Zhiyun Yu, Ph.D. - Publications

Affiliations: 
2004 Columbia University, New York, NY 
Area:
Computational Chemistry

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Liang G, Gu Z, Li Y, Fu J, Shen Y, Wei Y, Tan L, Zhang P, Han Y, Chen C, Zhang R, Chen K, Chen H, Liu Y, Cui Y, ... ... Yu Z, et al. Comparison of the Masaoka-Koga staging and the International Association for the Study of Lung Cancer/the International Thymic Malignancies Interest Group proposal for the TNM staging systems based on the Chinese Alliance for Research in Thymomas retrospective database. Journal of Thoracic Disease. 8: 727-37. PMID 27114841 DOI: 10.21037/jtd.2016.03.22  0.32
2016 Wang F, Pang L, Fu J, Shen Y, Wei Y, Tan L, Zhang P, Han Y, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, Cui Y, ... ... Yu Z, et al. Postoperative survival for patients with thymoma complicating myasthenia gravis-preliminary retrospective results of the ChART database. Journal of Thoracic Disease. 8: 711-7. PMID 27114839 DOI: 10.21037/jtd.2016.02.07  0.32
2016 Ma K, Gu Z, Han Y, Fu J, Shen Y, Wei Y, Tan L, Zhang P, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, Cui Y, ... ... Yu Z, et al. The application of postoperative chemotherapy in thymic tumors and its prognostic effect. Journal of Thoracic Disease. 8: 696-704. PMID 27114837 DOI: 10.21037/jtd.2016.03.31  0.32
2016 Gu Z, Fu J, Shen Y, Wei Y, Tan L, Zhang P, Han Y, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, Cui Y, Wang Y, ... ... Yu Z, et al. Thymectomy versus tumor resection for early-stage thymic malignancies: a Chinese Alliance for Research in Thymomas retrospective database analysis. Journal of Thoracic Disease. 8: 680-6. PMID 27114835 DOI: 10.21037/jtd.2016.03.16  0.32
2016 Wang H, Gu Z, Ding J, Tan L, Fu J, Shen Y, Wei Y, Zhang P, Han Y, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, ... ... Yu Z, et al. Perioperative outcomes and long-term survival in clinically early-stage thymic malignancies: video-assisted thoracoscopic thymectomy versus open approaches. Journal of Thoracic Disease. 8: 673-9. PMID 27114834 DOI: 10.21037/jtd.2016.03.05  0.32
2016 Wei Y, Gu Z, Shen Y, Fu J, Tan L, Zhang P, Han Y, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, Cui Y, Wang Y, ... ... Yu Z, et al. Preoperative induction therapy for locally advanced thymic tumors: a retrospective analysis using the ChART database. Journal of Thoracic Disease. 8: 665-72. PMID 27114833 DOI: 10.21037/jtd.2016.03.02  0.32
2016 Yue J, Gu Z, Yu Z, Zhang H, Ma Z, Liu Y, Fang W. Pretreatment biopsy for histological diagnosis and induction therapy in thymic tumors. Journal of Thoracic Disease. 8: 656-64. PMID 27114832 DOI: 10.21037/jtd.2016.03.04  0.32
2016 Fang W, Fu J, Shen Y, Wei Y, Tan L, Zhang P, Han Y, Chen C, Zhang R, Li Y, Chen K, Chen H, Liu Y, Cui Y, Wang Y, ... ... Yu Z, et al. Management of thymic tumors-consensus based on the Chinese Alliance for Research in Thymomas Multi-institutional retrospective studies. Journal of Thoracic Disease. 8: 641-5. PMID 27114830 DOI: 10.21037/jtd.2016.03.23  0.32
2016 Wang Y, Yu H, Shan Y, Tao C, Wu F, Yu Z, Guo P, Huang J, Li J, Zhu Q, Yu F, Song Q, Shi H, Zhou M, Chen G. EphA1 activation promotes the homing of endothelial progenitor cells to hepatocellular carcinoma for tumor neovascularization through the SDF-1/CXCR4 signaling pathway. Journal of Experimental & Clinical Cancer Research : Cr. 35: 65. PMID 27066828 DOI: 10.1186/s13046-016-0339-6  0.36
