David C. Fargo, Ph.D. - Publications

Affiliations: 
2000 Duke University, Durham, NC 
Area:
Genetics Cell and Molecular Biology

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lavender CA, Cannady KR, Hoffman JA, Trotter KW, Gilchrist DA, Bennett BD, Burkholder AB, Burd CJ, Fargo DC, Archer TK. Downstream Antisense Transcription Predicts Genomic Features That Define the Specific Chromatin Environment at Mammalian Promoters. Plos Genetics. 12: e1006224. PMID 27487356 DOI: 10.1371/journal.pgen.1006224  0.88
2016 Bunch H, Lawney BP, Burkholder A, Ma D, Zheng X, Motola S, Fargo DC, Levine SS, Wang YE, Hu G. RNA polymerase II promoter-proximal pausing in mammalian long non-coding genes. Genomics. PMID 27432546 DOI: 10.1016/j.ygeno.2016.07.003  0.88
2016 Zhou B, Wang L, Zhang S, Bennett BD, He F, Zhang Y, Xiong C, Han L, Diao L, Li P, Fargo DC, Cox AD, Hu G. INO80 governs superenhancer-mediated oncogenic transcription and tumor growth in melanoma. Genes & Development. 30: 1440-53. PMID 27340176 DOI: 10.1101/gad.277178.115  0.88
2016 Borkent M, Bennett BD, Lackford B, Bar-Nur O, Brumbaugh J, Wang L, Du Y, Fargo DC, Apostolou E, Cheloufi S, Maherali N, Elledge SJ, Hu G, Hochedlinger K. A Serial shRNA Screen for Roadblocks to Reprogramming Identifies the Protein Modifier SUMO2. Stem Cell Reports. PMID 26947976 DOI: 10.1016/j.stemcr.2016.02.004  0.88
2015 Scruggs BS, Gilchrist DA, Nechaev S, Muse GW, Burkholder A, Fargo DC, Adelman K. Bidirectional Transcription Arises from Two Distinct Hubs of Transcription Factor Binding and Active Chromatin. Molecular Cell. 58: 1101-12. PMID 26028540 DOI: 10.1016/j.molcel.2015.04.006  0.88
2015 Williams LH, Fromm G, Gokey NG, Henriques T, Muse GW, Burkholder A, Fargo DC, Hu G, Adelman K. Pausing of RNA polymerase II regulates mammalian developmental potential through control of signaling networks. Molecular Cell. 58: 311-22. PMID 25773599 DOI: 10.1016/j.molcel.2015.02.003  0.88
2015 Clausen AR, Lujan SA, Burkholder AB, Orebaugh CD, Williams JS, Clausen MF, Malc EP, Mieczkowski PA, Fargo DC, Smith DJ, Kunkel TA. Tracking replication enzymology in vivo by genome-wide mapping of ribonucleotide incorporation. Nature Structural & Molecular Biology. 22: 185-91. PMID 25622295 DOI: 10.1038/nsmb.2957  0.88
2015 Wells ML, Washington OL, Hicks SN, Nobile CJ, Hartooni N, Wilson GM, Zucconi BE, Huang W, Li L, Fargo DC, Blackshear PJ. Post-transcriptional regulation of transcript abundance by a conserved member of the tristetraprolin family in Candida albicans. Molecular Microbiology. 95: 1036-53. PMID 25524641 DOI: 10.1111/mmi.12913  0.88
2014 Lujan SA, Clausen AR, Clark AB, MacAlpine HK, MacAlpine DM, Malc EP, Mieczkowski PA, Burkholder AB, Fargo DC, Gordenin DA, Kunkel TA. Heterogeneous polymerase fidelity and mismatch repair bias genome variation and composition. Genome Research. 24: 1751-64. PMID 25217194 DOI: 10.1101/gr.178335.114  0.88
2014 Wang L, Du Y, Ward JM, Shimbo T, Lackford B, Zheng X, Miao YL, Zhou B, Han L, Fargo DC, Jothi R, Williams CJ, Wade PA, Hu G. INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development. Cell Stem Cell. 14: 575-91. PMID 24792115 DOI: 10.1016/j.stem.2014.02.013  0.88
