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Yun Bai, Ph.D. - Publications

2010 Columbia University, New York, NY 
 2016- ShanghaiTech University 
Structural Molecular Biology

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Luo X, Li W, Bai Y, Du L, Wu R, Li Z. Relation between carotid vulnerable plaques and peripheral leukocyte: a case-control study of comparison utilizing multi-parametric contrast-enhanced ultrasound. Bmc Medical Imaging. 19: 74. PMID 31443643 DOI: 10.1186/s12880-019-0374-9  0.36
2019 Wang P, Wei S, Tong L, He X, Bai Y, Jia K, Liu X. An Immunosensor Based on Au-Ag Bimetallic NPs Patterned on a Thermal Resistant Flexible Polymer Substrate for In-Vitro Protein Detection. Polymers. 11. PMID 31362450 DOI: 10.3390/polym11081257  1
2019 Wang Y, Guan X, Chen X, Cai Y, Ma Y, Ma J, Zhang Q, Dai L, Fan X, Bai Y. Choline Supplementation Ameliorates Behavioural Deficits and Alzheimer's Disease-Like Pathology in Transgenic APP/PS1 Mice. Molecular Nutrition & Food Research. e1801407. PMID 31298459 DOI: 10.1002/mnfr.201801407  0.32
2019 Ma Q, Liang M, Wu Y, Ding N, Duan L, Yu T, Bai Y, Kang F, Dong S, Xu J, Dou C. Mature osteoclast-derived apoptotic bodies promote osteogenic differentiation via RANKL-mediated reverse signaling. The Journal of Biological Chemistry. PMID 31167789 DOI: 10.1074/jbc.RA119.007625  0.4
2019 Li H, Pei H, Xie X, Wang S, Jia Y, Zhang B, Fan Z, Liu Y, Bai Y, Han Y, He L, Nan X, Yue W, Pei X. Liver Sinusoidal Endothelial Cells Promote the Expansion of Human Cord Blood Hematopoietic Stem and Progenitor Cells. International Journal of Molecular Sciences. 20. PMID 31018542 DOI: 10.3390/ijms20081985  0.36
2019 Zhang S, Liang Y, Wu Y, Chen X, Wang K, Li J, Guan X, Xiong G, Yang K, Bai Y. Upregulation of a novel lncRNA LINC01980 promotes tumor growth of esophageal squamous cell carcinoma. Biochemical and Biophysical Research Communications. PMID 30935686 DOI: 10.1016/j.bbrc.2019.03.012  0.4
2018 Zhang H, Leng C, Ding Y, Zhai H, Li Z, Xiang L, Zhang W, Liu C, Li M, Chen J, Bai Y, Kan Y, Yao L, Peng J, Wang Q, et al. Characterization of newly emerged NADC30-like strains of porcine reproductive and respiratory syndrome virus in China. Archives of Virology. PMID 30353281 DOI: 10.1007/s00705-018-4080-7  0.36
2018 Wang Z, Zhao K, Pan Y, Wang J, Song X, Ge W, Yuan M, Lei T, Wang L, Zhang L, Li Y, Liu T, Chen W, Meng W, Sun C, ... ... Bai Y, et al. Genomic, expressional, protein-protein interactional analysis of Trihelix transcription factor genes in Setaria italia and inference of their evolutionary trajectory. Bmc Genomics. 19: 665. PMID 30208846 DOI: 10.1186/s12864-018-5051-9  0.36
2018 Zhang H, Leng C, Tian Z, Liu C, Chen J, Bai Y, Li Z, Xiang L, Zhai H, Wang Q, Peng J, An T, Kan Y, Yao L, Yang X, et al. Complete genomic characteristics and pathogenic analysis of the newly emerged classical swine fever virus in China. Bmc Veterinary Research. 14: 204. PMID 29940930 DOI: 10.1186/s12917-018-1504-2  0.36
2018 Li Z, Bai Y, Li W, Gao F, Kuang Y, Du L, Luo X. Carotid vulnerable plaques are associated with circulating leukocytes in acute ischemic stroke patients: an clinical study based on contrast-enhanced ultrasound. Scientific Reports. 8: 8849. PMID 29892086 DOI: 10.1038/s41598-018-27260-0  0.36
2018 Wu Y, Chen X, Liang Y, Li J, Zhang K, Dai L, Guan X, Wang K, Bai Y. Overexpression of long non-coding RNA SOX2OT promotes esophageal squamous cell carcinoma growth. Cancer Cell International. 18: 76. PMID 29849506 DOI: 10.1186/s12935-018-0570-7  0.4
