Laura R. Jarboe, Ph.D. - Publications

2006 University of California, Los Angeles, Los Angeles, CA 
Chemical and Biomolecular Engineering

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Chen Y, Boggess EE, Ocasio ER, Warner A, Kerns L, Drapal V, Gossling C, Ross W, Gourse RL, Shao Z, Dickerson J, Mansell TJ, Jarboe LR. Reverse engineering of fatty acid-tolerant Escherichia coli identifies design strategies for robust microbial cell factories. Metabolic Engineering. PMID 32474056 DOI: 10.1016/J.Ymben.2020.05.001  0.334
2020 Jin T, Käldström M, Benavides A, Rechulski MDK, Jarboe LR. Utilization of mechanocatalytic oligosaccharides by ethanologenic Escherichia coli as a model microbial cell factory. Amb Express. 10: 28. PMID 32016659 DOI: 10.1186/S13568-020-0965-4  0.32
2019 Davis K, Rover MR, Salvachúa D, Smith RG, Beckham GT, Wen Z, Brown RC, Jarboe LR. Promoting microbial utilization of phenolic substrates from bio-oil. Journal of Industrial Microbiology & Biotechnology. PMID 31270700 DOI: 10.1007/S10295-019-02208-Z  0.306
2019 Chi Z, Zhao X, Daugaard T, Dalluge D, Rover M, Johnston P, Salazar AM, Santoscoy MC, Smith R, Brown RC, Wen Z, Zabotina OA, Jarboe LR. Comparison of product distribution, content and fermentability of biomass in a hybrid thermochemical/biological processing platform Biomass and Bioenergy. 120: 107-116. DOI: 10.1016/J.Biombioe.2018.11.006  0.348
2018 Chen Y, Reinhardt M, Neris N, Kerns L, Mansell TJ, Jarboe LR. Lessons in Membrane Engineering for Octanoic Acid Production from Environmental Isolates. Applied and Environmental Microbiology. PMID 30030228 DOI: 10.1128/Aem.01285-18  0.371
2018 Tan Z, Yoon JM, Chowdhury A, Burdick K, Jarboe LR, Maranas CD, Shanks JV. Engineering ofinherent fatty acid biosynthesis capacity to increase octanoic acid production. Biotechnology For Biofuels. 11: 87. PMID 29619083 DOI: 10.1186/S13068-018-1078-Z  0.37
2017 Liang X, Liao C, Soupir ML, Jarboe LR, Thompson ML, Dixon PM. Escherichia coli attachment to model particulates: The effects of bacterial cell characteristics and particulate properties. Plos One. 12: e0184664. PMID 28910343 DOI: 10.1371/Journal.Pone.0184664  0.313
2017 Tan Z, Khakbaz P, Chen Y, Lombardo J, Yoon JM, Shanks JV, Klauda JB, Jarboe LR. Engineering Escherichia coli Membrane Phospholipid Head Distribution Improves Tolerance and Production of Biorenewables. Metabolic Engineering. PMID 28867349 DOI: 10.1016/J.Ymben.2017.08.006  0.35
2017 Jin T, Rover MR, Petersen EM, Chi Z, Smith RG, Brown RC, Wen Z, Jarboe LR. Damage to the microbial cell membrane during pyrolytic sugar utilization and strategies for increasing resistance. Journal of Industrial Microbiology & Biotechnology. PMID 28551747 DOI: 10.1007/S10295-017-1958-4  0.364
2017 Liao C, Liang X, Yang F, Soupir ML, Howe AC, Thompson ML, Jarboe LR. Allelic Variation in Outer Membrane Protein A and Its Influence on Attachment of Escherichia coli to Corn Stover. Frontiers in Microbiology. 8: 708. PMID 28515712 DOI: 10.3389/Fmicb.2017.00708  0.314
2017 Tan Z, Black W, Yoon JM, Shanks JV, Jarboe LR. Improving Escherichia coli membrane integrity and fatty acid production by expression tuning of FadL and OmpF. Microbial Cell Factories. 16: 38. PMID 28245829 DOI: 10.1186/S12934-017-0650-8  0.336
