| Year |
Citation |
Score |
| 2023 |
Bosch JA, Keith N, Escobedo F, Fisher WW, LaGraff JT, Rabasco J, Wan KH, Weiszmann R, Hu Y, Kondo S, Brown JB, Perrimon N, Celniker SE. Molecular and functional characterization of the Drosophila melanogaster conserved smORFome. Cell Reports. 42: 113311. PMID 37889754 DOI: 10.1016/j.celrep.2023.113311 |
0.326 |
|
| 2023 |
Fisher WW, Hammonds AS, Weiszmann R, Booth BW, Gevirtzman L, Patton J, Kubo C, Waterston RH, Celniker SE. A modERN Resource: Identification of Drosophila Transcription Factor candidate target genes using RNAi. Genetics. PMID 36652461 DOI: 10.1093/genetics/iyad004 |
0.328 |
|
| 2019 |
Lee H, McManus CJ, Cho DY, Eaton M, Renda F, Somma MP, Cherbas L, May G, Powell S, Zhang D, Zhan L, Resch A, Andrews J, Celniker SE, Cherbas P, et al. Correction to: DNA copy number evolution in Drosophila cell lines. Genome Biology. 20: 53. PMID 30857560 DOI: 10.1186/S13059-019-1668-5 |
0.512 |
|
| 2018 |
Parra M, Booth BW, Weiszmann R, Yee BA, Yeo GW, Brown JB, Celniker SE, Conboy JG. An important class of intron retention events in human erythroblasts is regulated by cryptic exons proposed to function as splicing decoys. Rna (New York, N.Y.). PMID 29959282 DOI: 10.1261/Rna.066951.118 |
0.339 |
|
| 2017 |
Kudron MM, Victorsen A, Gevirtzman L, Hillier LW, Fisher WW, Vafeados D, Kirkey M, Hammonds AS, Gersch J, Ammouri H, Wall ML, Moran J, Steffen D, Szynkarek M, Seabrook-Sturgis S, ... ... Celniker SE, et al. The modERN Resource: Genome-Wide Binding Profiles for Hundreds of Drosophila and Caenorhabditis elegans Transcription Factors. Genetics. PMID 29284660 DOI: 10.1534/Genetics.117.300657 |
0.304 |
|
| 2016 |
Stoiber M, Celniker S, Cherbas L, Brown B, Cherbas P. Diverse Hormone Response Networks in 41 Independent Drosophila Cell Lines. G3 (Bethesda, Md.). PMID 26772746 DOI: 10.1534/G3.115.023366 |
0.404 |
|
| 2015 |
Stoiber MH, Olson S, May GE, Duff MO, Manent J, Obar R, Guruharsha K, Artavanis-Tsakonas S, Brown JB, Graveley BR, Celniker SE. Extensive cross-regulation of post-transcriptional regulatory networks in Drosophila. Genome Research. PMID 26294687 DOI: 10.1101/Gr.182675.114 |
0.577 |
|
| 2015 |
Brooks AN, Duff MO, May G, Yang L, Bolisetty M, Landolin J, Wan K, Sandler J, Celniker SE, Graveley BR, Brenner SE. Regulation of alternative splicing in Drosophila by 56 RNA binding proteins. Genome Research. PMID 26294686 DOI: 10.1101/Gr.192518.115 |
0.579 |
|
| 2015 |
Brown JB, Celniker SE. Lessons from modENCODE. Annual Review of Genomics and Human Genetics. PMID 26133010 DOI: 10.1146/Annurev-Genom-090413-025448 |
0.351 |
|
| 2015 |
Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, Plocik A, Celniker SE, Graveley BR. Genome-wide identification of zero nucleotide recursive splicing in Drosophila. Nature. 521: 376-9. PMID 25970244 DOI: 10.1038/Nature14475 |
0.661 |
|
| 2015 |
Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, ... ... Celniker SE, et al. The Release 6 reference sequence of the Drosophila melanogaster genome. Genome Research. 25: 445-58. PMID 25589440 DOI: 10.1101/Gr.185579.114 |
0.369 |
|
| 2014 |
Kim KE, Peluso P, Babayan P, Yeadon PJ, Yu C, Fisher WW, Chin CS, Rapicavoli NA, Rank DR, Li J, Catcheside DE, Celniker SE, Phillippy AM, Bergman CM, Landolin JM. Long-read, whole-genome shotgun sequence data for five model organisms. Scientific Data. 1: 140045. PMID 25977796 DOI: 10.1038/Sdata.2014.45 |
0.603 |
|
| 2014 |
