2021 Lambert M, Benmoussa A, Diallo I, Ouellet-Boutin K, Dorval V, Majeau N, Joly-Beauparlant C, Droit A, Bergeron A, Têtu B, Fradet Y, Pouliot F, Provost P. Identification of Abundant and Functional dodecaRNAs (doRNAs) Derived from Ribosomal RNA. International Journal of Molecular Sciences. 22. PMID 34575920 DOI: 10.3390/ijms22189757   
2021 Chen B, Shi H, Zhang J, Zhou C, Han M, Jiang W, Lai Y, Tu X, Li H. CRISPR-based RNA-binding protein mapping in live cells. Biochemical and Biophysical Research Communications. 583: 79-85. PMID 34735883 DOI: 10.1016/j.bbrc.2021.10.059   
2021 Natarajan A, Han A, Zlitni S, Brooks EF, Vance SE, Wolfe M, Singh U, Jagannathan P, Pinsky BA, Boehm A, Bhatt AS. Standardized preservation, extraction and quantification techniques for detection of fecal SARS-CoV-2 RNA. Nature Communications. 12: 5753. PMID 34599164 DOI: 10.1038/s41467-021-25576-6   
2021 Malone B, Campbell EA, Darst SA. CoV-er all the bases: Structural perspectives of SARS-CoV-2 RNA synthesis. The Enzymes. 49: 1-37. PMID 34696829 DOI: 10.1016/bs.enz.2021.06.004   
2021 Mulroney L, Wulf M, Schildkraut I, Tzertzinis G, Buswell J, Jain M, Olsen HE, Diekhans M, Corrêa IR, Akeson M, Ettwiller L. Identification of high confidence human poly(A) RNA isoform scaffolds using nanopore sequencing. Rna (New York, N.Y.). PMID 34728536 DOI: 10.1261/rna.078703.121   
2021 Mulroney L, Wulf M, Schildkraut I, Tzertzinis G, Buswell J, Jain M, Olsen HE, Diekhans M, Corrêa IR, Akeson M, Ettwiller L. Identification of high confidence human poly(A) RNA isoform scaffolds using nanopore sequencing. Rna (New York, N.Y.). PMID 34728536 DOI: 10.1261/rna.078703.121   
2021 Biswal JK, Ranjan R, Dahiya SS, Mallick S, Mohapatra JK. Regenerated silica-based RNA purification columns to address the short supply of RNA purification kits for COVID-19 diagnosis. Molecular Biology Reports. 48: 6871-6877. PMID 34510319 DOI: 10.1007/s11033-021-06688-0   
2021 Domingo E, García-Crespo C, Lobo-Vega R, Perales C. Mutation Rates, Mutation Frequencies, and Proofreading-Repair Activities in RNA Virus Genetics. Viruses. 13. PMID 34578463 DOI: 10.3390/v13091882   
2021 Kim KR, Kim J, Mao C, Ahn DR. Kissing loop-mediated fabrication of RNA nanoparticles and their potential as cellular and siRNA delivery platforms. Biomaterials Science. PMID 34755728 DOI: 10.1039/d1bm01440d   
2021 Su L, Chen F, Yu H, Yan H, Zhao F, Fan C, Zhao Y. Addition-Elimination Mechanism-Activated Nucleotide Transition Sequencing for RNA Dynamics Profiling. Analytical Chemistry. PMID 34612623 DOI: 10.1021/acs.analchem.1c03361   
2021 Ingram ZM, Schneider DA, Lucius AL. Transient-state kinetic analysis of multi-nucleotide addition catalyzed by RNA polymerase I. Biophysical Journal. 120: 4378-4390. PMID 34509510 DOI: 10.1016/j.bpj.2021.09.008   
2021 Sun L, McNulty SN, Evenson MJ, Zhu X, Robinson J, Mann PR, Duncavage EJ, Pfeifer JD. Clinical Implications of a Targeted RNA-Sequencing Panel in the Detection of Gene Fusions in Solid Tumors. The Journal of Molecular Diagnostics : Jmd. PMID 34562614 DOI: 10.1016/j.jmoldx.2021.08.009   
2021 Le Vay KK, Song EY, Ghosh B, Tang TD, Mutschler H. Enhanced ribozyme-catalyzed recombination and oligonucleotide assembly in peptide-RNA condensates. Angewandte Chemie (International Ed. in English). PMID 34569680 DOI: 10.1002/anie.202109267   
2021 Chatterjee B, Shen CJ, Majumder P. RNA Modifications and RNA Metabolism in Neurological Disease Pathogenesis. International Journal of Molecular Sciences. 22. PMID 34769301 DOI: 10.3390/ijms222111870   
2021 Jang B, Jang H, Kim H, Kim M, Jeong M, Lee GS, Lee K, Lee H. Protein-RNA interaction guided chemical modification of Dicer substrate RNA nanostructures for superior in vivo gene silencing. Journal of Controlled Release : Official Journal of the Controlled Release Society. PMID 34763005 DOI: 10.1016/j.jconrel.2021.11.009   
2021 Ghimire S, Stewart CG, Thurman AL, Pezzulo AA. Performance of a scalable RNA extraction-free transcriptome profiling method for adherent cultured human cells. Scientific Reports. 11: 19438. PMID 34593905 DOI: 10.1038/s41598-021-98912-x   