2016 Liang X, Liao C, Thompson ML, Soupir ML, Jarboe LR, Dixon PM. E. coli Surface Properties Differ between Stream Water and Sediment Environments. Frontiers in Microbiology. 7: 1732. PMID 27847507 DOI: 10.3389/Fmicb.2016.01732  0.322
2016 Bacik JP, Jarboe LR. Bioconversion of anhydrosugars: Emerging concepts and strategies. Iubmb Life. PMID 27416973 DOI: 10.1002/Iub.1533  0.313
2016 Zhao X, Jarboe L, Wen Z. Utilization of pyrolytic substrate by microalga Chlamydomonas reinhardtii: cell membrane property change as a response of the substrate toxicity. Applied Microbiology and Biotechnology. PMID 26995605 DOI: 10.1007/S00253-016-7439-2  0.318
2016 Tan Z, Yoon JM, Nielsen DR, Shanks JV, Jarboe LR. Membrane Engineering via Trans Unsaturated Fatty Acids Production Improves Escherichia coli Robustness and Production of Biorenewables. Metabolic Engineering. PMID 26875445 DOI: 10.1016/J.Ymben.2016.02.004  0.383
2016 Lian J, McKenna R, Rover MR, Nielsen DR, Wen Z, Jarboe LR. Production of biorenewable styrene: utilization of biomass-derived sugars and insights into toxicity. Journal of Industrial Microbiology & Biotechnology. PMID 26803503 DOI: 10.1007/S10295-016-1734-X  0.335
2016 Davis K, Rover M, Brown R, Bai X, Wen Z, Jarboe L. Recovery and Utilization of Lignin Monomers as Part of the Biorefinery Approach Energies. 9: 808. DOI: 10.3390/En9100808  0.309
2015 Shen Y, Jarboe L, Brown R, Wen Z. A thermochemical-biochemical hybrid processing of lignocellulosic biomass for producing fuels and chemicals. Biotechnology Advances. PMID 26492814 DOI: 10.1016/J.Biotechadv.2015.10.006  0.316
2015 Trček J, Mira NP, Jarboe LR. Adaptation and tolerance of bacteria against acetic acid. Applied Microbiology and Biotechnology. 99: 6215-29. PMID 26142387 DOI: 10.1007/S00253-015-6762-3  0.381
2015 Royce LA, Yoon JM, Chen Y, Rickenbach E, Shanks JV, Jarboe LR. Evolution for exogenous octanoic acid tolerance improves carboxylic acid production and membrane integrity. Metabolic Engineering. 29: 180-8. PMID 25839166 DOI: 10.1016/J.Ymben.2015.03.014  0.363
2015 Fu Y, Yoon JM, Jarboe L, Shanks JV. Metabolic flux analysis of Escherichia coli MG1655 under octanoic acid (C8) stress. Applied Microbiology and Biotechnology. 99: 4397-408. PMID 25620365 DOI: 10.1007/S00253-015-6387-6  0.368
2014 Claypool JT, Raman DR, Jarboe LR, Nielsen DR. Technoeconomic evaluation of bio-based styrene production by engineered Escherichia coli. Journal of Industrial Microbiology & Biotechnology. 41: 1211-6. PMID 24939174 DOI: 10.1007/S10295-014-1469-5  0.331
2014 Rover MR, Johnston PA, Jin T, Smith RG, Brown RC, Jarboe L. Production of clean pyrolytic sugars for fermentation. Chemsuschem. 7: 1662-8. PMID 24706373 DOI: 10.1002/Cssc.201301259  0.313
2014 Royce LA, Boggess E, Fu Y, Liu P, Shanks JV, Dickerson J, Jarboe LR. Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damage. Plos One. 9: e89580. PMID 24586888 DOI: 10.1371/Journal.Pone.0089580  0.385
2014 Bacik J, Broom-Peltz B, Jarboe L, Mark B, Michalczyk R, Fisher Z, Unkefer C. Structure and mechanism of LGK: insights into the bioconversion of levoglucosan Acta Crystallographica Section a Foundations and Advances. 70: C1205-C1205. DOI: 10.1107/S2053273314087944  0.325
