Seth M. Rubin - Publications

Affiliations: 
Chemistry & Biochemistry University of California, Santa Cruz, Santa Cruz, CA, United States 
Area:
Molecular Mechanisms of Cell Cycle Regulation and Cancer
Website:
http://www.chemistry.ucsc.edu/faculty/singleton.php?&singleton=true&cruz_id=srubin

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Marceau AH, Brison CM, Nerli S, Arsenault HE, McShan AC, Chen E, Lee HW, Benanti JA, Sgourakis NG, Rubin SM. An order-to-disorder structural switch activates the FoxM1 transcription factor. Elife. 8. PMID 31134895 DOI: 10.7554/eLife.46131  0.48
2019 Topacio BR, Zatulovskiy E, Cristea S, Xie S, Tambo CS, Rubin SM, Sage J, Kõivomägi M, Skotheim JM. Cyclin D-Cdk4,6 Drives Cell-Cycle Progression via the Retinoblastoma Protein's C-Terminal Helix. Molecular Cell. PMID 30982746 DOI: 10.1016/j.molcel.2019.03.020  0.44
2017 McGrath DA, Fifield BA, Marceau AH, Tripathi S, Porter LA, Rubin SM. Structural basis of divergent cyclin-dependent kinase activation by Spy1/RINGO proteins. The Embo Journal. PMID 28666995 DOI: 10.15252/embj.201796905  0.32
2017 Liban TJ, Medina EM, Tripathi S, Sengupta S, Henry RW, Buchler NE, Rubin SM. Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family. Proceedings of the National Academy of Sciences of the United States of America. PMID 28439018 DOI: 10.1073/pnas.1619170114  0.48
2016 Liban TJ, Thwaites MJ, Dick FA, Rubin SM. Structural Conservation and E2F Binding Specificity within the Retinoblastoma Pocket Protein Family. Journal of Molecular Biology. PMID 27567532 DOI: 10.1016/j.jmb.2016.08.017  0.48
2016 Marceau AH, Felthousen JG, Goetsch PD, Iness AN, Lee HW, Tripathi SM, Strome S, Litovchick L, Rubin SM. Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters. Nature Communications. 7: 12301. PMID 27465258 DOI: 10.1038/ncomms12301  0.48
2016 Pye CR, Bray WM, Brown ER, Burke JR, Lokey RS, Rubin SM. A Strategy for Direct Chemical Activation of the Retinoblastoma Protein. Acs Chemical Biology. PMID 26845289 DOI: 10.1021/acschembio.6b00011  0.92
2015 Guiley KZ, Liban TJ, Felthousen JG, Ramanan P, Litovchick L, Rubin SM. Structural mechanisms of DREAM complex assembly and regulation. Genes & Development. 29: 961-74. PMID 25917549 DOI: 10.1101/gad.257568.114  0.92
2015 Guiley KZ, Liban TJ, Felthousen JG, Ramanan P, Litovchick L, Rubin SM. Structural mechanisms of DREAM complex assembly and regulation Genes and Development. 29: 961-974.  0.92
2014 Burke JR, Liban TJ, Restrepo T, Lee HW, Rubin SM. Multiple mechanisms for E2F binding inhibition by phosphorylation of the retinoblastoma protein C-terminal domain. Journal of Molecular Biology. 426: 245-55. PMID 24103329 DOI: 10.1016/j.jmb.2013.09.031  0.92
2013 Rubin SM, Sage J. Defining a new vision for the retinoblastoma gene: report from the 3rd International Rb Meeting. Cell Division. 8: 13. PMID 24257515 DOI: 10.1186/1747-1028-8-13  0.92
2013 McGrath DA, Balog ER, Kõivomägi M, Lucena R, Mai MV, Hirschi A, Kellogg DR, Loog M, Rubin SM. Cks confers specificity to phosphorylation-dependent CDK signaling pathways. Nature Structural & Molecular Biology. 20: 1407-14. PMID 24186063 DOI: 10.1038/nsmb.2707  0.92
2013 Kõivomägi M, Ord M, Iofik A, Valk E, Venta R, Faustova I, Kivi R, Balog ER, Rubin SM, Loog M. Multisite phosphorylation networks as signal processors for Cdk1. Nature Structural & Molecular Biology. 20: 1415-24. PMID 24186061 DOI: 10.1038/nsmb.2706  0.92