2016 Duan M, Liu Y, Yu Z, Baudry J, Li L, Wang C, Axmacher JC. Disentangling effects of abiotic factors and biotic interactions on cross-taxon congruence in species turnover patterns of plants, moths and beetles. Scientific Reports. 6: 23511. PMID 27032533 DOI: 10.1038/srep23511  0.32
2016 Li Y, Ma C, Zhou T, Liu Y, Sun L, Yu Z. TRIM65 negatively regulates p53 through ubiquitination. Biochemical and Biophysical Research Communications. PMID 27012201 DOI: 10.1016/j.bbrc.2016.03.093  0.32
2016 Zeng QL, Li CX, Zhang DW, Li W, Xu GH, Yu ZJ. Letter: safety and efficacy of sofosbuvir plus daclatasvir with ribavirin for 12 weeks in Chinese treatment-experienced cirrhotic genotype 1b patients with HCV. Alimentary Pharmacology & Therapeutics. 43: 842-3. PMID 26932414 DOI: 10.1111/apt.13541  0.36
2016 Li H, Hu P, Zhao X, Yu Z, Li L. Bacillus thuringiensis peptidoglycan hydrolase SleB171 involved in daughter cell separation during cell division. Acta Biochimica Et Biophysica Sinica. PMID 26922318 DOI: 10.1093/abbs/gmw004  0.32
2016 Zhou G, Liu X, Li Y, Xu S, Ma C, Wu X, Cheng Y, Yu Z, Zhao G, Chen Y. Telomere targeting with a novel G-quadruplex-interactive ligand BRACO-19 induces T-loop disassembly and telomerase displacement in human glioblastoma cells. Oncotarget. PMID 26908447 DOI: 10.18632/oncotarget.7483  0.32
2016 Xie L, Fang W, Deng W, Yu Z, Li J, Chen M, Liao W, Xie J, Pan W. Global profiling of Lysine Acetylation in Human Histoplasmosis Pathogen Histoplasma capsulatum. The International Journal of Biochemistry & Cell Biology. PMID 26806293 DOI: 10.1016/j.biocel.2016.01.008  0.36
2016 Cai M, Yu Z, Wang L, Song X, Zhang J, Zhang Z, Zhang W, Li W, Cai D, Xiang J. Tongxinluo reduces brain edema and inhibits post-ischemic inflammation after middle cerebral artery occlusion in rats. Journal of Ethnopharmacology. PMID 26805468 DOI: 10.1016/j.jep.2016.01.026  0.36
2016 Gao X, Fan L, Li H, Li J, Liu X, Sun R, Yu Z. Hepatic injury is associated with cell cycle arrest and apoptosis with alteration of cyclin A and D1 in ammonium chloride-induced hyperammonemic rats Experimental and Therapeutic Medicine. 11: 427-434. DOI: 10.3892/etm.2015.2931  0.36
2016 Wang L, Yu Z, Peng Z, Chen Y, Xiang G, Liu Q, Liu Y, Chen D. Catalytic Properties of TiO2/Fe3O4 Nanoparticles in Plasma Chemical Treatment Russian Journal of Physical Chemistry A. 90: 777-782. DOI: 10.1134/S0036024416040178  0.32
2016 Yu Z, Liu Y, Tinsley B, Shabana AA. Integration of geometry and analysis for vehicle system applications: Continuum-based leaf spring and tire assembly Journal of Computational and Nonlinear Dynamics. 11. DOI: 10.1115/1.4031151  0.32
2016 Wang Y, Li J, Long H, Luo H, Zhou B, Xie Y, Li S, Wei Q, Yu Z. A periodic magnetic field assisted chemical vapor deposition technique to fabricate diamond film with preferred orientation Surface and Coatings Technology. 292: 49-53. DOI: 10.1016/j.surfcoat.2016.03.026  0.36
2016 Shi Y, Yu Z, Man J, Ma S, Gao Z, Zhang Y. Tillage practices affect dry matter accumulation and grain yield in winter wheat in the North China Plain Soil and Tillage Research. 160: 73-81. DOI: 10.1016/j.still.2016.02.009  0.32