2013 Jarboe LR, Royce LA, Liu P. Understanding biocatalyst inhibition by carboxylic acids. Frontiers in Microbiology. 4: 272. PMID 24027566 DOI: 10.3389/Fmicb.2013.00272  0.412
2013 Royce LA, Liu P, Stebbins MJ, Hanson BC, Jarboe LR. The damaging effects of short chain fatty acids on Escherichia coli membranes. Applied Microbiology and Biotechnology. 97: 8317-27. PMID 23912117 DOI: 10.1007/S00253-013-5113-5  0.364
2013 Liang Y, Zhao X, Chi Z, Rover M, Johnston P, Brown R, Jarboe L, Wen Z. Utilization of acetic acid-rich pyrolytic bio-oil by microalga Chlamydomonas reinhardtii: reducing bio-oil toxicity and enhancing algal toxicity tolerance. Bioresource Technology. 133: 500-6. PMID 23455221 DOI: 10.1016/J.Biortech.2013.01.134  0.32
2013 Liu P, Chernyshov A, Najdi T, Fu Y, Dickerson J, Sandmeyer S, Jarboe L. Membrane stress caused by octanoic acid in Saccharomyces cerevisiae Applied Microbiology and Biotechnology. 97: 3239-3251. PMID 23435986 DOI: 10.1007/S00253-013-4773-5  0.36
2013 Kautharapu KB, Rathmacher J, Jarboe LR. Growth condition optimization for docosahexaenoic acid (DHA) production by Moritella marina MP-1. Applied Microbiology and Biotechnology. 97: 2859-66. PMID 23111600 DOI: 10.1007/S00253-012-4529-7  0.344
2013 Zhao X, Chi Z, Rover M, Brown R, Jarboe L, Wen Z. Microalgae fermentation of acetic acid-rich pyrolytic bio-oil: Reducing bio-oil toxicity by alkali treatment Environmental Progress and Sustainable Energy. 32: 955-961. DOI: 10.1002/Ep.11813  0.303
2012 Liu P, Jarboe LR. Metabolic engineering of biocatalysts for carboxylic acids production. Computational and Structural Biotechnology Journal. 3: e201210011. PMID 24688671 DOI: 10.5936/Csbj.201210011  0.379
2012 Jarboe LR, Liu P, Kautharapu KB, Ingram LO. Optimization of enzyme parameters for fermentative production of biorenewable fuels and chemicals. Computational and Structural Biotechnology Journal. 3: e201210005. PMID 24688665 DOI: 10.5936/Csbj.201210005  0.324
2011 Layton DS, Ajjarapu A, Choi DW, Jarboe LR. Engineering ethanologenic Escherichia coli for levoglucosan utilization. Bioresource Technology. 102: 8318-22. PMID 21719279 DOI: 10.1016/J.Biortech.2011.06.011  0.352
2011 Fu Y, Jarboe LR, Dickerson JA. Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities. Bmc Bioinformatics. 12: 233. PMID 21668997 DOI: 10.1186/1471-2105-12-233  0.353
2011 Jarboe LR. YqhD: a broad-substrate range aldehyde reductase with various applications in production of biorenewable fuels and chemicals. Applied Microbiology and Biotechnology. 89: 249-57. PMID 20924577 DOI: 10.1007/S00253-010-2912-9  0.366
2011 Turner PC, Miller EN, Jarboe LR, Baggett CL, Shanmugam KT, Ingram LO. YqhC regulates transcription of the adjacent Escherichia coli genes yqhD and dkgA that are involved in furfural tolerance. Journal of Industrial Microbiology & Biotechnology. 38: 431-9. PMID 20676725 DOI: 10.1007/S10295-010-0787-5  0.348
2011 Jarboe LR, Liu P, Royce LA. Engineering inhibitor tolerance for the production of biorenewable fuels and chemicals Current Opinion in Chemical Engineering. 1: 38-42. DOI: 10.1016/J.Coche.2011.08.003  0.373
