Valeri A. Barsegov, Ph.D. - Publications

Affiliations: 
2000 University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Condensed Phase Chemical Dynamics

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Litvinov RI, Kononova O, Zhmurov A, Marx KA, Barsegov V, Thirumalai D, Weisel JW. Molecular Mechanisms of Transition from Catch to Slip Bonds in Fibrin Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.1865  0.4
2018 Litvinov RI, Zuev YF, Idiyatullin BZ, Bakirova DR, Sitnitsky AE, Zhmurov A, Barsegov V, Weisel JW. Non-Enzymatic Self-Association of Fibrinogen in Solution Studied with 1 H NMR Spectrometry Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.2256  0.4
2017 Litvinov RI, Kononova O, Blokhin DS, Klochkov VV, Barsegov V, Bennett JS, Weisel JW. Comparison of the RGD- and AGDV-Containing Peptide Interactions with the Platelet Integrin Alphaiibbeta3 Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.1898  0.4
2016 Kononova O, Snijder J, Kholodov Y, Marx KA, Wuite GJ, Roos WH, Barsegov V. Fluctuating Nonlinear Spring Model of Mechanical Deformation of Biological Particles. Plos Computational Biology. 12: e1004729. PMID 26821264 DOI: 10.1371/Journal.Pcbi.1004729  0.4
2016 Litvinov RI, Kononova O, Blokhin DS, Klochkov VV, Weisel JW, Barsegov V, Bennett JS. Characterization of the Interactions of Arg-Gly-Asp- and Ala-Gly-Asp-Val-Containing Peptides with the Platelet Integrin αIIbβ3 Blood. 128: 1350-1350. DOI: 10.1182/Blood.V128.22.1350.1350  0.4
2013 Kononova O, Snijder J, Brasch M, Cornelissen J, Dima RI, Marx KA, Wuite GJL, Roos WH, Barsegov V. Structural transitions and energy landscape for cowpea chlorotic mottle virus capsid mechanics from nanomanipulation in vitro and in silico Biophysical Journal. 105: 1893-1903. PMID 24138865 DOI: 10.1016/J.Bpj.2013.08.032  0.4
2013 Litvinov RI, Yarovoi SV, Rauova L, Barsegov V, Sachais BS, Rux AH, Hinds JL, Arepally GM, Cines DB, Weisel JW. Distinct specificity and single-molecule kinetics characterize the interaction of pathogenic and non-pathogenic antibodies against platelet factor 4-heparin complexes with platelet factor 4. The Journal of Biological Chemistry. 288: 33060-70. PMID 24097975 DOI: 10.1074/Jbc.M113.481598  0.4
2013 Kononova O, Litvinov RI, Zhmurov A, Alekseenko A, Cheng CH, Agarwal S, Marx KA, Weisel JW, Barsegov V. Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrin. The Journal of Biological Chemistry. 288: 22681-92. PMID 23720752 DOI: 10.1074/Jbc.M113.472365  0.4
2013 Toubar RA, Zhmurov A, Barsegov V, Marx KA. Comparative simulation studies of native and single-site mutant human beta-defensin-1 peptides Journal of Biomolecular Structure and Dynamics. 31: 174-194. PMID 22830355 DOI: 10.1080/07391102.2012.698381  0.4
2013 Litvinov RI, Faizullin DA, Zuev YF, Zhmurov A, Kononova O, Barsegov V, Weisel JW. Structural Molecular Origins of Fibrin Mechanics Biophysical Journal. 104. DOI: 10.1016/J.Bpj.2012.11.363  0.4
2012 Zhmurov A, Kononova O, Litvinov RI, Dima RI, Barsegov V, Weisel JW. Mechanical transition from α-helical coiled coils to β-sheets in fibrin(ogen). Journal of the American Chemical Society. 134: 20396-402. PMID 22953986 DOI: 10.1021/Ja3076428  0.4
2012 Litvinov RI, Mekler A, Shuman H, Bennett JS, Barsegov V, Weisel JW. Resolving two-dimensional kinetics of the integrin αIIbβ3-fibrinogen interactions using binding-unbinding correlation spectroscopy. The Journal of Biological Chemistry. 287: 35275-85. PMID 22893701 DOI: 10.1074/Jbc.M112.404848  0.4
2012 Litvinov RI, Faizullin DA, Zuev YF, Zhmurov A, Kononova O, Barsegov V, Weisel JW. Molecular Basis of Biomechanics of Hemostasis and Thrombosis: Structural Molecular Transitions Underlying Deformation of Fibrin Clots and Thrombi. Blood. 120: 2217-2217. DOI: 10.1182/Blood.V120.21.2217.2217  0.4
2012 Zhmurov AA, Barsegov VA, Trifonov SV, Kholodov YA, Kholodov AS. Langevin dynamics simulations of micromechanics on graphics processors Mathematical Models and Computer Simulations. 4: 272-287. DOI: 10.1134/S2070048212030106  0.4
2011 Zhmurov A, Brown AE, Litvinov RI, Dima RI, Weisel JW, Barsegov V. Mechanism of fibrin(ogen) forced unfolding. Structure (London, England : 1993). 19: 1615-24. PMID 22078561 DOI: 10.1016/J.Str.2011.08.013  0.4