2018 Ding N, Liu C, Yao L, Bai Y, Cheng P, Li Z, Luo K, Mei T, Li J, Xing J, Gao X, Ma Q, Xu J, Luo F, Dou C. Alendronate induces osteoclast precursor apoptosis via peroxisomal dysfunction mediated ER stress. Journal of Cellular Physiology. PMID 29600563 DOI: 10.1002/jcp.26587  0.36
2018 Liang Y, Chen X, Wu Y, Li J, Zhang S, Wang K, Guan X, Yang K, Bai Y. LncRNA CASC9 promotes esophageal squamous cell carcinoma metastasis through upregulating LAMC2 expression by interacting with the CREB-binding protein. Cell Death and Differentiation. PMID 29511340 DOI: 10.1038/s41418-018-0084-9  0.4
2017 Wang K, Li J, Xiong G, He G, Guan X, Yang K, Bai Y. Negative regulation of lncRNA GAS5 by miR-196a inhibits esophageal squamous cell carcinoma growth. Biochemical and Biophysical Research Communications. PMID 29170131 DOI: 10.1016/j.bbrc.2017.11.119  0.4
2017 Liang Y, Wu Y, Chen X, Zhang S, Wang K, Guan X, Yang K, Li J, Bai Y. A novel long noncoding RNA linc00460 upregulated by CBP/P300 promotes carcinogenesis in Esophageal Squamous Cell Carcinoma. Bioscience Reports. PMID 28939763 DOI: 10.1042/BSR20171019  0.4
2017 Wu Y, Hu L, Liang Y, Li J, Wang K, Chen X, Meng H, Guan X, Yang K, Bai Y. Up-regulation of lncRNA CASC9 promotes esophageal squamous cell carcinoma growth by negatively regulating PDCD4 expression through EZH2. Molecular Cancer. 16: 150. PMID 28854977 DOI: 10.1186/s12943-017-0715-7  0.4
2017 Li J, Liang Y, Lv H, Meng H, Xiong G, Guan X, Chen X, Bai Y, Wang K. miR-26a and miR-26b inhibit esophageal squamous cancer cell proliferation through suppression of c-MYC pathway. Gene. PMID 28476684 DOI: 10.1016/j.gene.2017.05.001  0.4
2017 Yu F, Sun Y, Yu J, Ding Z, Wang J, Zhang L, Zhang T, Bai Y, Wang Y. ORMDL3 is associated with airway remodeling in asthma via the ERK/MMP-9 pathway. Molecular Medicine Reports. PMID 28358425 DOI: 10.3892/mmr.2017.6413  0.36
2016 Schulze-Gahmen U, Echeverria I, Stjepanovic G, Bai Y, Lu H, Schneidman-Duhovny D, Doudna JA, Zhou Q, Sali A, Hurley JH. Insights into HIV-1 proviral transcription from the structure and dynamics of the Tat:AFF4:P-TEFb:TAR complex. Elife. 5. PMID 27731797 DOI: 10.7554/eLife.15910  1
2016 Carlson LA, Bai Y, Keane SC, Doudna JA, Hurley JH. Reconstitution of selective HIV-1 RNA packaging in vitro by membrane-bound Gag assemblies. Elife. 5. PMID 27343348 DOI: 10.7554/eLife.14663  1
2016 Tan D, Wu Y, Hu L, He P, Xiong G, Bai Y, Yang K. Long noncoding RNA H19 is up-regulated in esophageal squamous cell carcinoma and promotes cell proliferation and metastasis. Diseases of the Esophagus : Official Journal of the International Society For Diseases of the Esophagus / I.S.D.E. PMID 27247022 DOI: 10.1111/dote.12481  0.4
2016 Liu M, DU G, Zhang Y, Wu Y, Wang H, Li B, Bai Y, Feng Z, Xiong Q, Bai F, Browning GF, Shao G. Development of a blocking ELISA for detection of Mycoplasma hyopneumoniae infection based on a monoclonal antibody against protein P65. The Journal of Veterinary Medical Science / the Japanese Society of Veterinary Science. PMID 27075114 DOI: 10.1292/jvms.15-0438  0.4
2016 Kotarek J, Stuart C, De Paoli SH, Simak J, Lin TL, Gao Y, Ovanesov M, Liang Y, Scott D, Brown J, Bai Y, Metcalfe DD, Marszal E, Ragheb JA. Subvisible Particle Content, Formulation, and Dose of an Erythropoietin Peptide Mimetic Product Are Associated With Severe Adverse Postmarketing Events. Journal of Pharmaceutical Sciences. PMID 26886324 DOI: 10.1016/S0022-3549(15)00180-X  0.32
