Edina Rosta, Ph.D. - Publications

Affiliations: 
2007 Chemistry University of Southern California, Los Angeles, CA, United States 
Area:
Theoretical Chemistry and Biophysics

58/107 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Badaoui M, Buigues PJ, Berta D, Mandana GM, Gu H, Földes T, Dickson CJ, Hornak V, Kato M, Molteni C, Parsons S, Rosta E. Combined Free-Energy Calculation and Machine Learning Methods for Understanding Ligand Unbinding Kinetics. Journal of Chemical Theory and Computation. PMID 35195418 DOI: 10.1021/acs.jctc.1c00924  0.481
2021 Mateeva T, Klähn M, Rosta E. Structural Dynamics and Catalytic Mechanism of ATP13A2 (PARK9) from Simulations. The Journal of Physical Chemistry. B. 125: 11835-11847. PMID 34676749 DOI: 10.1021/acs.jpcb.1c05337  0.305
2020 Kells A, Koskin V, Rosta E, Annibale A. Correlation functions, mean first passage times, and the Kemeny constant. The Journal of Chemical Physics. 152: 104108. PMID 32171226 DOI: 10.1063/1.5143504  0.313
2020 Faizi F, Deligiannidis G, Rosta E. Efficient Irreversible Monte Carlo Samplers. Journal of Chemical Theory and Computation. PMID 32097548 DOI: 10.1021/Acs.Jctc.9B01135  0.303
2020 Berta D, Buigues PJ, Badaoui M, Rosta E. Cations in motion: QM/MM studies of the dynamic and electrostatic roles of H and Mg ions in enzyme reactions. Current Opinion in Structural Biology. 61: 198-206. PMID 32065923 DOI: 10.1016/J.Sbi.2020.01.002  0.401
2020 Wagner A, Ly KH, Heidary N, Szabó I, Földes T, Assaf KI, Barrow SJ, Sokołowski K, Al-Hada M, Kornienko N, Kuehnel MF, Rosta E, Zebger I, Nau WM, Scherman OA, et al. Host-Guest Chemistry Meets Electrocatalysis: Cucurbit[6]uril on a Au Surface as a Hybrid System in CO Reduction. Acs Catalysis. 10: 751-761. PMID 31929948 DOI: 10.1021/Acscatal.9B04221  0.333
2019 Pereverzev AY, Koczor-Benda Z, Saparbaev E, Kopysov VN, Rosta E, Boyarkin OV. Spectroscopic Evidence for Peptide-Bond-Selective Ultraviolet Photodissociation. The Journal of Physical Chemistry Letters. 206-209. PMID 31846339 DOI: 10.1021/Acs.Jpclett.9B03221  0.314
2019 Fanelli R, Berta D, Foldes T, Rosta E, Atkinson RA, Hofmann HJ, Shankland K, Cobb AJA. Organocatalytic Access to a cis-Cyclopentyl-γ-amino Acid: An Intriguing Model of Selectivity and Formation of a Stable 10/12-Helix from the Corresponding γ/α-Peptide. Journal of the American Chemical Society. PMID 31820966 DOI: 10.1021/Jacs.9B10861  0.301
2019 Olesińska M, Wu G, Gómez-Coca S, Antón-García D, Szabó I, Rosta E, Scherman OA. Modular supramolecular dimerization of optically tunable extended aryl viologens. Chemical Science. 10: 8806-8811. PMID 31803453 DOI: 10.1039/C9Sc03057C  0.317
2019 Noé F, Rosta E. Markov Models of Molecular Kinetics. The Journal of Chemical Physics. 151: 190401. PMID 31757166 DOI: 10.1063/1.5134029  0.31
2019 Kells A, Mihálka ZÉ, Annibale A, Rosta E. Mean first passage times in variational coarse graining using Markov state models. The Journal of Chemical Physics. 150: 134107. PMID 30954057 DOI: 10.1063/1.5083924  0.319
2018 Carnegie C, Griffiths JP, de Nijs B, Readman C, Chikkaraddy R, Deacon WD, Zhang Y, Szabo I, Rosta E, Aizpurua J, Baumberg JJ. Room-Temperature Optical Picocavities Below 1nm Accessing Single-Atom Geometries. The Journal of Physical Chemistry Letters. PMID 30525662 DOI: 10.1021/Acs.Jpclett.8B03466  0.325
2018 Pan X, Rosta E, Shao Y. Representation of the QM Subsystem for Long-Range Electrostatic Interaction in Non-Periodic Ab Initio QM/MM Calculations. Molecules (Basel, Switzerland). 23. PMID 30274290 DOI: 10.3390/Molecules23102500  0.329
