Alex M. Plocik, Ph.D. - Publications

Affiliations: 
2011 Biochemistry and Molecular Biology University of California, San Francisco, San Francisco, CA 

8/18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, Plocik A, Celniker SE, Graveley BR. Genome-wide identification of zero nucleotide recursive splicing in Drosophila. Nature. 521: 376-9. PMID 25970244 DOI: 10.1038/Nature14475  0.436
2013 Braunschweig U, Gueroussov S, Plocik AM, Graveley BR, Blencowe BJ. Dynamic integration of splicing within gene regulatory pathways. Cell. 152: 1252-69. PMID 23498935 DOI: 10.1016/J.Cell.2013.02.034  0.39
2012 Plocik AM, Guthrie C. Diverse forms of RPS9 splicing are part of an evolving autoregulatory circuit. Plos Genetics. 8: e1002620. PMID 22479208 DOI: 10.1371/Journal.Pgen.1002620  0.512
2012 Plocik AM, Guthrie C. Diverse forms of RPS9 splicing are part of an evolving autoregulatory circuit Plos Genetics. 8. DOI: 10.1371/journal.pgen.1002620  0.403
2010 Huff JT, Plocik AM, Guthrie C, Yamamoto KR. Reciprocal intronic and exonic histone modification regions in humans Nature Structural and Molecular Biology. 17: 1495-1499. PMID 21057525 DOI: 10.1038/Nsmb.1924  0.442
2008 Radwan O, Gandhi S, Heesacker A, Whitaker B, Taylor C, Plocik A, Kesseli R, Kozik A, Michelmore RW, Knapp SJ. Genetic diversity and genomic distribution of homologs encoding NBS-LRR disease resistance proteins in sunflower. Molecular Genetics and Genomics : Mgg. 280: 111-25. PMID 18553106 DOI: 10.1007/S00438-008-0346-1  0.34
2007 Alexander MK, Mlynarczyk-Evans S, Royce-Tolland M, Plocik A, Kalantry S, Magnuson T, Panning B. Differences between homologous alleles of olfactory receptor genes require the Polycomb Group protein Eed. The Journal of Cell Biology. 179: 269-76. PMID 17954609 DOI: 10.1083/Jcb.200706053  0.365
2004 Plocik A, Layden J, Kesseli R. Comparative analysis of NBS domain sequences of NBS-LRR disease resistance genes from sunflower, lettuce, and chicory Molecular Phylogenetics and Evolution. 31: 153-163. PMID 15019616 DOI: 10.1016/S1055-7903(03)00274-4  0.37
Low-probability matches (unlikely to be authored by this person)
2013 Plocik AM, Graveley BR. New insights from existing sequence data: generating breakthroughs without a pipette. Molecular Cell. 49: 605-17. PMID 23438857 DOI: 10.1016/J.Molcel.2013.01.031  0.3
2014 Germain ND, Chen PF, Plocik AM, Glatt-Deeley H, Brown J, Fink JJ, Bolduc KA, Robinson TM, Levine ES, Reiter LT, Graveley BR, Lalande M, Chamberlain SJ. Gene expression analysis of human induced pluripotent stem cell-derived neurons carrying copy number variants of chromosome 15q11-q13.1. Molecular Autism. 5: 44. PMID 25694803 DOI: 10.1186/2040-2392-5-44  0.297
2016 Chen CY, Plocik A, Anderson NC, Moakley D, Boyi T, Dundes C, Lassiter C, Graveley BR, Grabel L. Transcriptome and in Vitro Differentiation Profile of Human Embryonic Stem Cell Derived NKX2.1-Positive Neural Progenitors. Stem Cell Reviews. PMID 27539622 DOI: 10.1007/S12015-016-9676-2  0.285
2007 Funke BH, Lencz T, Finn CT, DeRosse P, Poznik GD, Plocik AM, Kane J, Rogus J, Malhotra AK, Kucherlapati R. Analysis of TBX1 variation in patients with psychotic and affective disorders. Molecular Medicine (Cambridge, Mass.). 13: 407-14. PMID 17622328 DOI: 10.2119/2006-00119.FUNKE  0.251
2005 Funke B, Malhotra AK, Finn CT, Plocik AM, Lake SL, Lencz T, DeRosse P, Kane JM, Kucherlapati R. COMT genetic variation confers risk for psychotic and affective disorders: a case control study. Behavioral and Brain Functions : Bbf. 1: 19. PMID 16232322 DOI: 10.1186/1744-9081-1-19  0.239
2009 Vassilopoulos S, Esk C, Hoshino S, Funke BH, Chen CY, Plocik AM, Wright WE, Kucherlapati R, Brodsky FM. A role for the CHC22 clathrin heavy-chain isoform in human glucose metabolism. Science (New York, N.Y.). 324: 1192-6. PMID 19478182 DOI: 10.1126/Science.1171529  0.215
2021 Baaijens JA, Zulli A, Ott IM, Petrone ME, Alpert T, Fauver JR, Kalinich CC, Vogels CBF, Breban MI, Duvallet C, McElroy K, Ghaeli N, Imakaev M, Mckenzie-Bennett M, Robison K, ... Plocik A, et al. Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification. Medrxiv : the Preprint Server For Health Sciences. PMID 34494031 DOI: 10.1101/2021.08.31.21262938  0.173
2022 Baaijens JA, Zulli A, Ott IM, Nika I, van der Lugt MJ, Petrone ME, Alpert T, Fauver JR, Kalinich CC, Vogels CBF, Breban MI, Duvallet C, McElroy KA, Ghaeli N, Imakaev M, ... ... Plocik A, et al. Lineage abundance estimation for SARS-CoV-2 in wastewater using transcriptome quantification techniques. Genome Biology. 23: 236. PMID 36348471 DOI: 10.1186/s13059-022-02805-9  0.16
2022 Wegrzyn RD, Appiah GD, Morfino R, Milford SR, Walker AT, Ernst ET, Darrow WW, Li SL, Robison K, MacCannell D, Dai D, Girinathan BP, Hicks AL, Cosca B, Woronoff G, ... Plocik AM, et al. Early detection of SARS-CoV-2 variants using traveler-based genomic surveillance at four US airports, September 2021- January 2022. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 35686436 DOI: 10.1093/cid/ciac461  0.121
2004 Funke B, Finn CT, Plocik AM, Lake S, DeRosse P, Kane JM, Kucherlapati R, Malhotra AK. Association of the DTNBP1 locus with schizophrenia in a U.S. population. American Journal of Human Genetics. 75: 891-8. PMID 15362017 DOI: 10.1086/425279  0.112
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