Westholm JO, Miura P, Olson S, Shenker S, Joseph B, Sanfilippo P, Celniker SE, Graveley BR, Lai EC. Genome-wide analysis of drosophila circular RNAs reveals their structural and sequence properties and age-dependent neural accumulation. Cell Reports. 9: 1966-80. PMID 25544350 DOI: 10.1016/J.Celrep.2014.10.062 |
0.629 |
|
| 2014 |
Lee H, McManus CJ, Cho DY, Eaton M, Renda F, Somma MP, Cherbas L, May G, Powell S, Zhang D, Zhan L, Resch A, Andrews J, Celniker SE, Cherbas P, et al. DNA copy number evolution in Drosophila cell lines. Genome Biology. 15: R70. PMID 25262759 DOI: 10.1186/Gb-2014-15-8-R70 |
0.574 |
|
| 2014 |
Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, ... ... Celniker SE, et al. Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8. PMID 25164755 DOI: 10.1038/Nature13424 |
0.655 |
|
| 2014 |
Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, ... ... Celniker SE, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/Gr.159384.113 |
0.665 |
|
| 2014 |
Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, ... ... Celniker SE, et al. Diversity and dynamics of the Drosophila transcriptome. Nature. 512: 393-9. PMID 24670639 DOI: 10.1038/Nature12962 |
0.638 |
|
| 2014 |
Boley N, Wan KH, Bickel PJ, Celniker SE. Navigating and mining modENCODE data. Methods (San Diego, Calif.). 68: 38-47. PMID 24636835 DOI: 10.1016/J.Ymeth.2014.03.007 |
0.366 |
|
| 2014 |
Boley N, Stoiber MH, Booth BW, Wan KH, Hoskins RA, Bickel PJ, Celniker SE, Brown JB. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Nature Biotechnology. 32: 341-6. PMID 24633242 DOI: 10.1038/Nbt.2850 |
0.406 |
|
| 2013 |
Enuameh MS, Asriyan Y, Richards A, Christensen RG, Hall VL, Kazemian M, Zhu C, Pham H, Cheng Q, Blatti C, Brasefield JA, Basciotta MD, Ou J, McNulty JC, Zhu LJ, ... Celniker SE, et al. Global analysis of Drosophila Cysâ‚‚-Hisâ‚‚ zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Research. 23: 928-40. PMID 23471540 DOI: 10.1101/Gr.151472.112 |
0.345 |
|
| 2013 |
Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, et al. Errata to Global patterns of tissue-specific alternative polyadenylation in drosophila [Cell Reports, 1 (2012) 277-289] Cell Reports. 3: 969. DOI: 10.1016/j.celrep.2013.03.022 |
0.52 |
|
| 2012 |
Fisher WW, Li JJ, Hammonds AS, Brown JB, Pfeiffer BD, Weiszmann R, MacArthur S, Thomas S, Stamatoyannopoulos JA, Eisen MB, Bickel PJ, Biggin MD, Celniker SE. DNA regions bound at low occupancy by transcription factors do not drive patterned reporter gene expression in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 109: 21330-5. PMID 23236164 DOI: 10.1073/Pnas.1209589110 |
0.395 |
|
| 2012 |
Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, et al. Global patterns of tissue-specific alternative polyadenylation in Drosophila. Cell Reports. 1: 277-89. PMID 22685694 DOI: 10.1016/J.Celrep.2012.01.001 |
0.612 |
|
| 2011 |
Hens K, Feuz JD, Isakova A, Iagovitina A, Massouras A, Bryois J, Callaerts P, Celniker SE, Deplancke B. Automated protein-DNA interaction screening of Drosophila regulatory elements. Nature Methods. 8: 1065-70. PMID 22037703 DOI: 10.1038/Nmeth.1763 |
0.317 |
|
| 2011 |
Thomas S, Li XY, Sabo PJ, Sandstrom R, Thurman RE, Canfield TK, Giste E, Fisher W, Hammonds A, Celniker SE, Biggin MD, Stamatoyannopoulos JA. Dynamic reprogramming of chromatin accessibility during Drosophila embryo development. Genome Biology. 12: R43. PMID 21569360 DOI: 10.1186/Gb-2011-12-5-R43 |
0.317 |
|
| 2011 |
Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, ... ... Celniker SE, et al. The developmental transcriptome of Drosophila melanogaster. Nature. 471: 473-9. PMID 21179090 DOI: 10.1038/Nature09715 |
0.672 |
|