2016 Huang J, Zhang Y, Jiang L, Yu Z. Comparative proteomics analysis of differential proteins in response to 6-benzylaminopurine treatment in Pteridium aquilinum senescence Postharvest Biology and Technology. 116: 66-74. DOI: 10.1016/j.postharvbio.2015.12.030  0.32
2016 Li C, Yuan Y, Yang J, Yu Z, Peng F, Wu B, Zhang Y, Yuan L, Hua Y, Shu P. Inconsistency measurement between two branches of LiNbO3 integrated optic Y-junction Optics Communications. 369: 152-158. DOI: 10.1016/j.optcom.2016.02.049  0.32
2016 Liu Y, Yu Z, Zeng M, Zhang Y. LLE for submersible plunger pump fault diagnosis via joint wavelet and SVD approach Neurocomputing. 185: 202-211. DOI: 10.1016/j.neucom.2015.12.054  0.32
2016 Liu Y, Yu Z, Zeng M, Zhang Y. An improved LLE algorithm based on iterative shrinkage for machinery fault diagnosis Measurement: Journal of the International Measurement Confederation. 77: 246-256. DOI: 10.1016/j.measurement.2015.09.007  0.32
2016 Ma L, Zhang L, Zhao P, Hu N, Gong Z, Ye W, Wei Q, Zhou K, Yu Z, Zhang Y. A new design of composites for thermal management: Aluminium reinforced with continuous CVD diamond coated W spiral wires Materials and Design. 101: 109-116. DOI: 10.1016/j.matdes.2016.03.145  0.32
2016 Zou R, Yu Z, Li W, Guo M, Li J. Influence of porous structure on the machining performance of micro EDM Journal of Materials Processing Technology. 232: 43-51. DOI: 10.1016/j.jmatprotec.2016.01.027  0.36
2016 Zhang Y, Liu H, Yu Z, Wang K, Wang Y, Yin J. Sodium dehydroacetate levels in chicken tissues Journal of Food Composition and Analysis. 47: 31-37. DOI: 10.1016/j.jfca.2015.12.008  0.32
2016 Wu C, Yu Z, Yang Y, Sun K, Nie J, Liu Y, Jiang X, Lan Z. Computational and experimental study on the cation distribution of La-Cu substituted barium hexaferrites Journal of Alloys and Compounds. 664: 406-410. DOI: 10.1016/j.jallcom.2015.12.251  0.32
2016 Li H, Qiu H, Yu Z, Zhang Y. Infrared and visible image fusion scheme based on NSCT and low-level visual features Infrared Physics and Technology. 76: 174-184. DOI: 10.1016/j.infrared.2016.02.005  0.32
2016 Zhang Y, Li J, Xiao S, Xiang Z, Wang Z, Yan X, Yu Z. Artificial interspecific backcrosses between the hybrid of female Crassostrea hongkongensis×male C. gigas and the two parental species Aquaculture. 450: 95-101. DOI: 10.1016/j.aquaculture.2015.07.013  0.32
2016 Li Y, Jin Y, Li J, Li H, Yu Z. Effects of thermal pretreatment on the biomethane yield and hydrolysis rate of kitchen waste Applied Energy. 172: 47-58. DOI: 10.1016/j.apenergy.2016.03.080  0.36
2016 Duan M, Liu Y, Yu Z, Li L, Wang C, Axmacher JC. Environmental factors acting at multiple scales determine assemblages of insects and plants in agricultural mountain landscapes of northern China Agriculture, Ecosystems and Environment. 224: 86-94. DOI: 10.1016/j.agee.2016.03.025  0.32
2016 Ma G, Gao J, Yu Z, Chen X, Huang Q, Liu Y. Development of a Socially Interactive System with Whole-Body Movements for BHR-4 International Journal of Social Robotics. 8: 183-192. DOI: 10.1007/s12369-015-0330-y  0.32
2016 Kuang T, Liu Y, Gong T, Peng X, Hu X, Yu Z. Enzyme-responsive nanoparticles for anticancer drug delivery Current Nanoscience. 12: 38-46.  0.32