2013 Shi T, Bunker RD, Mattarocci S, Ribeyre C, Faty M, Gut H, Scrima A, Rass U, Rubin SM, Shore D, Thomä NH. Rif1 and Rif2 shape telomere function and architecture through multivalent Rap1 interactions. Cell. 153: 1340-53. PMID 23746845 DOI: 10.1016/j.cell.2013.05.007  0.92
2013 Schachter MM, Merrick KA, Larochelle S, Hirschi A, Zhang C, Shokat KM, Rubin SM, Fisher RP. A Cdk7-Cdk4 T-loop phosphorylation cascade promotes G1 progression. Molecular Cell. 50: 250-60. PMID 23622515 DOI: 10.1016/j.molcel.2013.04.003  0.32
2013 Dick FA, Rubin SM. Molecular mechanisms underlying RB protein function. Nature Reviews. Molecular Cell Biology. 14: 297-306. PMID 23594950 DOI: 10.1038/nrm3567  0.92
2013 Rubin SM. Deciphering the retinoblastoma protein phosphorylation code. Trends in Biochemical Sciences. 38: 12-9. PMID 23218751 DOI: 10.1016/j.tibs.2012.10.007  0.92
2012 Hegnauer AM, Hustedt N, Shimada K, Pike BL, Vogel M, Amsler P, Rubin SM, van Leeuwen F, Guénolé A, van Attikum H, Thomä NH, Gasser SM. An N-terminal acidic region of Sgs1 interacts with Rpa70 and recruits Rad53 kinase to stalled forks. The Embo Journal. 31: 3768-83. PMID 22820947 DOI: 10.1038/emboj.2012.195  0.92
2012 Burke JR, Hura GL, Rubin SM. Structures of inactive retinoblastoma protein reveal multiple mechanisms for cell cycle control. Genes & Development. 26: 1156-66. PMID 22569856 DOI: 10.1101/gad.189837.112  0.92
2011 Kõivomägi M, Valk E, Venta R, Iofik A, Lepiku M, Balog ER, Rubin SM, Morgan DO, Loog M. Cascades of multisite phosphorylation control Sic1 destruction at the onset of S phase. Nature. 480: 128-31. PMID 21993622 DOI: 10.1038/nature10560  0.92
2011 Balog ER, Saetern OC, Finch W, Hoeft CO, Thai V, Harvey SL, Kellogg DR, Rubin SM. The structure of a monomeric mutant Cks protein reveals multiple functions for a conserved hinge-region proline. Journal of Molecular Biology. 411: 520-8. PMID 21704044 DOI: 10.1016/j.jmb.2011.05.045  0.92
2011 Balog ER, Burke JR, Hura GL, Rubin SM. Crystal structure of the unliganded retinoblastoma protein pocket domain. Proteins. 79: 2010-4. PMID 21491492 DOI: 10.1002/prot.23007  0.92
2010 Rubin SM. E2F1 regulation by the APC/C. Cell Cycle (Georgetown, Tex.). 9: 4044. PMID 21058424 DOI: 10.4161/cc.9.20.13415  0.92
2010 Saddic LA, West LE, Aslanian A, Yates JR, Rubin SM, Gozani O, Sage J. Methylation of the retinoblastoma tumor suppressor by SMYD2. The Journal of Biological Chemistry. 285: 37733-40. PMID 20870719 DOI: 10.1074/jbc.M110.137612  0.92
2010 Hirschi A, Cecchini M, Steinhardt RC, Schamber MR, Dick FA, Rubin SM. An overlapping kinase and phosphatase docking site regulates activity of the retinoblastoma protein. Nature Structural & Molecular Biology. 17: 1051-7. PMID 20694007 DOI: 10.1038/nsmb.1868  0.92
2010 Burke JR, Deshong AJ, Pelton JG, Rubin SM. Phosphorylation-induced conformational changes in the retinoblastoma protein inhibit E2F transactivation domain binding. The Journal of Biological Chemistry. 285: 16286-93. PMID 20223825 DOI: 10.1074/jbc.M110.108167  0.92
2005 Rubin SM, Gall AL, Zheng N, Pavletich NP. Structure of the Rb C-terminal domain bound to E2F1-DP1: a mechanism for phosphorylation-induced E2F release. Cell. 123: 1093-106. PMID 16360038 DOI: 10.1016/j.cell.2005.09.044  0.92
2005 Lowery TJ, Doucleff M, Ruiz EJ, Rubin SM, Pines A, Wemmer DE. Distinguishing multiple chemotaxis Y protein conformations with laser-polarized 129Xe NMR. Protein Science : a Publication of the Protein Society. 14: 848-55. PMID 15741343 DOI: 10.1110/ps.041231005  0.92