2018 Badaoui M, Kells A, Molteni C, Dickson CJ, Hornak V, Rosta E. Calculating Kinetic Rates and Membrane Permeability from Biased Simulation. The Journal of Physical Chemistry. B. PMID 30247032 DOI: 10.1021/Acs.Jpcb.8B07442  0.349
2018 Kells A, Annibale A, Rosta E. Limiting relaxation times from Markov state models. The Journal of Chemical Physics. 149: 072324. PMID 30134666 DOI: 10.1063/1.5027203  0.351
2018 Mueller JW, Idkowiak J, Gesteira TF, Vallet C, Hardman R, van den Boom J, Dhir V, Knauer SK, Rosta E, Arlt W. Human DHEA sulfation requires direct interaction between PAPS synthase 2 and DHEA sulfotransferase SULT2A1. The Journal of Biological Chemistry. PMID 29743239 DOI: 10.1074/Jbc.Ra118.002248  0.313
2018 Huggins DJ, Biggin PC, Dämgen MA, Essex JW, Harris SA, Henchman RH, Khalid S, Kuzmanic A, Laughton CA, Michel J, Mulholland AJ, Rosta E, Sansom MSP, van der Kamp MW. Biomolecular simulations: From dynamics and mechanisms to computational assays of biological activity Wiley Interdisciplinary Reviews: Computational Molecular Science. 9: e1393. DOI: 10.1002/Wcms.1393  0.392
2017 Sharma V, Jambrina PG, Kaukonen M, Rosta E, Rich PR. Insights into functions of the H channel of cytochrome c oxidase from atomistic molecular dynamics simulations. Proceedings of the National Academy of Sciences of the United States of America. PMID 29133387 DOI: 10.1073/Pnas.1708628114  0.323
2017 Stelzl LS, Kells A, Rosta E, Hummer G. Dynamic Histogram Analysis to Determine Free Energies and Rates from Biased Simulations. Journal of Chemical Theory and Computation. PMID 29059525 DOI: 10.1016/J.Bpj.2017.11.3047  0.576
2017 Leahy CT, Kells A, Hummer G, Buchete NV, Rosta E. Peptide dimerization-dissociation rates from replica exchange molecular dynamics. The Journal of Chemical Physics. 147: 152725. PMID 29055328 DOI: 10.1063/1.5004774  0.552
2017 Palma A, Artelsmair M, Wu G, Lu X, Barrow SJ, Uddin N, Rosta E, Masson E, Scherman OA. Cucurbit[7]uril as a Supramolecular Artificial Enzyme for Diels-Alder Reactions. Angewandte Chemie (International Ed. in English). PMID 29048713 DOI: 10.1002/Anie.201706487  0.332
2017 Martini L, Kells A, Covino R, Hummer G, Buchete N, Rosta E. Variational Identification of Markovian Transition States Physical Review X. 7. DOI: 10.1103/Physrevx.7.031060  0.572
2017 Saura P, Suardíaz R, Masgrau L, González-Lafont À, Rosta E, Lluch JM. Understanding the Molecular Mechanism of the Ala-versus-Gly Concept Controlling the Product Specificity in Reactions Catalyzed by Lipoxygenases: A Combined Molecular Dynamics and QM/MM Study of Coral 8R-Lipoxygenase Acs Catalysis. 7: 4854-4866. DOI: 10.1021/Acscatal.7B00842  0.377
2016 Ryan ST, Del Barrio J, Suardíaz R, Ryan DF, Rosta E, Scherman OA. A Dynamic and Responsive Host in Action: Light-Controlled Molecular Encapsulation. Angewandte Chemie (International Ed. in English). PMID 27791303 DOI: 10.1002/Anie.201607693  0.696
2016 Nagy GN, Suardiaz R, Lopata A, Ozohanics O, Vékey K, Brooks BR, Leveles I, Toth J, Vertessy BG, Rosta E. Structural Characterization of Arginine Fingers: Identification of an Arginine Finger for the Pyrophosphatase dUTPases. Journal of the American Chemical Society. PMID 27740761 DOI: 10.1021/Jacs.6B09012  0.702
2016 Sánchez-Sanz G, Tywoniuk B, Matallanas D, Romano D, Nguyen LK, Kholodenko BN, Rosta E, Kolch W, Buchete NV. SARAH Domain-Mediated MST2-RASSF Dimeric Interactions. Plos Computational Biology. 12: e1005051. PMID 27716844 DOI: 10.1371/Journal.Pcbi.1005051  0.303