| 2011 |
Cherbas L, Willingham A, Zhang D, Yang L, Zou Y, Eads BD, Carlson JW, Landolin JM, Kapranov P, Dumais J, Samsonova A, Choi JH, Roberts J, Davis CA, Tang H, ... ... Celniker SE, et al. The transcriptional diversity of 25 Drosophila cell lines. Genome Research. 21: 301-14. PMID 21177962 DOI: 10.1101/Gr.112961.110 |
0.572 |
|
| 2011 |
Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, ... ... Celniker SE, et al. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Research. 21: 182-92. PMID 21177961 DOI: 10.1101/Gr.112466.110 |
0.663 |
|
| 2010 |
Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, ... ... Celniker SE, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/Science.1198374 |
0.668 |
|
| 2010 |
Hoang ML, Tan FJ, Lai DC, Celniker SE, Hoskins RA, Dunham MJ, Zheng Y, Koshland D. Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination. Plos Genetics. 6: e1001228. PMID 21151956 DOI: 10.1371/Journal.Pgen.1001228 |
0.32 |
|
| 2010 |
Kazemian M, Blatti C, Richards A, McCutchan M, Wakabayashi-Ito N, Hammonds AS, Celniker SE, Kumar S, Wolfe SA, Brodsky MH, Sinha S. Quantitative analysis of the Drosophila segmentation regulatory network using pattern generating potentials. Plos Biology. 8. PMID 20808951 DOI: 10.1371/Journal.Pbio.1000456 |
0.348 |
|
| 2009 |
Ho MC, Johnsen H, Goetz SE, Schiller BJ, Bae E, Tran DA, Shur AS, Allen JM, Rau C, Bender W, Fisher WW, Celniker SE, Drewell RA. Functional evolution of cis-regulatory modules at a homeotic gene in Drosophila. Plos Genetics. 5: e1000709. PMID 19893611 DOI: 10.1371/Journal.Pgen.1000709 |
0.758 |
|
| 2009 |
Celniker SE, Dillon LA, Gerstein MB, Gunsalus KC, Henikoff S, Karpen GH, Kellis M, Lai EC, Lieb JD, MacAlpine DM, Micklem G, Piano F, Snyder M, Stein L, White KP, et al. Unlocking the secrets of the genome. Nature. 459: 927-30. PMID 19536255 DOI: 10.1038/459927A |
0.307 |
|
| 2009 |
Drewell RA, Ho MC, Goetz SE, Schiller BJ, Bae E, Allen JM, Bender W, Fisher W, Celniker SE, Drewell RA. Decoding embryonic cis-regulatory modules at Drosophila Hox genes Developmental Biology. 331: 400. DOI: 10.1016/J.Ydbio.2009.05.059 |
0.68 |
|
| 2008 |
Li XY, MacArthur S, Bourgon R, Nix D, Pollard DA, Iyer VN, Hechmer A, Simirenko L, Stapleton M, Luengo Hendriks CL, Chu HC, Ogawa N, Inwood W, Sementchenko V, Beaton A, ... ... Celniker SE, et al. Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm. Plos Biology. 6: e27. PMID 18271625 DOI: 10.1371/Journal.Pbio.0060027 |
0.712 |
|
| 2008 |
Li XY, MacArthur S, Bourgon R, Nix D, Pollard DA, Iyer VN, Hechmer A, Simirenko L, Stapleton M, Luengo Hendriks CL, Hou CC, Ogawa N, Inwood W, Sementchenko V, Beaton A, ... ... Celniker SE, et al. Correction: Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm (PLoS Biology (2008) 6,2 (e27) DOI: 10.1371/journal.pbio.0060027) Plos Biology. 6: 1600. DOI: 10.1371/Journal.Pbio.0060190 |
0.611 |
|
| 2007 |
Hudson SG, Garrett MJ, Carlson JW, Micklem G, Celniker SE, Goldstein ES, Newfeld SJ. Phylogenetic and genomewide analyses suggest a functional relationship between kayak, the Drosophila fos homolog, and fig, a predicted protein phosphatase 2c nested within a kayak intron. Genetics. 177: 1349-61. PMID 18039871 DOI: 10.1534/Genetics.107.071670 |
0.316 |
|
| 2007 |
Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, ... ... Celniker SE, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/Nature06340 |
0.622 |
|
| 2007 |
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Celniker SE, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341 |
0.76 |
|
| 2007 |