2015 Li J, Zhang Y, Liu Y, Zhang Y, Xiang Z, Qu F, Yu Z. A thymosin beta-4 is involved in production of hemocytes and immune defense of Hong Kong oyster, Crassostrea hongkongensis. Developmental and Comparative Immunology. PMID 26695126 DOI: 10.1016/j.dci.2015.12.007  0.32
2015 Ma C, Li J, Bao Z, Ruan Q, Yu Z. Serum Levels of ApoA1 and ApoA2 Are Associated with Cognitive Status in Older Men. Biomed Research International. 2015: 481621. PMID 26682220 DOI: 10.1155/2015/481621  0.32
2015 Li J, Zhang Y, Liu Y, Zhang Y, Xiao S, Yu Z. Co-expression of heat shock protein (HSP) 40 and HSP70 in Pinctada martensii response to thermal, low salinity and bacterial challenges. Fish & Shellfish Immunology. PMID 26679110 DOI: 10.1016/j.fsi.2015.11.038  0.32
2015 Dang S, Yu ZM, Zhang CY, Zheng J, Li KL, Wu Y, Qian LL, Yang ZY, Li XR, Zhang Y, Wang RX. Autophagy promotes apoptosis of mesenchymal stem cells under inflammatory microenvironment. Stem Cell Research & Therapy. 6: 247. PMID 26670667 DOI: 10.1186/s13287-015-0245-4  0.32
2015 Zhou Q, Wang H, Schwartz DM, Stoffels M, Park YH, Zhang Y, Yang D, Demirkaya E, Takeuchi M, Tsai WL, Layons JJ, Yu X, Ouyang C, Chen C, Chin DT, ... Yu Z, et al. Loss-of-function mutations in TNFAIP3 leading to A20 haploinsufficiency cause an early-onset autoinflammatory disease. Nature Genetics. PMID 26642243 DOI: 10.1038/ng.3459  0.32
2015 Chen B, Leng S, Yu L, Yu Z, Ma C, McCollough C. Lesion insertion in the projection domain: Methods and initial results. Medical Physics. 42: 7034. PMID 26632058 DOI: 10.1118/1.4935530  0.32
2015 Qin J, Yu Z, Guan H, Shi L, Liu Y, Zhao N, Shan Z, Han C, Li Y, Teng W. High Thyroglobulin Antibody Levels Increase the Risk of Differentiated Thyroid Carcinoma. Disease Markers. 2015: 648670. PMID 26600670 DOI: 10.1155/2015/648670  0.32
2015 Yu Z, Zhang Y, Gao N, Yong K. Suppression of Development of Ankylosing Spondylitis Through Soluble Flt-1. Cellular Physiology and Biochemistry : International Journal of Experimental Cellular Physiology, Biochemistry, and Pharmacology. 37: 2135-2142. PMID 26600037 DOI: 10.1159/000438571  0.32
2015 Wang G, Liu C, Deng S, Zhao Q, Li T, Qiao S, Shen L, Zhang Y, Lü J, Meng L, Liang C, Yu Z. Long noncoding RNAs in regulation of human breast cancer. Briefings in Functional Genomics. PMID 26582840 DOI: 10.1093/bfgp/elv049  0.32
2015 Han C, Li J, Lin X, Yu Z, Zhu X, Xu W, Li W. A new technique for immediate endoscopic realignment of post-traumatic bulbar urethral rupture. International Journal of Clinical and Experimental Medicine. 8: 13653-6. PMID 26550310  0.36
2015 Gao G, Yu Z, Yan J, Li J, Shen S, Jia B, Guan K, Gao X, Kan Q. Lowering blood ammonia prevents hepatocyte injury and apoptosis. International Journal of Clinical and Experimental Medicine. 8: 12347-55. PMID 26550144  0.36
2015 Wang F, Xiao S, Zhang Y, Zhang Y, Liu Y, Yan Y, Xiang Z, Yu Z. ChAkt1 involvement in orchestrating the immune and heat shock responses in Crassostrea hongkongensis: Molecular cloning and functional characterization. Fish & Shellfish Immunology. PMID 26549179 DOI: 10.1016/j.fsi.2015.11.009  0.32
2015 Wang J, Jiang Z, Lam W, Gullen EA, Yu Z, Wei Y, Wang L, Zeiss C, Beck A, Cheng EC, Wu C, Cheng YC, Zhang Y. Study of Malformin C, a Fungal Source Cyclic Pentapeptide, as an Anti-Cancer Drug. Plos One. 10: e0140069. PMID 26540166 DOI: 10.1371/journal.pone.0140069  0.32