2016 Leahy CT, Murphy RD, Hummer G, Rosta E, Buchete NV. Coarse Master Equations for Binding Kinetics of Amyloid Peptide Dimers. The Journal of Physical Chemistry Letters. PMID 27323250 DOI: 10.1021/Acs.Jpclett.6B00518  0.541
2016 Chikkaraddy R, de Nijs B, Benz F, Barrow SJ, Scherman OA, Rosta E, Demetriadou A, Fox P, Hess O, Baumberg JJ. Single-molecule strong coupling at room temperature in plasmonic nanocavities. Nature. PMID 27296227 DOI: 10.1038/Nature17974  0.308
2016 Suardiaz R, Garcia Jambrina P, Masgrau L, González-Lafont À, Rosta E, Lluch JM. Understanding the Mechanism of the Hydrogen Abstraction from Arachidonic Acid Catalyzed by the Human Enzyme 15-Lipoxygenase-2. A Quantum Mechanics/Molecular Mechanics Free Energy Simulation. Journal of Chemical Theory and Computation. PMID 26918937 DOI: 10.1021/Acs.Jctc.5B01236  0.737
2016 Hamdan L, Abdel-Maksoud K, Radia R, Boodram J, Man KY, McGregor I, Munteanu C, Muthu K, Poddar J, Roberts J, Sadler S, Siddiqi N, Tam S, Andreou A, Scherman OA, ... Rosta E, et al. Deviation from the anti‑Markovnikov rule: a computational study of the regio‑ and stereoselectivity of diene hydroboration reactions Theoretical Chemistry Accounts. 135: 13. DOI: 10.1007/S00214-015-1768-6  0.381
2015 Jambrina PG, Rauch N, Pilkington R, Rybakova K, Nguyen LK, Kholodenko BN, Buchete NV, Kolch W, Rosta E. Phosphorylation of RAF Kinase Dimers Drives Conformational Changes that Facilitate Transactivation. Angewandte Chemie (International Ed. in English). PMID 26644280 DOI: 10.1002/Anie.201509272  0.306
2015 Rosta E, Hummer G. Free Energies from Dynamic Weighted Histogram Analysis Using Unbiased Markov State Model. Journal of Chemical Theory and Computation. 11: 276-85. PMID 26574225 DOI: 10.1021/Ct500719P  0.589
2015 Zheng L, Sonzini S, Ambarwati M, Rosta E, Scherman OA, Herrmann A. Turning Cucurbit[8]uril into a Supramolecular Nanoreactor for Asymmetric Catalysis. Angewandte Chemie (International Ed. in English). PMID 26383272 DOI: 10.1002/Anie.201505628  0.345
2015 Lopata A, Jambrina PG, Sharma PK, Brooks BR, Toth J, Vertessy BG, Rosta E. Mutations decouple proton transfer from phosphate cleavage in the dutpase catalytic reaction Acs Catalysis. 5: 3225-3237. DOI: 10.1021/Cs502087F  0.576
2014 Wu H, Mey AS, Rosta E, Noé F. Statistically optimal analysis of state-discretized trajectory data from multiple thermodynamic states. The Journal of Chemical Physics. 141: 214106. PMID 25481128 DOI: 10.1063/1.4902240  0.324
2014 Bui S, von Stetten D, Jambrina PG, Prangé T, Colloc'h N, de Sanctis D, Royant A, Rosta E, Steiner RA. Direct evidence for a peroxide intermediate and a reactive enzyme-substrate-dioxygen configuration in a cofactor-free oxidase. Angewandte Chemie (International Ed. in English). 53: 13710-4. PMID 25314114 DOI: 10.1002/Anie.201405485  0.354
2014 Rosta E, Yang W, Hummer G. Calcium inhibition of ribonuclease H1 two-metal ion catalysis. Journal of the American Chemical Society. 136: 3137-44. PMID 24499076 DOI: 10.1021/Ja411408X  0.505
2014 Ganguly A, Thaplyal P, Rosta E, Bevilacqua PC, Hammes-Schiffer S. Quantum mechanical/molecular mechanical free energy simulations of the self-cleavage reaction in the hepatitis delta virus ribozyme. Journal of the American Chemical Society. 136: 1483-96. PMID 24383543 DOI: 10.1021/Ja4104217  0.376