2004 Spence MM, Ruiz EJ, Rubin SM, Lowery TJ, Winssinger N, Schultz PG, Wemmer DE, Pines A. Development of a functionalized xenon biosensor. Journal of the American Chemical Society. 126: 15287-94. PMID 15548026 DOI: 10.1021/ja0483037  0.92
2004 Lowery TJ, Rubin SM, Ruiz EJ, Pines A, Wemmer DE. Design of a conformation-sensitive xenon-binding cavity in the ribose-binding protein. Angewandte Chemie (International Ed. in English). 43: 6320-2. PMID 15476190 DOI: 10.1002/anie.200460629  0.92
2003 Rubin SM, Pelton JG, Yokota H, Kim R, Wemmer DE. Solution structure of a putative ribosome binding protein from Mycoplasma pneumoniae and comparison to a distant homolog. Journal of Structural and Functional Genomics. 4: 235-43. PMID 15185964 DOI: 10.1023/B:JSFG.0000016127.57320.82  0.92
2003 Lowery TJ, Rubin SM, Ruiz EJ, Spence MM, Winssinger N, Schultz PG, Pines A, Wemmer DE. Applications of laser-polarized 129Xe to biomolecular assays. Magnetic Resonance Imaging. 21: 1235-9. PMID 14725931 DOI: 10.1016/j.mri.2003.08.025  0.92
2002 Rubin SM, Lee SY, Ruiz EJ, Pines A, Wemmer DE. Detection and characterization of xenon-binding sites in proteins by 129Xe NMR spectroscopy. Journal of Molecular Biology. 322: 425-40. PMID 12217701 DOI: 10.1016/S0022-2836(02)00739-8  0.92
2001 Spence MM, Rubin SM, Dimitrov IE, Ruiz EJ, Wemmer DE, Pines A, Yao SQ, Tian F, Schultz PG. Functionalized xenon as a biosensor. Proceedings of the National Academy of Sciences of the United States of America. 98: 10654-7. PMID 11535830 DOI: 10.1073/pnas.191368398  0.92
2001 Rubin SM, Spence MM, Pines A, Wemmer DE. Characterization of the effects of nonspecific xenon-protein interactions on (129)Xe chemical shifts in aqueous solution: further development of xenon as a biomolecular probe. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 152: 79-86. PMID 11531366 DOI: 10.1006/jmre.2001.2389  0.92
2001 Rubin SM, Spence MM, Dimitrov IE, Ruiz EJ, Pines A, Wemmer DE. Detection of a conformational change in maltose binding protein by (129)Xe NMR spectroscopy. Journal of the American Chemical Society. 123: 8616-7. PMID 11525678 DOI: 10.1021/ja0110325  0.92
2000 Rubin SM, Spence MM, Goodson BM, Wemmer DE, Pines A. Evidence of nonspecific surface interactions between laser-polarized xenon and myoglobin in solution. Proceedings of the National Academy of Sciences of the United States of America. 97: 9472-5. PMID 10931956 DOI: 10.1073/pnas.170278897  0.92
2000 Sevy ET, Rubin SM, Lin Z, Flynn GW. Translational and rotational excitation of the CO2(00°0) vibrationless state in the collisional quenching of highly vibrationally exited 2-methylpyrazine: kinetics and dynamics of large energy transfers Journal of Chemical Physics. 113: 4912-4932. DOI: 10.1063/1.1289247  0.92
2000 Sevy ET, Muyskens MA, Rubin SM, Flynn GW, Muckerman JT. Competition between photochemistry and energy transfer in ultraviolet-excited diazabenzenes. I. Photofragmentation studies of pyrazine at 248 nm and 266 nm Journal of Chemical Physics. 112: 5829-5843.  0.92
1998 Giancarlo LC, Fang H, Rubin SM, Bront AA, Flynn GW. Influence of the substrate on order and image contrast for physisorbed, self-assembled molecular monolayers: STM studies of functionalized hydrocarbons on graphite and MoS2 Journal of Physical Chemistry B. 102: 10255-10263.  0.92
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