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Patrick S. Varilly, Ph.D. - Publications

Affiliations: 
2011 Physics University of California, Berkeley, Berkeley, CA, United States 
Area:
statistical mechanics
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13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Varilly P, Willard AP, Kirkegaard JB, Knowles TP, Chandler D. Intra-chain organisation of hydrophobic residues controls inter-chain aggregation rates of amphiphilic polymers. The Journal of Chemical Physics. 146: 135102. PMID 28390364 DOI: 10.1063/1.4977932  0.56
2016 van Dijk E, Varilly P, Knowles TP, Frenkel D, Abeln S. Consistent Treatment of Hydrophobicity in Protein Lattice Models Accounts for Cold Denaturation. Physical Review Letters. 116: 078101. PMID 26943560 DOI: 10.1103/Physrevlett.116.078101  0.378
2014 Angioletti-Uberti S, Varilly P, Mognetti BM, Frenkel D. Mobile linkers on DNA-coated colloids: valency without patches. Physical Review Letters. 113: 128303. PMID 25279648 DOI: 10.1103/Physrevlett.113.128303  0.309
2014 Di Michele L, Mognetti BM, Yanagishima T, Varilly P, Ruff Z, Frenkel D, Eiser E. Effect of inert tails on the thermodynamics of DNA hybridization. Journal of the American Chemical Society. 136: 6538-41. PMID 24750023 DOI: 10.1021/Ja500027V  0.3
2014 Martinez-Veracoechea FJ, Mognetti BM, Angioletti-Uberti S, Varilly P, Frenkel D, Dobnikar J. Designing stimulus-sensitive colloidal walkers. Soft Matter. 10: 3463-70. PMID 24647520 DOI: 10.1039/C3Sm53096E  0.308
2013 Angioletti-Uberti S, Varilly P, Mognetti BM, Tkachenko AV, Frenkel D. Communication: a simple analytical formula for the free energy of ligand-receptor-mediated interactions. The Journal of Chemical Physics. 138: 021102. PMID 23320658 DOI: 10.1063/1.4775806  0.323
2013 Varilly P, Chandler D. Water evaporation: a transition path sampling study. The Journal of Physical Chemistry. B. 117: 1419-28. PMID 23294322 DOI: 10.1021/Jp310070Y  0.508
2012 Varilly P, Angioletti-Uberti S, Mognetti BM, Frenkel D. A general theory of DNA-mediated and other valence-limited colloidal interactions. The Journal of Chemical Physics. 137: 094108. PMID 22957556 DOI: 10.1063/1.4748100  0.333
2012 Patel AJ, Varilly P, Jamadagni SN, Hagan MF, Chandler D, Garde S. Sitting at the edge: how biomolecules use hydrophobicity to tune their interactions and function. The Journal of Physical Chemistry. B. 116: 2498-503. PMID 22235927 DOI: 10.1021/Jp2107523  0.595
2011 Patel AJ, Varilly P, Chandler D, Garde S. Quantifying density fluctuations in volumes of all shapes and sizes using indirect umbrella sampling. Journal of Statistical Physics. 145: 265-275. PMID 22184480 DOI: 10.1007/S10955-011-0269-9  0.505
2011 Patel AJ, Varilly P, Jamadagni SN, Acharya H, Garde S, Chandler D. Extended surfaces modulate hydrophobic interactions of neighboring solutes. Proceedings of the National Academy of Sciences of the United States of America. 108: 17678-83. PMID 21987795 DOI: 10.1073/Pnas.1110703108  0.545
2011 Varilly P, Patel AJ, Chandler D. An improved coarse-grained model of solvation and the hydrophobic effect. The Journal of Chemical Physics. 134: 074109. PMID 21341830 DOI: 10.1063/1.3532939  0.489
2010 Patel AJ, Varilly P, Chandler D. Fluctuations of water near extended hydrophobic and hydrophilic surfaces. The Journal of Physical Chemistry. B. 114: 1632-7. PMID 20058869 DOI: 10.1021/Jp909048F  0.553
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