2013 Barabás O, Németh V, Bodor A, Perczel A, Rosta E, Kele Z, Zagyva I, Szabadka Z, Grolmusz VI, Wilmanns M, Vértessy BG. Catalytic mechanism of α-phosphate attack in dUTPase is revealed by X-ray crystallographic snapshots of distinct intermediates, 31P-NMR spectroscopy and reaction path modelling. Nucleic Acids Research. 41: 10542-55. PMID 23982515 DOI: 10.1093/Nar/Gkt756  0.372
2012 Rosta E, Warshel A. On the Origins of the Linear Free Energy Relationships: Exploring the Nature of the Off-Diagonal Coupling Elements in S(N)2 Reactions. Journal of Chemical Theory and Computation. 8: 3574-3585. PMID 23329895 DOI: 10.1021/Ct2009329  0.56
2012 Lans I, Medina M, Rosta E, Hummer G, Garcia-Viloca M, Lluch JM, González-Lafont À. Theoretical study of the mechanism of the hydride transfer between ferredoxin-NADP+ reductase and NADP+: the role of Tyr303. Journal of the American Chemical Society. 134: 20544-53. PMID 23181670 DOI: 10.1021/Ja310331V  0.576
2011 Rosta E, Nowotny M, Yang W, Hummer G. Catalytic mechanism of RNA backbone cleavage by ribonuclease H from quantum mechanics/molecular mechanics simulations. Journal of the American Chemical Society. 133: 8934-41. PMID 21539371 DOI: 10.1021/Ja200173A  0.571
2011 Rosta E, Hummer G. Kinetic Models of Enhanced Sampling Methods Biophysical Journal. 100: 210a. DOI: 10.1016/J.Bpj.2010.12.1358  0.548
2010 Rosta E, Hummer G. Error and efficiency of simulated tempering simulations. The Journal of Chemical Physics. 132: 034102. PMID 20095723 DOI: 10.1063/1.3290767  0.526
2009 Rosta E, Buchete NV, Hummer G. Thermostat artifacts in replica exchange molecular dynamics simulations. Journal of Chemical Theory and Computation. 5: 1393-1399. PMID 20046980 DOI: 10.1021/Ct800557H  0.558
2009 Rosta E, Hummer G. Error and efficiency of replica exchange molecular dynamics simulations. The Journal of Chemical Physics. 131: 165102. PMID 19894977 DOI: 10.1063/1.3249608  0.547
2009 Kamerlin SC, Cao J, Rosta E, Warshel A. On unjustifiably misrepresenting the EVB approach while simultaneously adopting it. The Journal of Physical Chemistry. B. 113: 10905-15. PMID 19606825 DOI: 10.1021/Jp901709F  0.688
2009 Rosta E, Woodcock HL, Brooks BR, Hummer G. Artificial reaction coordinate "tunneling" in free-energy calculations: the catalytic reaction of RNase H. Journal of Computational Chemistry. 30: 1634-41. PMID 19462398 DOI: 10.1002/Jcc.21312  0.584
2009 Rosta E, Woodcock HL, Brooks BR, Hummer G. Artificial Reaction Coordinate “Tunneling” In Free Energy Calculations: Nucleic Acid Cleavage By Ribonuclease-H Biophysical Journal. 96: 573a. DOI: 10.1016/J.Bpj.2008.12.3750  0.58
2008 Rosta E, Haranczyk M, Chu ZT, Warshel A. Accelerating QM/MM free energy calculations: representing the surroundings by an updated mean charge distribution. The Journal of Physical Chemistry. B. 112: 5680-92. PMID 18412414 DOI: 10.1021/Jp711496Y  0.573
2008 Rosta E, Kamerlin SC, Warshel A. On the interpretation of the observed linear free energy relationship in phosphate hydrolysis: a thorough computational study of phosphate diester hydrolysis in solution. Biochemistry. 47: 3725-35. PMID 18307312 DOI: 10.1021/Bi702106M  0.711
2006 Klähn M, Rosta E, Warshel A. On the mechanism of hydrolysis of phosphate monoesters dianions in solutions and proteins. Journal of the American Chemical Society. 128: 15310-23. PMID 17117884 DOI: 10.1021/Ja065470T  0.569
2006 Hong G, Rosta E, Warshel A. Using the constrained DFT approach in generating diabatic surfaces and off diagonal empirical valence bond terms for modeling reactions in condensed phases. The Journal of Physical Chemistry. B. 110: 19570-4. PMID 17004821 DOI: 10.1021/Jp0625199  0.534