2021 Zhao Y, Shu R, Liu J. The development and improvement of ribonucleic acid therapy strategies. Molecular Therapy. Nucleic Acids. PMID 34540356 DOI: 10.1016/j.omtn.2021.09.002   
2021 Hong P, Yu M, Tian W. Diverse RNAs in adipose-derived extracellular vesicles and their therapeutic potential. Molecular Therapy. Nucleic Acids. 26: 665-677. PMID 34703651 DOI: 10.1016/j.omtn.2021.08.028   
2021 Vicens Q, Kieft JS. Shared properties and singularities of exoribonuclease-resistant RNAs in viruses. Computational and Structural Biotechnology Journal. 19: 4373-4380. PMID 34471487 DOI: 10.1016/j.csbj.2021.07.024   
2021 Feng JY, Ray AS. HCV RdRp, sofosbuvir and beyond. The Enzymes. 49: 63-82. PMID 34696839 DOI: 10.1016/bs.enz.2021.06.003   
2021 Wang X, Hu C, Ye W, Wang J, Dong X, Xu J, Li X, Zhang M, Lu H, Zhang F, Wu W, Dai S, Wang HW, Chen Z. Structure of Rift Valley fever virus RNA-dependent RNA polymerase. Journal of Virology. JVI0171321. PMID 34787453 DOI: 10.1128/JVI.01713-21   
2021 Bevilacqua PC, Williams AM, Chou HL, Assmann S. RNA Multimerization as an Organizing Force for Liquid-Liquid Phase Separation. Rna (New York, N.Y.). PMID 34706977 DOI: 10.1261/rna.078999.121   
2021 Taghvimi S, Abbaszadeh S, Banan FB, Fard ES, Jamali Z, Najafabadi MA, Savardashtaki A, Movahedpour A. LncRNAs roles in Chemoresistance of Cancer cells. Current Molecular Medicine. PMID 34711162 DOI: 10.2174/1566524021666211027090515   
2021 Chan D, Feng C, England WE, Wyman D, Flynn RA, Wang X, Shi Y, Mortazavi A, Spitale RC. Diverse functional elements in RNA predicted transcriptome-wide by orthogonal RNA structure probing. Nucleic Acids Research. PMID 34634799 DOI: 10.1093/nar/gkab885   
2021 Lan Y, Su J, Xue Y, Zeng L, Cheng X, Zeng L. Analysing a Novel RNA-Binding-Protein-Related Prognostic Signature Highly Expressed in Breast Cancer. Journal of Healthcare Engineering. 2021: 9174055. PMID 34707800 DOI: 10.1155/2021/9174055   
2021 Zhang Y, Jiang W, Li Y, Jin X, Yang X, Zhang P, Jiang W, Yin B. Fast evolution of SARS-CoV-2 driven by deamination systems in hosts. Future Virology. 16: 587-590. PMID 34721652 DOI: 10.2217/fvl-2021-0181   
2021 Shatoff E, Bundschuh R. dsRBPBind: Modeling the effect of RNA secondary structure on double stranded RNA-protein binding. Bioinformatics (Oxford, England). PMID 34668517 DOI: 10.1093/bioinformatics/btab724   
2021 Li L, Luo H, Lim DH, Han L, Li Y, Fu XD, Qi Y. Global profiling of RNA-chromatin interactions reveals co-regulatory gene expression networks in Arabidopsis. Nature Plants. 7: 1364-1378. PMID 34650265 DOI: 10.1038/s41477-021-01004-x   
2021 Harrington C, Sun H, Jeffries-Miles S, Gerloff N, Mandelbaum M, Pang H, Collins N, Burns CC, Vega E. Culture-Independent Detection of Poliovirus in Stool Samples by Direct RNA Extraction. Microbiology Spectrum. e0066821. PMID 34756088 DOI: 10.1128/Spectrum.00668-21   
2021 Luige O, Bose PP, Stulz R, Steunenberg P, Brun O, Andersson S, Murtola M, Strömberg R. Zn-Dependent peptide nucleic acid-based artificial ribonucleases with unprecedented efficiency and specificity. Chemical Communications (Cambridge, England). PMID 34590632 DOI: 10.1039/d1cc04383h   
2021 Shi L, Zhang L, Wang L, Liu X, Gao H, Hou X, Zhao F, Yan H, Cai W, Wang L. Identifying long non-coding RNAs and characterizing their functional roles in swine mammary gland from colostrogenesis to lactogenesis. Animal Bioscience. PMID 34727649 DOI: 10.5713/ab.21.0308   
2021 Zhao EM, Mao AS, de Puig H, Zhang K, Tippens ND, Tan X, Ran FA, Han I, Nguyen PQ, Chory EJ, Hua TY, Ramesh P, Thompson DB, Oh CY, Zigon ES, et al. RNA-responsive elements for eukaryotic translational control. Nature Biotechnology. PMID 34711989 DOI: 10.1038/s41587-021-01068-2   
2021 Zhang Z, Chen T, Chen HX, Xie YY, Chen LQ, Zhao YL, Liu BD, Jin L, Zhang W, Liu C, Ma DZ, Chai GS, Zhang Y, Zhao WS, Ng WH, et al. Systematic calibration of epitranscriptomic maps using a synthetic modification-free RNA library. Nature Methods. PMID 34594034 DOI: 10.1038/s41592-021-01280-7   
2021 Yu CH, Kabza AM, Sczepanski JT. Assembly of long L-RNA by native RNA ligation. Chemical Communications (Cambridge, England). PMID 34550128 DOI: 10.1039/d1cc04296c