2010 Jarboe LR, Zhang X, Wang X, Moore JC, Shanmugam KT, Ingram LO. Metabolic engineering for production of biorenewable fuels and chemicals: contributions of synthetic biology. Journal of Biomedicine & Biotechnology. 2010: 761042. PMID 20414363 DOI: 10.1155/2010/761042  0.335
2010 Miller EN, Turner PC, Jarboe LR, Ingram LO. Genetic changes that increase 5-hydroxymethyl furfural resistance in ethanol-producing Escherichia coli LY180. Biotechnology Letters. 32: 661-7. PMID 20131081 DOI: 10.1007/S10529-010-0209-9  0.368
2010 Jarboe LR, Hyduke DR, Liao JC. Systems Approaches to Unraveling Nitric Oxide Response Networks in Prokaryotes Nitric Oxide. 103-136. DOI: 10.1016/B978-0-12-373866-0.00004-6  0.684
2009 Zhang X, Jantama K, Moore JC, Jarboe LR, Shanmugam KT, Ingram LO. Metabolic evolution of energy-conserving pathways for succinate production in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 106: 20180-5. PMID 19918073 DOI: 10.1073/Pnas.0905396106  0.365
2009 Miller EN, Jarboe LR, Turner PC, Pharkya P, Yomano LP, York SW, Nunn D, Shanmugam KT, Ingram LO. Furfural inhibits growth by limiting sulfur assimilation in ethanologenic Escherichia coli strain LY180. Applied and Environmental Microbiology. 75: 6132-41. PMID 19684179 DOI: 10.1128/Aem.01187-09  0.422
2009 Miller EN, Jarboe LR, Yomano LP, York SW, Shanmugam KT, Ingram LO. Silencing of NADPH-dependent oxidoreductase genes (yqhD and dkgA) in furfural-resistant ethanologenic Escherichia coli. Applied and Environmental Microbiology. 75: 4315-23. PMID 19429550 DOI: 10.1128/Aem.00567-09  0.329
2008 Jarboe LR, Hyduke DR, Tran LM, Chou KJ, Liao JC. Determination of the Escherichia coli S-nitrosoglutathione response network using integrated biochemical and systems analysis. The Journal of Biological Chemistry. 283: 5148-57. PMID 18070885 DOI: 10.1074/Jbc.M706018200  0.714
2007 Jarboe LR, Grabar TB, Yomano LP, Shanmugan KT, Ingram LO. Development of ethanologenic bacteria. Advances in Biochemical Engineering/Biotechnology. 108: 237-61. PMID 17665158 DOI: 10.1007/10_2007_068  0.323
2007 Hyduke DR, Jarboe LR, Tran LM, Chou KJ, Liao JC. Integrated network analysis identifies nitric oxide response networks and dihydroxyacid dehydratase as a crucial target in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 104: 8484-9. PMID 17494765 DOI: 10.1073/Pnas.0610888104  0.71
2005 Zhou B, Beckwith D, Jarboe LR, Liao JC. Markov Chain modeling of pyelonephritis-associated pili expression in uropathogenic Escherichia coli. Biophysical Journal. 88: 2541-53. PMID 15681643 DOI: 10.1529/Biophysj.104.052126  0.484
2005 Jarboe LR. Regulatory networks in escherichia coli: Chemogenomic-based identification of the nitrogen oxide response and stochastic modeling of pap operon regulation Aiche Annual Meeting, Conference Proceedings. 3396.  0.335
2005 Jarboe LR, Hyduke D, Tran LM, Liao JC. Chemogenomic analysis of signaling pathways for reactive nitrogen oxide species in escherichia coli Aiche Annual Meeting, Conference Proceedings. 10384.  0.676
2004 Jarboe LR, Beckwith D, Liao JC. Stochastic modeling of the phase-variable pap operon regulation in uropathogenic Escherichia coli. Biotechnology and Bioengineering. 88: 189-203. PMID 15449298 DOI: 10.1002/Bit.20228  0.483
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