2015 Wu Y, Liu X, Hu L, Tao H, Guan X, Zhang K, Bai Y, Yang K. Copy number loss of variation_91720 in PIK3CA predicts risk of esophageal squamous cell carcinoma. International Journal of Clinical and Experimental Pathology. 8: 14479-85. PMID 26823766  0.4
2015 Hu L, Wu Y, Guan X, Liang Y, Yao X, Tan D, Bai Y, Xiong G, Yang K. Germline copy number loss of UGT2B28 and gain of PLEC contribute to increased human esophageal squamous cell carcinoma risk in Southwest China. American Journal of Cancer Research. 5: 3056-71. PMID 26693059  0.4
2015 Feng X, Ullah N, Wang X, Sun X, Li C, Bai Y, Chen L, Li Z. Characterization of Bacterial Cellulose by Gluconacetobacter hansenii CGMCC 3917. Journal of Food Science. PMID 26352877 DOI: 10.1111/1750-3841.13010  0.36
2015 Zhang L, Li Z, Zhang B, He H, Bai Y. PPIA is a novel adipogenic factor implicated in obesity. Obesity (Silver Spring, Md.). PMID 26347493 DOI: 10.1002/oby.21208  0.36
2015 Li C, Bai Y, Yan L, Zhang L, Zhang H, Li M, Zhao M, Gao Y, Zhao X. SPAG9 May Be a Potential Prognostic Marker of Endometrial Hyperplasia and Grade 1 Endometrioid Adenocarcinoma Treated with Progestin. Gynecologic and Obstetric Investigation. PMID 26334303 DOI: 10.1159/000437015  0.36
2015 Bai Y, Zhang L, Jin W, Wei M, Zhou P, Zheng G, Niu L, Nie L, Zhang Y, Wang H, Yu L. In situ high-valued utilization and transformation of sugars from Dioscorea zingiberensis C.H. Wright for clean production of diosgenin. Bioresource Technology. 196: 642-7. PMID 26299979 DOI: 10.1016/j.biortech.2015.08.010  0.36
2015 Meng H, Wang K, Chen X, Guan X, Hu L, Xiong G, Li J, Bai Y. MicroRNA-330-3p functions as an oncogene in human esophageal cancer by targeting programmed cell death 4. American Journal of Cancer Research. 5: 1062-75. PMID 26045986  0.4
2015 Zhang YP, Wang HT, Zhang L, Yang L, Guo XD, Bai Y, Sun H. [Measurements of IR absorption across section and spectrum simulation of lewisite]. Guang Pu Xue Yu Guang Pu Fen Xi = Guang Pu. 35: 466-9. PMID 25970914  0.36
2015 Li B, Li H, Bai Y, Kirschner-Schwabe R, Yang JJ, Chen Y, Lu G, Tzoneva G, Ma X, Wu T, Li W, Lu H, Ding L, Liang H, Huang X, et al. Negative feedback-defective PRPS1 mutants drive thiopurine resistance in relapsed childhood ALL. Nature Medicine. 21: 563-71. PMID 25962120 DOI: 10.1038/nm.3840  1
2015 Meng H, Guan X, Guo H, Xiong G, Yang K, Wang K, Bai Y. Association between SNPs in Serpin gene family and risk of esophageal squamous cell carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 25775950 DOI: 10.1007/s13277-015-3308-3  0.4
2015 Hu L, Wu Y, Tan D, Meng H, Wang K, Bai Y, Yang K. Up-regulation of long noncoding RNA MALAT1 contributes to proliferation and metastasis in esophageal squamous cell carcinoma. Journal of Experimental & Clinical Cancer Research : Cr. 34: 7. PMID 25613496 DOI: 10.1186/s13046-015-0123-z  0.4
2015 Zhang K, Dai L, Zhang B, Xu X, Shi J, Fu L, Chen X, Li J, Bai Y. miR-203 is a direct transcriptional target of E2F1 and causes G1 arrest in esophageal cancer cells. Journal of Cellular Physiology. 230: 903-10. PMID 25216463 DOI: 10.1002/jcp.24821  0.36
2014 Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S. Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus. Bmc Genomics. 15: 736. PMID 25168356 DOI: 10.1186/1471-2164-15-736  0.36
2014 Bai Y, Tambe A, Zhou K, Doudna JA. RNA-guided assembly of Rev-RRE nuclear export complexes. Elife. 3: e03656. PMID 25163983  1