2006 Shao Y, Molnar LF, Jung Y, Kussmann J, Ochsenfeld C, Brown ST, Gilbert AT, Slipchenko LV, Levchenko SV, O'Neill DP, DiStasio RA, Lochan RC, Wang T, Beran GJ, Besley NA, ... ... Rosta E, et al. Advances in methods and algorithms in a modern quantum chemistry program package. Physical Chemistry Chemical Physics : Pccp. 8: 3172-91. PMID 16902710 DOI: 10.1039/B517914A  0.522
2006 Rosta E, Klähn M, Warshel A. Towards accurate ab initio QM/MM calculations of free-energy profiles of enzymatic reactions. The Journal of Physical Chemistry. B. 110: 2934-41. PMID 16471904 DOI: 10.1021/Jp057109J  0.58
2005 Klähn M, Braun-Sand S, Rosta E, Warshel A. On possible pitfalls in ab initio quantum mechanics/molecular mechanics minimization approaches for studies of enzymatic reactions. The Journal of Physical Chemistry. B. 109: 15645-50. PMID 16852982 DOI: 10.1021/Jp0521757  0.577
2000 Rosta E, Surjän PR. Interaction of chemical bonds. V Perturbative corrections to geminal-type wave functions International Journal of Quantum Chemistry. 80: 96-104. DOI: 10.1002/1097-461X(2000)80:2<96::Aid-Qua4>3.0.Co;2-8  0.301
1999 Sztáray B, Rosta E, Böcskey Z, Szepes L. Geometry and electronic structure of bis(tetrahydridoborato)bis(cyclopentadienyl)zirconium(IV) Journal of Organometallic Chemistry. 582: 267-272. DOI: 10.1016/S0022-328X(99)00062-5  0.335
Low-probability matches (unlikely to be authored by this person)
1999 Ángyán JG, Rosta E, Surján PR. Covalent bond orders and atomic valences from correlated wavefunctions Chemical Physics Letters. 299: 1-8. DOI: 10.1016/S0009-2614(98)01255-X  0.299
2015 Sánchez-Sanz G, Matallanas D, Nguyen LK, Kholodenko BN, Rosta E, Kolch W, Buchete NV. MST2-RASSF protein-protein interactions through SARAH domains. Briefings in Bioinformatics. PMID 26443615 DOI: 10.1093/Bib/Bbv070  0.296
2019 Wu G, Szabó I, Rosta E, Scherman OA. Cucurbit[8]uril-mediated pseudo[2,3]rotaxanes. Chemical Communications (Cambridge, England). 55: 13227-13230. PMID 31631210 DOI: 10.1039/C9Cc07144J  0.291
2002 Rosta E, Surján PR. Two-body zeroth order Hamiltonians in multireference perturbation theory: The APSG reference state Journal of Chemical Physics. 116: 878-890. DOI: 10.1063/1.1427918  0.29
2014 Jambrina PG, Bohuszewicz O, Buchete NV, Kolch W, Rosta E. Molecular mechanisms of asymmetric RAF dimer activation. Biochemical Society Transactions. 42: 784-90. PMID 25109958 DOI: 10.1042/Bst20140025  0.286
2020 Jenkins K, Mateeva T, Szabó I, Melnik A, Picotti P, Csikász-Nagy A, Rosta E. Combining data integration and molecular dynamics for target identification in α-Synuclein-aggregating neurodegenerative diseases: Structural insights on Synaptojanin-1 (Synj1). Computational and Structural Biotechnology Journal. 18: 1032-1042. PMID 32419904 DOI: 10.1016/J.Csbj.2020.04.010  0.284
2016 Del Barrio J, Ryan ST, Jambrina PG, Rosta E, Scherman OA. Light-regulated Molecular Trafficking in a Synthetic Water-soluble Host. Journal of the American Chemical Society. PMID 26876686 DOI: 10.1021/Jacs.5B11642  0.283
2016 Ryan STJ, del Barrio J, Suardíaz R, Ryan DF, Rosta E, Scherman OA. Inside Cover: A Dynamic and Responsive Host in Action: Light-Controlled Molecular Encapsulation (Angew. Chem. Int. Ed. 52/2016) Angewandte Chemie International Edition. 55: 15932-15932. DOI: 10.1002/Anie.201611808  0.283
2020 Faulkner M, Szabó I, Weetman SL, Sicard F, Huber RG, Bond PJ, Rosta E, Liu LN. Molecular simulations unravel the molecular principles that mediate selective permeability of carboxysome shell protein. Scientific Reports. 10: 17501. PMID 33060756 DOI: 10.1038/s41598-020-74536-5  0.282