Lin MF, Carlson JW, Crosby MA, Matthews BB, Yu C, Park S, Wan KH, Schroeder AJ, Gramates LS, St Pierre SE, Roark M, Wiley KL, Kulathinal RJ, Zhang P, Myrick KV, ... ... Celniker SE, et al. Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes. Genome Research. 17: 1823-36. PMID 17989253 DOI: 10.1101/Gr.6679507 |
0.646 |
|
| 2007 |
Tomancak P, Berman BP, Beaton A, Weiszmann R, Kwan E, Hartenstein V, Celniker SE, Rubin GM. Global analysis of patterns of gene expression during Drosophila embryogenesis. Genome Biology. 8: R145. PMID 17645804 DOI: 10.1186/Gb-2007-8-7-R145 |
0.642 |
|
| 2007 |
Celniker SE, Drewell RA. Chromatin looping mediates boundary element promoter interactions. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 29: 7-10. PMID 17187351 DOI: 10.1002/bies.20520 |
0.685 |
|
| 2007 |
Smith CD, Edgar RC, Yandell MD, Smith DR, Celniker SE, Myers EW, Karpen GH. Improved repeat identification and masking in Dipterans. Gene. 389: 1-9. PMID 17137733 DOI: 10.1016/J.Gene.2006.09.011 |
0.425 |
|
| 2007 |
Celniker SE, Lewis EB. Molecular basis of transabdominal - A sexually dimorphic mutant of the bithorax complex of Drosophila Genes, Development, and Cancer: the Life and Work of Edward B. Lewis. 383-391. DOI: 10.1007/978-1-4020-6345-9_17 |
0.546 |
|
| 2006 |
Wan KH, Yu C, George RA, Carlson JW, Hoskins RA, Svirskas R, Stapleton M, Celniker SE. High-throughput plasmid cDNA library screening. Nature Protocols. 1: 624-32. PMID 17406289 DOI: 10.1038/Nprot.2006.90 |
0.358 |
|
| 2006 |
Stapleton M, Carlson JW, Celniker SE. RNA editing in Drosophila melanogaster: New targets and functional consequences. Rna (New York, N.Y.). 12: 1922-32. PMID 17018572 DOI: 10.1261/rna.254306 |
0.35 |
|
| 2006 |
George JA, DeBaryshe PG, Traverse KL, Celniker SE, Pardue ML. Genomic organization of the Drosophila telomere retrotransposable elements. Genome Research. 16: 1231-40. PMID 16963706 DOI: 10.1101/gr.5348806 |
0.304 |
|
| 2005 |
Hoskins RA, Stapleton M, George RA, Yu C, Wan KH, Carlson JW, Celniker SE. Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). Nucleic Acids Research. 33: e185. PMID 16326860 DOI: 10.1093/Nar/Gni184 |
0.361 |
|
| 2005 |
Chen L, Lullo DJ, Ma E, Celniker SE, Rio DC, Doudna JA. Identification and analysis of U5 snRNA variants in Drosophila. Rna (New York, N.Y.). 11: 1473-7. PMID 16199758 DOI: 10.1261/Rna.2141505 |
0.343 |
|
| 2005 |
Tupy JL, Bailey AM, Dailey G, Evans-Holm M, Siebel CW, Misra S, Celniker SE, Rubin GM. Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 102: 5495-500. PMID 15809421 DOI: 10.1073/pnas.0501422102 |
0.45 |
|
| 2005 |
Yandell M, Bailey AM, Misra S, Shu S, Wiel C, Evans-Holm M, Celniker SE, Rubin GM. A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Proceedings of the National Academy of Sciences of the United States of America. 102: 1566-71. PMID 15668397 DOI: 10.1073/Pnas.0409421102 |
0.387 |
|
| 2005 |
Bergman CM, Carlson JW, Celniker SE. Drosophila DNase I footprint database: a systematic genome annotation of transcription factor binding sites in the fruitfly, Drosophila melanogaster. Bioinformatics (Oxford, England). 21: 1747-9. PMID 15572468 DOI: 10.1093/Bioinformatics/Bti173 |
0.636 |
|
| 2004 |
Duncan I, Celniker SE. In memoriam: Edward B. Lewis (1918-2004). Developmental Cell. 7: 487-9. PMID 15469837 DOI: 10.1016/j.devcel.2004.09.005 |
0.372 |
|
| 2004 |
Berman BP, Pfeiffer BD, Laverty TR, Salzberg SL, Rubin GM, Eisen MB, Celniker SE. Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura. Genome Biology. 5: R61. PMID 15345045 DOI: 10.1186/Gb-2004-5-9-R61 |