2011 Duan L, Zhmurov A, Barsegov V, Dima RI. Exploring the mechanical stability of the C2 domains in human synaptotagmin 1. The Journal of Physical Chemistry. B. 115: 10133-46. PMID 21776988 DOI: 10.1021/Jp2025945  0.4
2011 Litvinov RI, Barsegov V, Schissler AJ, Fisher AR, Bennett JS, Weisel JW, Shuman H. Dissociation of bimolecular αIIbβ3-fibrinogen complex under a constant tensile force. Biophysical Journal. 100: 165-73. PMID 21190668 DOI: 10.1016/J.Bpj.2010.11.019  0.4
2011 Litvinov RI, Barsegov V, Mekler A, Weisel JW, Bennett JS. The PLATELET INTEGRIN αIIbβ3 CHANGES FROM A LOWER- to A Higher-AFFINITY STATE DURING INTERACTION with FIBRINOGEN Blood. 118: 1130-1130. DOI: 10.1182/Blood.V118.21.1130.1130  0.4
2011 Zhmurov A, Rybnikov K, Kholodov Y, Barsegov V. Generation of random numbers on graphics processors: Forced indentation in silico of the bacteriophage HK97 Journal of Physical Chemistry B. 115: 5278-5288. DOI: 10.1021/Jp109079T  0.4
2010 Zhmurov A, Dima RI, Barsegov V. Order statistics theory of unfolding of multimeric proteins Biophysical Journal. 99: 1959-1968. PMID 20858442 DOI: 10.1016/J.Bpj.2010.07.012  0.4
2010 Zhmurov A, Dima RI, Kholodov Y, Barsegov V. SOP-GPU: Accelerating biomolecular simulations in the centisecond timescale using graphics processors Proteins: Structure, Function and Bioinformatics. 78: 2984-2999. PMID 20715052 DOI: 10.1002/Prot.22824  0.4
2008 Barsegov V, Morrison G, Thirumalai D. Role of internal chain dynamics on the rupture kinetic of adhesive contacts. Physical Review Letters. 100: 248102. PMID 18643632 DOI: 10.1103/Physrevlett.100.248102  0.4
2007 Raman EP, Takeda T, Barsegov V, Klimov DK. Mechanical unbinding of abeta peptides from amyloid fibrils. Journal of Molecular Biology. 373: 785-800. PMID 17868685 DOI: 10.1016/J.Jmb.2007.08.034  0.4
2007 Bura E, Klimov DK, Barsegov V. Analyzing forced unfolding of protein tandems by ordered variates, 1: Independent unfolding times Biophysical Journal. 93: 1100-1115. PMID 17496033 DOI: 10.1529/Biophysj.107.105866  0.4
2007 Raman EP, Barsegov V, Klimov DK. Folding of tandem-linked domains. Proteins. 67: 795-810. PMID 17380511 DOI: 10.1002/Prot.21339  0.4
2006 Barsegov V, Klimov DK, Thirumalai D. Mapping the energy landscape of biomolecules using single molecule force correlation spectroscopy: Theory and applications Biophysical Journal. 90: 3827-3841. PMID 16533852 DOI: 10.1529/Biophysj.105.075937  0.4
2006 Barsegov V, Thirumalai D. Dynamic competition between catch and slip bonds in selectins bound to ligands Journal of Physical Chemistry B. 110: 26403-26412. DOI: 10.1021/Jp0653306  0.4
2006 Zhao X, Rossi P, Barsegov V, Zhou J, Woodford JN, Harbison GS. Temperature dependent deuterium quadrupole coupling constants of short hydrogen bonds Journal of Molecular Structure. 790: 152-159. DOI: 10.1016/J.Molstruc.2005.10.053  0.4
2005 Barsegov V, Thirumalai D. Influence of surface interactions on folding and forced unbinding of semiflexible chains Journal of Physical Chemistry B. 109: 21979-21988. PMID 16853856 DOI: 10.1021/Jp053803N  0.4
2005 Barsegov V, Thirumalai D. Probing protein-protein interactions by dynamic force correlation spectroscopy Physical Review Letters. 95. PMID 16241846 DOI: 10.1103/Physrevlett.95.168302  0.4
2005 Barsegov V, Thirumalai D. Dynamics of unbinding of cell adhesion molecules: Transition from catch to slip bonds Proceedings of the National Academy of Sciences of the United States of America. 102: 1835-1839. PMID 15701706 DOI: 10.1073/Pnas.0406938102  0.4
2004 Barsegov V, Rossky PJ. Constructing quantum dynamics from mixed quantum-classical descriptions Chemical Physics. 296: 103-115. DOI: 10.1016/J.Chemphys.2003.08.020  0.4
2003 Barsegov V, Shapir Y, Mukamel S. One-dimensional transport with dynamic disorder. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 011101. PMID 12935121 DOI: 10.1103/Physreve.68.011101  0.4
2003 Petrosky T, Ting CO, Barsegov V. Decoherence in a field and time-symmetry breaking Chaos, Solitons and Fractals. 16: 381-390. DOI: 10.1016/S0960-0779(02)00298-9  0.4
2002 Petrosky T, Barsegov V. Quantum decoherence, Zeno process, and time symmetry breaking Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 65. DOI: 10.1103/Physreve.65.046102  0.4
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