Markus Dittrich, Ph.D. - Publications

2005 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
theoretical biophysics

18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Donovan RM, Tapia JJ, Sullivan DP, Faeder JR, Murphy RF, Dittrich M, Zuckerman DM. Unbiased Rare Event Sampling in Spatial Stochastic Systems Biology Models Using a Weighted Ensemble of Trajectories. Plos Computational Biology. 12: e1004611. PMID 26845334 DOI: 10.1371/Journal.Pcbi.1004611  1
2015 Ma J, Kelly L, Ingram J, Price TJ, Meriney SD, Dittrich M. New insights into short-term synaptic facilitation at the frog neuromuscular junction. Journal of Neurophysiology. 113: 71-87. PMID 25210157 DOI: 10.1152/jn.00198.2014  1
2015 Sullivan DP, Murphy RF, Tapia JJ, Dittrich M, Arepally R, Faeder JR. Design automation for biological models: A pipeline that incorporates spatial and molecular complexity Proceedings of the Acm Great Lakes Symposium On Vlsi, Glsvlsi. 20: 321-323. DOI: 10.1145/2742060.2743763  1
2013 Dittrich M, Pattillo JM, King JD, Cho S, Stiles JR, Meriney SD. An excess-calcium-binding-site model predicts neurotransmitter release at the neuromuscular junction. Biophysical Journal. 104: 2751-63. PMID 23790384 DOI: 10.1016/J.Bpj.2013.05.023  1
2013 Meriney SD, Dittrich M. Organization and function of transmitter release sites at the neuromuscular junction. The Journal of Physiology. 591: 3159-65. PMID 23613535 DOI: 10.1113/jphysiol.2012.248625  1
2013 Tarr TB, Dittrich M, Meriney SD. Are unreliable release mechanisms conserved from NMJ to CNS? Trends in Neurosciences. 36: 14-22. PMID 23102681 DOI: 10.1016/j.tins.2012.09.009  1
2011 Luo F, Dittrich M, Stiles JR, Meriney SD. Single-pixel optical fluctuation analysis of calcium channel function in active zones of motor nerve terminals. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 11268-81. PMID 21813687 DOI: 10.1523/JNEUROSCI.1394-11.2011  1
2011 Kleinekathöfer U, Isralewitz B, Dittrich M, Schulten K. Domain motion of individual F1-ATPase β-subunits during unbiased molecular dynamics simulations. The Journal of Physical Chemistry. A. 115: 7267-74. PMID 21452901 DOI: 10.1021/Jp2005088  1
2010 DeStefino NR, Pilato AA, Dittrich M, Cherry SV, Cho S, Stiles JR, Meriney SD. (R)-roscovitine prolongs the mean open time of unitary N-type calcium channel currents. Neuroscience. 167: 838-49. PMID 20188151 DOI: 10.1016/j.neuroscience.2010.02.041  1
2009 Czech J, Dittrich M, Stiles JR. Rapid creation, Monte Carlo simulation, and visualization of realistic 3D cell models. Methods in Molecular Biology (Clifton, N.J.). 500: 237-87. PMID 19399426 DOI: 10.1007/978-1-59745-525-1_9  1
2008 Kerr RA, Bartol TM, Kaminsky B, Dittrich M, Chang JC, Baden SB, Sejnowski TJ, Stiles JR. FAST MONTE CARLO SIMULATION METHODS FOR BIOLOGICAL REACTION-DIFFUSION SYSTEMS IN SOLUTION AND ON SURFACES. Siam Journal On Scientific Computing : a Publication of the Society For Industrial and Applied Mathematics. 30: 3126. PMID 20151023 DOI: 10.1137/070692017  1
2006 Dittrich M, Schulten K. PcrA helicase, a prototype ATP-driven molecular motor. Structure (London, England : 1993). 14: 1345-53. PMID 16962966 DOI: 10.1016/J.Str.2006.06.017  1
2006 Freddolino PL, Dittrich M, Schulten K. Dynamic switching mechanisms in LOV1 and LOV2 domains of plant phototropins. Biophysical Journal. 91: 3630-9. PMID 16935961 DOI: 10.1529/Biophysj.106.088609  1
2005 Dittrich M, Freddolino PL, Schulten K. When light falls in LOV: a quantum mechanical/molecular mechanical study of photoexcitation in Phot-LOV1 of Chlamydomonas reinhardtii. The Journal of Physical Chemistry. B. 109: 13006-13. PMID 16852614 DOI: 10.1021/Jp050943O  1
2005 Dittrich M, Schulten K. Zooming in on ATP hydrolysis in F1. Journal of Bioenergetics and Biomembranes. 37: 441-4. PMID 16691480 DOI: 10.1007/S10863-005-9487-7  1
2004 Dittrich M, Hayashi S, Schulten K. ATP hydrolysis in the betaTP and betaDP catalytic sites of F1-ATPase. Biophysical Journal. 87: 2954-67. PMID 15315950 DOI: 10.1529/Biophysj.104.046128  1
2003 Dittrich M, Hayashi S, Schulten K. On the mechanism of ATP hydrolysis in F1-ATPase. Biophysical Journal. 85: 2253-66. PMID 14507690 DOI: 10.1016/S0006-3495(03)74650-5  1
2002 Phillips R, Dittrich M, Schulten K. Quasicontinuum representations of atomic-scale mechanics: From proteins to dislocations Annual Review of Materials Science. 32: 219-233. DOI: 10.1146/Annurev.Matsci.32.122001.102202  1
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