Sutapa Chakrabarti, Ph.D. - Publications

Affiliations: 
2007 University of California, San Diego, La Jolla, CA 
Area:
transcription, signaling, pre-mRNA splicing, mRNA transport, protein-protein, protein-DNA and protein-RNA interactions

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Gowravaram M, Bonneau F, Kanaan J, Maciej VD, Fiorini F, Raj S, Croquette V, Le Hir H, Chakrabarti S. A conserved structural element in the RNA helicase UPF1 regulates its catalytic activity in an isoform-specific manner. Nucleic Acids Research. PMID 29378013 DOI: 10.1093/Nar/Gky040  0.36
2016 Li B, Iordanous Y, Wang Y, Chakrabarti S, Allen LH. Adenoid cystic carcinoma presenting as an orbital apex mass with intracranial extension. Canadian Journal of Ophthalmology. Journal Canadien D'Ophtalmologie. 51: e65-e67. PMID 27085282 DOI: 10.1016/j.jcjo.2015.12.012  0.32
2015 Iordanous Y, Belrose JC, Cadieux DC, Chakrabarti S, Farmer JP, Allen LH. P63 Positive Mucoepidermoid Tumor of the Lacrimal Sac with Associated Papilloma. Orbit (Amsterdam, Netherlands). 1-3. PMID 26121166 DOI: 10.3109/01676830.2015.1049370  0.32
2015 Ozgur S, Buchwald G, Falk S, Chakrabarti S, Prabu JR, Conti E. The conformational plasticity of eukaryotic RNA-dependent ATPases. The Febs Journal. 282: 850-63. PMID 25645110 DOI: 10.1111/Febs.13198  0.36
2015 Ozgur S, Buchwald G, Falk S, Chakrabarti S, Prabu JR, Conti E. The conformational plasticity of eukaryotic RNA-dependent ATPases Febs Journal. DOI: 10.1111/febs.13198  0.48
2014 Chakrabarti S, Bonneau F, Schüssler S, Eppinger E, Conti E. Phospho-dependent and phospho-independent interactions of the helicase UPF1 with the NMD factors SMG5-SMG7 and SMG6 Nucleic Acids Research. 42: 9447-9460. PMID 25013172 DOI: 10.1093/Nar/Gku578  0.48
2011 Cho S, Hoang A, Chakrabarti S, Huynh N, Huang DB, Ghosh G. The SRSF1 linker induces semi-conservative ESE binding by cooperating with the RRMs. Nucleic Acids Research. 39: 9413-21. PMID 21852328 DOI: 10.1093/Nar/Gkr663  0.48
2011 Chawla A, Chakrabarti S, Ghosh G, Niwa M. Attenuation of yeast UPR is essential for survival and is mediated by IRE1 kinase. The Journal of Cell Biology. 193: 41-50. PMID 21444691 DOI: 10.1083/Jcb.201008071  0.48
2011 Chakrabarti S, Jayachandran U, Bonneau F, Fiorini F, Basquin C, Domcke S, Le Hir H, Conti E. Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2. Molecular Cell. 41: 693-703. PMID 21419344 DOI: 10.1016/J.Molcel.2011.02.010  0.48
2008 Ngo JC, Giang K, Chakrabarti S, Ma CT, Huynh N, Hagopian JC, Dorrestein PC, Fu XD, Adams JA, Ghosh G. A sliding docking interaction is essential for sequential and processive phosphorylation of an SR protein by SRPK1. Molecular Cell. 29: 563-76. PMID 18342604 DOI: 10.1016/J.Molcel.2007.12.017  0.48
2007 Shaw SD, Chakrabarti S, Ghosh G, Krainer AR. Deletion of the N-terminus of SF2/ASF permits RS-domain-independent pre-mRNA splicing. Plos One. 2: e854. PMID 17786225 DOI: 10.1371/Journal.Pone.0000854  0.48
2005 Ngo JC, Chakrabarti S, Ding JH, Velazquez-Dones A, Nolen B, Aubol BE, Adams JA, Fu XD, Ghosh G. Interplay between SRPK and Clk/Sty kinases in phosphorylation of the splicing factor ASF/SF2 is regulated by a docking motif in ASF/SF2. Molecular Cell. 20: 77-89. PMID 16209947 DOI: 10.1016/J.Molcel.2005.08.025  0.48
2003 Aubol BE, Chakrabarti S, Ngo J, Shaffer J, Nolen B, Fu XD, Ghosh G, Adams JA. Processive phosphorylation of alternative splicing factor/splicing factor 2. Proceedings of the National Academy of Sciences of the United States of America. 100: 12601-6. PMID 14555757 DOI: 10.1073/Pnas.1635129100  0.48
2003 Nolen B, Ngo J, Chakrabarti S, Vu D, Adams JA, Ghosh G. Nucleotide-induced conformational changes in the Saccharomyces cerevisiae SR protein kinase, Sky1p, revealed by X-ray crystallography. Biochemistry. 42: 9575-85. PMID 12911299 DOI: 10.1021/Bi0344331  0.48
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