2015 Lv Y, Wang N, Liu Y, Li X, Fan L, Li M, Wang L, Yu Z, Yan Q, Guo Y, Guo S, Wei L, Shi M, Wang Z. Tumor invasion depth is a useful pathologic assessment for predicting outcomes in cervical squamous cell carcinoma after neoadjuvant radiotherapy. Diagnostic Pathology. 10: 200. PMID 26537362 DOI: 10.1186/s13000-015-0426-6  0.32
2015 Guo L, Chen CH, Zhang LL, Cao XJ, Ma QL, Deng P, Zhu G, Gao CY, Li BH, Pi Y, Liu Y, Hu ZC, Zhang L, Yu ZP, Zhou Z, et al. IRAK1 mediates TLR4-induced ABCA1 downregulation and lipid accumulation in VSMCs. Cell Death & Disease. 6: e1949. PMID 26512959 DOI: 10.1038/cddis.2015.212  0.32
2015 Wang J, Wang S, Song Y, Liu X, Jin J, Wang W, Yu Z, Liu Y, Li Y. Postoperative intensity-modulated radiation therapy provides favorable local control and low toxicities in patients with soft tissue sarcomas in the extremities and trunk wall. Oncotargets and Therapy. 8: 2843-7. PMID 26491357 DOI: 10.2147/OTT.S88227  0.32
2015 Yu Z, Zhu K, Wang L, Liu Y, Sun J. Association of Neonatal Hyperbilirubinemia with UGT1A1 Gene Polymorphisms: A Meta-Analysis. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 21: 3104-14. PMID 26467199  0.32
2015 Li W, Tan C, Liu Y, Liu X, Wang X, Gui Y, Qin L, Deng F, Yu Z, Hu C, Chen L. Resveratrol ameliorates oxidative stress and inhibits aquaporin 4 expression following rat cerebral ischemia-reperfusion injury. Molecular Medicine Reports. PMID 26458999 DOI: 10.3892/mmr.2015.4366  0.36
2015 Yu Z, Fan L, Li J, Ge Z, Dang X, Wang K. Lithium prevents rat steroid-related osteonecrosis of the femoral head by β-catenin activation. Endocrine. PMID 26458922 DOI: 10.1007/s12020-015-0747-y  0.36
2015 Lai SS, Zhao DD, Cao P, Lu K, Luo OY, Chen WB, Liu J, Jiang EZ, Yu ZH, Lee G, Li J, Yu DC, Xu XJ, Zhu MS, Gao X, et al. PP2Acα Positively Regulates Mice Liver Regeneration Termination through AKT/GSK3β/Cyclin D1 Pathway. Journal of Hepatology. PMID 26456844 DOI: 10.1016/j.jhep.2015.09.025  0.36
2015 Luo Y, Yang J, Li J, Yu Z, Zhang G, Shi X, Shen M. Facile synthesis and functionalization of manganese oxide nanoparticles for targeted T1-weighted tumor MR imaging. Colloids and Surfaces. B, Biointerfaces. 136: 506-513. PMID 26454057 DOI: 10.1016/j.colsurfb.2015.09.053  0.36
2015 Hu L, Zeng G, Chen G, Dong H, Liu Y, Wan J, Chen A, Guo Z, Yan M, Wu H, Yu Z. Treatment of landfill leachate using immobilized Phanerochaete chrysosporium loaded with nitrogen-doped TiO2 nanoparticles. Journal of Hazardous Materials. 301: 106-118. PMID 26355412 DOI: 10.1016/j.jhazmat.2015.08.060  0.32
2015 Liu C, Qian P, Yang L, Zhang L, Chen C, He M, Lu Y, Feng W, Li M, Zhang Y, Zhong M, Yu Z, Zhou Z. Pubertal exposure to di-(2-ethylhexyl)-phthalate inhibits G9a-mediated histone methylation during spermatogenesis in mice. Archives of Toxicology. PMID 25975992 DOI: 10.1007/s00204-015-1529-2  0.32
2006 Yu Z, Jacobson MP, Friesner RA. What role do surfaces play in GB models? A new-generation of surface-generalized born model based on a novel gaussian surface for biomolecules. Journal of Computational Chemistry. 27: 72-89. PMID 16261581 DOI: 10.1002/jcc.20307  0.64
2004 Yu Z, Jacobson MP, Josovitz J, Rapp CS, Friesner RA. First-shell solvation of ion pairs: Correction of systematic errors in implicit solvent models Journal of Physical Chemistry B. 108: 6643-6654.  0.64
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