0.67 |
|
| 2004 |
Pollard DA, Bergman CM, Stoye J, Celniker SE, Eisen MB. Correction: Benchmarking tools for the alignment of functional noncoding DNA. Bmc Bioinformatics. 5: 73. PMID 15186509 DOI: 10.1186/1471-2105-5-73 |
0.697 |
|
| 2004 |
Pollard DA, Bergman CM, Stoye J, Celniker SE, Eisen MB. Benchmarking tools for the alignment of functional noncoding DNA. Bmc Bioinformatics. 5: 6. PMID 14736341 DOI: 10.1186/1471-2105-5-6 |
0.746 |
|
| 2003 |
Celniker SE, Rubin GM. The Drosophila melanogaster genome. Annual Review of Genomics and Human Genetics. 4: 89-117. PMID 14527298 DOI: 10.1146/annurev.genom.4.070802.110323 |
0.398 |
|
| 2003 |
Lewis EB, Pfeiffer BD, Mathog DR, Celniker SE. Evolution of the homeobox complex in the Diptera. Current Biology : Cb. 13: R587-8. PMID 12906807 DOI: 10.1007/978-1-4020-6345-9_20 |
0.59 |
|
| 2003 |
Carvalho AB, Vibranovski MD, Carlson JW, Celniker SE, Hoskins RA, Rubin GM, Sutton GG, Adams MD, Myers EW, Clark AG. Y chromosome and other heterochromatic sequences of the Drosophila melanogaster genome: how far can we go? Genetica. 117: 227-37. PMID 12723702 DOI: 10.1023/A:1022900313650 |
0.427 |
|
| 2002 |
Tomancak P, Beaton A, Weiszmann R, Kwan E, Shu S, Lewis SE, Richards S, Ashburner M, Hartenstein V, Celniker SE, Rubin GM. Systematic determination of patterns of gene expression during Drosophila embryogenesis. Genome Biology. 3: RESEARCH0088. PMID 12537577 DOI: 10.1186/Gb-2002-3-12-Research0088 |
0.58 |
|
| 2002 |
Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, ... ... Celniker SE, et al. Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome. Genome Biology. 3: RESEARCH0086. PMID 12537575 DOI: 10.1186/Gb-2002-3-12-Research0086 |
0.649 |
|
| 2002 |
Hoskins RA, Smith CD, Carlson JW, Carvalho AB, Halpern A, Kaminker JS, Kennedy C, Mungall CJ, Sullivan BA, Sutton GG, Yasuhara JC, Wakimoto BT, Myers EW, Celniker SE, Rubin GM, et al. Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. Genome Biology. 3: RESEARCH0085. PMID 12537574 DOI: 10.1186/Gb-2002-3-12-Research0085 |
0.435 |
|
| 2002 |
Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE. The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. Genome Biology. 3: RESEARCH0084. PMID 12537573 DOI: 10.1186/Gb-2002-3-12-Research0084 |
0.698 |
|
| 2002 |
Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, ... ... Celniker SE, et al. Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. Genome Biology. 3: RESEARCH0083. PMID 12537572 DOI: 10.1186/Gb-2002-3-12-Research0083 |
0.795 |
|
| 2002 |
Stapleton M, Carlson J, Brokstein P, Yu C, Champe M, George R, Guarin H, Kronmiller B, Pacleb J, Park S, Wan K, Rubin GM, Celniker SE. A Drosophila full-length cDNA resource. Genome Biology. 3: RESEARCH0080. PMID 12537569 DOI: 10.1186/Gb-2002-3-12-Research0080 |
0.431 |
|
| 2002 |
Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, Patel S, Adams M, Champe M, Dugan SP, Frise E, Hodgson A, George RA, Hoskins RA, Laverty T, Muzny DM, et al. Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biology. 3: RESEARCH0079. PMID 12537568 DOI: 10.1186/Gb-2002-3-12-Research0079 |
0.347 |
|
| 2002 |
Stapleton M, Liao G, Brokstein P, Hong L, Carninci P, Shiraki T, Hayashizaki Y, Champe M, Pacleb J, Wan K, Yu C, Carlson J, George R, Celniker S, Rubin GM. The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes. Genome Research. 12: 1294-300. PMID 12176937 DOI: 10.1101/Gr.269102 |
0.503 |
|
| 2002 |