2014 Li J, Shan F, Xiong G, Chen X, Guan X, Wang JM, Wang WL, Xu X, Bai Y. EGF-induced C/EBPβ participates in EMT by decreasing the expression of miR-203 in esophageal squamous cell carcinoma cells. Journal of Cell Science. 127: 3735-44. PMID 24994936 DOI: 10.1242/jcs.148759  0.4
2014 Dai L, Liu D, Song M, Xu X, Xiong G, Yang K, Zhang K, Meng H, Guo H, Bai Y. Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. Plos One. 9: e96192. PMID 24789103 DOI: 10.1371/journal.pone.0096192  0.4
2014 Dai L, Fu L, Liu D, Zhang K, Wu Y, Meng H, Zhang B, Guan X, Guo H, Bai Y. Novel and recurrent mutations of STK11 gene in six Chinese cases with Peutz-Jeghers syndrome. Digestive Diseases and Sciences. 59: 1856-61. PMID 24604241 DOI: 10.1007/s10620-014-3077-7  0.4
2014 Li J, Shan F, Xiong G, Wang JM, Wang WL, Xu X, Bai Y. Transcriptional regulation of miR-146b by C/EBPβ LAP2 in esophageal cancer cells. Biochemical and Biophysical Research Communications. 446: 267-71. PMID 24589738 DOI: 10.1016/j.bbrc.2014.02.096  0.4
2014 Wang K, Liu B, Li J, Xiong G, Guan X, Yang K, Bai Y. Association between SNPs in P53 binding regions and risk of esophageal squamous cell carcinoma. The International Journal of Biological Markers. 29: e160-8. PMID 24474449 DOI: 10.5301/jbm.5000061  0.4
2014 Dai L, Wu J, Guo H, Huang Y, Zhang K, Liu D, Fu L, Wu Y, Guan X, Bai Y, Liao Q. Mutation p.Leu128Pro in the 1A domain of K16 causes pachyonychia congenita with focal palmoplantar keratoderma in a Chinese family. European Journal of Pediatrics. 173: 737-41. PMID 24357266 DOI: 10.1007/s00431-013-2236-8  0.4
2013 Bai Y, Zhou K, Doudna JA. Hepatitis C virus 3'UTR regulates viral translation through direct interactions with the host translation machinery. Nucleic Acids Research. 41: 7861-74. PMID 23783572 DOI: 10.1093/nar/gkt543  1
2011 Sun C, Todorovic A, Querol-Audí J, Bai Y, Villa N, Snyder M, Ashchyan J, Lewis CS, Hartland A, Gradia S, Fraser CS, Doudna JA, Nogales E, Cate JH. Functional reconstitution of human eukaryotic translation initiation factor 3 (eIF3). Proceedings of the National Academy of Sciences of the United States of America. 108: 20473-8. PMID 22135459 DOI: 10.1073/pnas.1116821108  1
2011 Berry KE, Waghray S, Mortimer SA, Bai Y, Doudna JA. Crystal structure of the HCV IRES central domain reveals strategy for start-codon positioning. Structure (London, England : 1993). 19: 1456-66. PMID 22000514 DOI: 10.1016/j.str.2011.08.002  1
2011 Bai Y, Srivastava SK, Chang JH, Manley JL, Tong L. Structural basis for dimerization and activity of human PAPD1, a noncanonical poly(A) polymerase. Molecular Cell. 41: 311-20. PMID 21292163 DOI: 10.1016/j.molcel.2011.01.013  1
2008 Mandel CR, Bai Y, Tong L. Protein factors in pre-mRNA 3'-end processing. Cellular and Molecular Life Sciences : Cmls. 65: 1099-122. PMID 18158581 DOI: 10.1007/s00018-007-7474-3  1
2007 Bai Y, Auperin TC, Chou CY, Chang GG, Manley JL, Tong L. Crystal structure of murine CstF-77: dimeric association and implications for polyadenylation of mRNA precursors. Molecular Cell. 25: 863-75. PMID 17386263 DOI: 10.1016/j.molcel.2007.01.034  1
2007 Bai Y, Auperin TC, Tong L. The use of in situ proteolysis in the crystallization of murine CstF-77. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63: 135-8. PMID 17277459 DOI: 10.1107/S1744309107002904  1
2005 Rudolph MJ, Amodeo GA, Bai Y, Tong L. Crystal structure of the protein kinase domain of yeast AMP-activated protein kinase Snf1. Biochemical and Biophysical Research Communications. 337: 1224-8. PMID 16236260 DOI: 10.1016/j.bbrc.2005.09.181  1
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