2020 Cook NJ, Li W, Berta D, Badaoui M, Ballandras-Colas A, Nans A, Kotecha A, Rosta E, Engelman AN, Cherepanov P. Structural basis of second-generation HIV integrase inhibitor action and viral resistance. Science (New York, N.Y.). PMID 32001525 DOI: 10.1126/Science.Aay4919  0.281
2013 Pesnot T, Tedaldi LM, Jambrina PG, Rosta E, Wagner GK. Exploring the role of the 5-substituent for the intrinsic fluorescence of 5-aryl and 5-heteroaryl uracil nucleotides: a systematic study. Organic & Biomolecular Chemistry. 11: 6357-71. PMID 23945704 DOI: 10.1039/C3Ob40485D  0.278
2016 Ryan STJ, del Barrio J, Suardíaz R, Ryan DF, Rosta E, Scherman OA. Innentitelbild: A Dynamic and Responsive Host in Action: Light-Controlled Molecular Encapsulation (Angew. Chem. 52/2016) Angewandte Chemie. 128: 16164-16164. DOI: 10.1002/Ange.201611808  0.278
2023 Koczor-Benda Z, Mateeva T, Rosta E. Direct Calculation of Electron Transfer Rates with the Binless Dynamic Histogram Analysis Method. The Journal of Physical Chemistry Letters. 14: 9935-9942. PMID 37903301 DOI: 10.1021/acs.jpclett.3c02624  0.276
2019 de Nijs B, Carnegie C, Szabo I, Grys DB, Chikkaraddy R, Kamp M, Barrow SJ, Readman C, Kleemann ME, Scherman OA, Rosta E, Baumberg JJ. Inhibiting Analyte Theft in SERS Substrates: sub-Nanomolar Quantitative Drug Detection. Acs Sensors. PMID 31565921 DOI: 10.1021/Acssensors.9B01484  0.274
2019 Readman C, de Nijs B, Szabo I, Demetriadou A, Greenhalgh RD, Durkan C, Rosta E, Scherman O, Baumberg JJ. Anomalously large spectral shifts near the quantum tunnelling limit in plasmonic rulers with subatomic resolution. Nano Letters. PMID 30726095 DOI: 10.1021/Acs.Nanolett.9B00199  0.271
2020 Berta D, Szabó I, Scherman OA, Rosta E. Toward Understanding CB[7]-Based Supramolecular Diels-Alder Catalysis. Frontiers in Chemistry. 8: 587084. PMID 33240848 DOI: 10.3389/fchem.2020.587084  0.266
2021 Sicard F, Koskin V, Annibale A, Rosta E. Position-Dependent Diffusion from Biased Simulations and Markov State Model Analysis. Journal of Chemical Theory and Computation. PMID 33728916 DOI: 10.1021/acs.jctc.0c01151  0.265
2015 Andreou A, Leskes M, Jambrina PG, Tustin GJ, Grey CP, Rosta E, Scherman OA. Divergence from the classical hydroboration reactivity; boron containing materials through a hydroboration cascade of small cyclic dienes. Chemical Science. 6: 6262-6269. PMID 30090245 DOI: 10.1039/C4Sc02729A  0.264
2017 de Nijs B, Kamp M, Szabó I, Barrow SJ, Benz F, Wu G, Carnegie C, Chikkaraddy R, Wang W, Deacon WM, Rosta E, Baumberg JJ, Scherman OA. Smart supramolecular sensing with cucurbit[n]urils: probing hydrogen bonding with SERS. Faraday Discussions. PMID 28932831 DOI: 10.1039/C7Fd00147A  0.263
2020 Wu G, Bae YJ, Olesińska M, Antón-García D, Szabó I, Rosta E, Wasielewski MR, Scherman OA. Controlling the structure and photophysics of fluorophore dimers using multiple cucurbit[8]uril clampings Chemical Science. 11: 812-825. DOI: 10.1039/C9Sc04587B  0.262
2019 Pereverzev AY, Szabó I, Kopysov VN, Rosta E, Boyarkin OV. Gas-phase structures reflect the pain-relief potency of enkephalin peptides. Physical Chemistry Chemical Physics : Pccp. PMID 31579899 DOI: 10.1039/C9Cp04098F  0.26
2020 Ojambati OS, Deacon WM, Chikkaraddy R, Readman C, Lin Q, Koczor-Benda Z, Rosta E, Scherman OA, Baumberg JJ. Breaking the Selection Rules of Spin-Forbidden Molecular Absorption in Plasmonic Nanocavities Acs Photonics. 7: 2337-2342. DOI: 10.1021/Acsphotonics.0C00732  0.258