Berman BP, Nibu Y, Pfeiffer BD, Tomancak P, Celniker SE, Levine M, Rubin GM, Eisen MB. Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome. Proceedings of the National Academy of Sciences of the United States of America. 99: 757-62. PMID 11805330 DOI: 10.1073/Pnas.231608898 |
0.671 |
|
| 2000 |
Celniker SE. The Drosophila genome. Current Opinion in Genetics & Development. 10: 612-6. PMID 11088010 DOI: 10.1016/S0959-437X(00)00140-4 |
0.418 |
|
| 2000 |
Hoskins RA, Nelson CR, Berman BP, Laverty TR, George RA, Ciesiolka L, Naeemuddin M, Arenson AD, Durbin J, David RG, Tabor PE, Bailey MR, DeShazo DR, Catanese J, Mammoser A, ... ... Celniker SE, et al. A BAC-based physical map of the major autosomes of Drosophila melanogaster. Science (New York, N.Y.). 287: 2271-4. PMID 10731150 DOI: 10.1126/Science.287.5461.2271 |
0.616 |
|
| 2000 |
Rubin GM, Yandell MD, Wortman JR, Gabor Miklos GL, Nelson CR, Hariharan IK, Fortini ME, Li PW, Apweiler R, Fleischmann W, Cherry JM, Henikoff S, Skupski MP, Misra S, Ashburner M, ... ... Celniker SE, et al. Comparative genomics of the eukaryotes. Science (New York, N.Y.). 287: 2204-15. PMID 10731134 DOI: 10.1126/Science.287.5461.2204 |
0.686 |
|
| 2000 |
Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, et al. The genome sequence of Drosophila melanogaster. Science (New York, N.Y.). 287: 2185-95. PMID 10731132 DOI: 10.1126/Science.287.5461.2185 |
0.782 |
|
| 1999 |
Ashburner M, Misra S, Roote J, Lewis SE, Blazej R, Davis T, Doyle C, Galle R, George R, Harris N, Hartzell G, Harvey D, Hong L, Houston K, Hoskins R, ... ... Celniker S, et al. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Genetics. 153: 179-219. PMID 10471707 |
0.657 |
|
| 1995 |
Lewis EB, Knafels JD, Mathog DR, Celniker SE. Sequence analysis of the cis-regulatory regions of the bithorax complex of Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 92: 8403-7. PMID 7667302 DOI: 10.1007/978-1-4020-6345-9_18 |
0.668 |
|
| 1995 |
Martin CH, Mayeda CA, Davis CA, Ericsson CL, Knafels JD, Mathog DR, Celniker SE, Lewis EB, Palazzolo MJ. Complete sequence of the bithorax complex of Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 92: 8398-402. PMID 7667301 DOI: 10.1073/pnas.92.18.8398 |
0.684 |
|
| 1994 |
Fernandes J, Celniker SE, Lewis EB, VijayRaghavan K. Muscle development in the four-winged Drosophila and the role of the Ultrabithorax gene. Current Biology : Cb. 4: 957-64. PMID 7874495 DOI: 10.1016/S0960-9822(00)00219-0 |
0.599 |
|
| 1993 |
Celniker SE, Lewis EB. Molecular basis of transabdominal--a sexually dimorphic mutant of the bithorax complex of Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 90: 1566-70. PMID 8094560 DOI: 10.1073/pnas.90.4.1566 |
0.636 |
|
| 1990 |
Celniker SE, Sharma S, Keelan DJ, Lewis EB. The molecular genetics of the bithorax complex of Drosophila: cis-regulation in the Abdominal-B domain. The Embo Journal. 9: 4277-86. PMID 2265608 |
0.611 |
|
| 1989 |
Celniker SE, Keelan DJ, Lewis EB. The molecular genetics of the bithorax complex of Drosophila: characterization of the products of the Abdominal-B domain. Genes & Development. 3: 1424-36. PMID 2575066 |
0.628 |
|
| 1987 |
Celniker SE, Lewis EB. Transabdominal, a dominant mutant of the Bithorax Complex, produces a sexually dimorphic segmental transformation in Drosophila. Genes & Development. 1: 111-23. PMID 3678820 DOI: 10.1007/978-1-4020-6345-9_16 |
0.576 |
|
| 1985 |
Karch F, Weiffenbach B, Peifer M, Bender W, Duncan I, Celniker S, Crosby M, Lewis EB. The abdominal region of the bithorax complex. Cell. 43: 81-96. PMID 3935319 DOI: 10.1007/978-1-4020-6345-9_15 |
0.671 |
|
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