2013 Wang L, Miao YL, Zheng X, Lackford B, Zhou B, Han L, Yao C, Ward JM, Burkholder A, Lipchina I, Fargo DC, Hochedlinger K, Shi Y, Williams CJ, Hu G. The THO complex regulates pluripotency gene mRNA export and controls embryonic stem cell self-renewal and somatic cell reprogramming. Cell Stem Cell. 13: 676-90. PMID 24315442 DOI: 10.1016/j.stem.2013.10.008  0.88
2012 Core LJ, Waterfall JJ, Gilchrist DA, Fargo DC, Kwak H, Adelman K, Lis JT. Defining the status of RNA polymerase at promoters. Cell Reports. 2: 1025-35. PMID 23062713 DOI: 10.1016/j.celrep.2012.08.034  0.88
2012 Wells ML, Huang W, Li L, Gerrish KE, Fargo DC, Ozsolak F, Blackshear PJ. Posttranscriptional regulation of cell-cell interaction protein-encoding transcripts by Zfs1p in Schizosaccharomyces pombe. Molecular and Cellular Biology. 32: 4206-14. PMID 22907753 DOI: 10.1128/MCB.00325-12  0.88
2011 Saha RN, Wissink EM, Bailey ER, Zhao M, Fargo DC, Hwang JY, Daigle KR, Fenn JD, Adelman K, Dudek SM. Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II. Nature Neuroscience. 14: 848-56. PMID 21623364 DOI: 10.1038/nn.2839  0.88
2011 Colaneri A, Staffa N, Fargo DC, Gao Y, Wang T, Peddada SD, Birnbaumer L. Expanded methyl-sensitive cut counting reveals hypomethylation as an epigenetic state that highlights functional sequences of the genome. Proceedings of the National Academy of Sciences of the United States of America. 108: 9715-20. PMID 21602498 DOI: 10.1073/pnas.1105713108  0.88
2010 Stajich JE, Wilke SK, Ahrén D, Au CH, Birren BW, Borodovsky M, Burns C, Canbäck B, Casselton LA, Cheng CK, Deng J, Dietrich FS, Fargo DC, Farman ML, Gathman AC, et al. Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus). Proceedings of the National Academy of Sciences of the United States of America. 107: 11889-94. PMID 20547848 DOI: 10.1073/pnas.1003391107  0.88
2001 Fargo DC, Boynton JE, Gillham NW. Chloroplast ribosomal protein S7 of Chlamydomonas binds to chloroplast mRNA leader sequences and may be involved in translation initiation. The Plant Cell. 13: 207-18. PMID 11158540 DOI: 10.1105/tpc.13.1.207  0.88
2000 Fargo DC, Hu E, Boynton JE, Gillham NW. Mutations that alter the higher-order structure of its 5' untranslated region affect the stability of chloroplast rps7 mRNA. Molecular & General Genetics : Mgg. 264: 291-9. PMID 11085269  0.88
1999 Fargo DC, Boynton JE, Gillham NW. Mutations altering the predicted secondary structure of a chloroplast 5' untranslated region affect its physical and biochemical properties as well as its ability to promote translation of reporter mRNAs both in the Chlamydomonas reinhardtii chloroplast and in Escherichia coli. Molecular and Cellular Biology. 19: 6980-90. PMID 10490635  0.88
1998 Fargo DC, Zhang M, Gillham NW, Boynton JE. Shine-Dalgarno-like sequences are not required for translation of chloroplast mRNAs in Chlamydomonas reinhardtii chloroplasts or in Escherichia coli. Molecular & General Genetics : Mgg. 257: 271-82. PMID 9520261 DOI: 10.1007/s004380050648  0.88
1989 Amador AG, Esquifino AI, Bartke A, Chandrashekar V, Fernández-Ruiz JJ, Steger RW, Hodges SL. Effects of diethylstilboestrol on testicular function and luteinizing hormone receptors. Revista EspañOla De FisiologíA. 45: 245-53. PMID 2515561 DOI: 10.1016/j.molcel.2014.07.011  0.88
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