2021 McGregor L, Földes T, Bui S, Moulin M, Coquelle N, Blakeley MP, Rosta E, Steiner RA. Joint neutron/X-ray crystal structure of a mechanistically relevant complex of perdeuterated urate oxidase and simulations provide insight into the hydration step of catalysis. Iucrj. 8: 46-59. PMID 33520242 DOI: 10.1107/S2052252520013615  0.247
2018 Rukhlenko OS, Khorsand F, Krstic A, Rozanc J, Alexopoulos LG, Rauch N, Erickson KE, Hlavacek WS, Posner RG, Gómez-Coca S, Rosta E, Fitzgibbon C, Matallanas D, Rauch J, Kolch W, et al. Dissecting RAF Inhibitor Resistance by Structure-based Modeling Reveals Ways to Overcome Oncogenic RAS Signaling. Cell Systems. PMID 30007540 DOI: 10.1016/J.Cels.2018.06.002  0.244
2017 McCune JA, Rosta E, Scherman OA. Modulating the oxidation of cucurbit[n]urils. Organic & Biomolecular Chemistry. PMID 28074946 DOI: 10.1039/C6Ob02594C  0.241
2017 Di Martino G, Turek VA, Lombardi A, Szabo I, de Nijs B, Kuhn A, Rosta E, Baumberg JJ. Tracking nano-electrochemistry using individual plasmonic nanocavities. Nano Letters. PMID 28686457 DOI: 10.1021/Acs.Nanolett.7B01676  0.239
2021 Berta D, Badaoui M, Martino SA, Buigues PJ, Pisliakov AV, Elghobashi-Meinhardt N, Wells G, Harris SA, Frezza E, Rosta E. Modelling the active SARS-CoV-2 helicase complex as a basis for structure-based inhibitor design. Chemical Science. 12: 13492-13505. PMID 34777769 DOI: 10.1039/d1sc02775a  0.233
2020 Faizi F, Buigues PJ, Deligiannidis G, Rosta E. Simulated tempering with irreversible Gibbs sampling techniques. The Journal of Chemical Physics. 153: 214111. PMID 33291930 DOI: 10.1063/5.0025775  0.23
2015 Zheng L, Sonzini S, Ambarwati M, Rosta E, Scherman OA, Herrmann A. Turning Cucurbit[8]uril into a Supramolecular Nanoreactor for Asymmetric Catalysis. Angewandte Chemie (Weinheim An Der Bergstrasse, Germany). 127: 13199-13203. PMID 27478269 DOI: 10.1002/ange.201505628  0.22
2022 Lin Q, Hu S, Földes T, Huang J, Wright D, Griffiths J, Elliott E, de Nijs B, Rosta E, Baumberg JJ. Optical suppression of energy barriers in single molecule-metal binding. Science Advances. 8: eabp9285. PMID 35749500 DOI: 10.1126/sciadv.abp9285  0.206
2007 Bonaiuto J, Rosta E, Arbib M. Extending the mirror neuron system model, I: Audible actions and invisible grasps Biological Cybernetics. 96: 9-38. PMID 17028884 DOI: 10.1007/S00422-006-0110-8  0.203
2019 Wu G, Bae YJ, Olesińska M, Antón-García D, Szabó I, Rosta E, Wasielewski MR, Scherman OA. Controlling the structure and photophysics of fluorophore dimers using multiple cucurbit[8]uril clampings. Chemical Science. 11: 812-825. PMID 34123057 DOI: 10.1039/c9sc04587b  0.192
2021 Griffiths J, Földes T, de Nijs B, Chikkaraddy R, Wright D, Deacon WM, Berta D, Readman C, Grys DB, Rosta E, Baumberg JJ. Resolving sub-angstrom ambient motion through reconstruction from vibrational spectra. Nature Communications. 12: 6759. PMID 34799553 DOI: 10.1038/s41467-021-26898-1  0.19
2020 Kos D, Di Martino G, Boehmke A, de Nijs B, Berta D, Földes T, Sangtarash S, Rosta E, Sadeghi H, Baumberg JJ. Optical probes of molecules as nano-mechanical switches. Nature Communications. 11: 5905. PMID 33219231 DOI: 10.1038/s41467-020-19703-y  0.179
2023 Buigues PJ, Gehrke S, Badaoui M, Dudas B, Mandana G, Qi T, Bottegoni G, Rosta E. Investigating the Unbinding of Muscarinic Antagonists from the Muscarinic 3 Receptor. Journal of Chemical Theory and Computation. PMID 37458730 DOI: 10.1021/acs.jctc.3c00023  0.178
2021 Pan X, Nam K, Epifanovsky E, Simmonett AC, Rosta E, Shao Y. A simplified charge projection scheme for long-range electrostatics in ab initio QM/MM calculations. The Journal of Chemical Physics. 154: 024115. PMID 33445891 DOI: 10.1063/5.0038120  0.168
2023 Di Mino C, Seel AG, Clancy AJ, Headen TF, Földes T, Rosta E, Sella A, Skipper NT. Strong structuring arising from weak cooperative O-H···π and C-H···O hydrogen bonding in benzene-methanol solution. Nature Communications. 14: 5900. PMID 37736749 DOI: 10.1038/s41467-023-41451-y  0.161
2023 Berta D, Gehrke S, Nyíri K, Vértessy BG, Rosta E. Mechanism-Based Redesign of GAP to Activate Oncogenic Ras. Journal of the American Chemical Society. PMID 37682266 DOI: 10.1021/jacs.3c04330  0.154
2021 Sokołowski K, Huang J, Földes T, McCune JA, Xu DD, de Nijs B, Chikkaraddy R, Collins SM, Rosta E, Baumberg JJ, Scherman OA. Nanoparticle surfactants for kinetically arrested photoactive assemblies to track light-induced electron transfer. Nature Nanotechnology. PMID 34475556 DOI: 10.1038/s41565-021-00949-6  0.151
2022 Mueller NS, Arul R, Jakob LA, Blunt MO, Földes T, Rosta E, Baumberg JJ. Collective Mid-Infrared Vibrations in Surface-Enhanced Raman Scattering. Nano Letters. PMID 36037474 DOI: 10.1021/acs.nanolett.2c02806  0.147
2021 Topf M, Rosta E, Bowman GR, Bonomi M. Editorial: Experiments and Simulations: A to Unravel Biological Function. Frontiers in Molecular Biosciences. 8: 799406. PMID 34912853 DOI: 10.3389/fmolb.2021.799406  0.129
2022 Koczor-Benda Z, Roelli P, Galland C, Rosta E. Molecular Vibration Explorer: an Online Database and Toolbox for Surface-Enhanced Frequency Conversion and Infrared and Raman Spectroscopy. The Journal of Physical Chemistry. A. PMID 35792893 DOI: 10.1021/acs.jpca.2c03700  0.128
2023 Kolch W, Berta D, Rosta E. Dynamic regulation of RAS and RAS signaling. The Biochemical Journal. 480: 1-23. PMID 36607281 DOI: 10.1042/BCJ20220234  0.107
2023 Niihori M, Földes T, Readman CA, Arul R, Grys DB, Nijs B, Rosta E, Baumberg JJ. SERS Sensing of Dopamine with Fe(III)-Sensitized Nanogaps in Recleanable AuNP Monolayer Films. Small (Weinheim An Der Bergstrasse, Germany). e2302531. PMID 37605460 DOI: 10.1002/smll.202302531  0.102
2023 Koskin V, Kells A, Clayton J, Hartmann AK, Annibale A, Rosta E. Variational kinetic clustering of complex networks. The Journal of Chemical Physics. 158: 104112. PMID 36922127 DOI: 10.1063/5.0105099  0.102
2015 Andreou A, Leskes M, Jambrina PG, Tustin GJ, Grey CP, Rosta E, Scherman OA. Divergence from the classical hydroboration reactivity; boron containing materials through a hydroboration cascade of small cyclic dienes Chemical Science. 6: 6262-6269. DOI: 10.1039/c4sc02729a  0.083
2021 Xomalis A, Zheng X, Chikkaraddy R, Koczor-Benda Z, Miele E, Rosta E, Vandenbosch GAE, Martínez A, Baumberg JJ. Detecting mid-infrared light by molecular frequency upconversion in dual-wavelength nanoantennas. Science (New York, N.Y.). 374: 1268-1271. PMID 34855505 DOI: 10.1126/science.abk2593  0.075
2022 Peng J, Lin Q, Földes T, Jeong HH, Xiong Y, Pitsalidis C, Malliaras GG, Rosta E, Baumberg JJ. Spectro-Electrochemistry of Conductive Polymers Using Plasmonics to Reveal Doping Mechanisms. Acs Nano. PMID 36468680 DOI: 10.1021/acsnano.2c09081  0.064
2012 Rosta E, Almási Z, Karácsony I, Konkolÿ Thege B, Hegedűs K. [Health behavior of medical students. Introduction of mental hygienic skills in the medical education in Hungary]. Orvosi Hetilap. 153: 1153-7. PMID 22805041 DOI: 10.1556/OH.2012.29374  0.01
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