Byungchan Kim, Ph.D. - Publications

Affiliations: 
2005 Columbia University, New York, NY 
Area:
Computational Chemistry

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Wang L, Deng Y, Wu Y, Kim B, LeBard DN, Wandschneider D, Beachy M, Friesner RA, Abel R. Accurate Modeling of Scaffold Hopping Transformations in Drug Discovery. Journal of Chemical Theory and Computation. PMID 27933808 DOI: 10.1021/acs.jctc.6b00991  0.56
2016 Kim G, Kim J, Lee H, Cho S, Lyo I, Noh S, Kim BW, Kim SW, Lee KH, Lee W. Co-doping of Al and Bi to control the transport properties for improving thermoelectric performance of Mg2Si Scripta Materialia. 116: 11-15. DOI: 10.1016/j.scriptamat.2016.01.027  0.32
2016 Park HG, Deng Y, Lee KS, Kim BY, Yoon HJ, Lee KY, Jin BR. Molecular cloning and antifungal activity of an inhibitor cysteine knot peptide from the bumblebee Bombus ignitus Journal of Asia-Pacific Entomology. 19: 59-64. DOI: 10.1016/j.aspen.2015.10.012  0.52
2015 Wang L, Yuan L, Zeng X, Peng J, Ni Y, Er JC, Xu W, Agrawalla BK, Su D, Kim B, Chang YT. Multisite-Binding Switchable Fluorescent Probe for Monitoring Mitochondrial ATP Level Fluctuation in Live Cells. Angewandte Chemie (International Ed. in English). PMID 26676712 DOI: 10.1002/anie.201510003  0.52
2015 Feng X, Zhu W, Schurig-Briccio LA, Lindert S, Shoen C, Hitchings R, Li J, Wang Y, Baig N, Zhou T, Kim BK, Crick DC, Cynamon M, McCammon JA, Gennis RB, et al. Antiinfectives targeting enzymes and the proton motive force. Proceedings of the National Academy of Sciences of the United States of America. 112: E7073-82. PMID 26644565 DOI: 10.1073/pnas.1521988112  0.32
2015 Li J, Feng X, Zhu W, Oskolkov N, Zhou T, Kim BK, Baig N, McMahon MT, Oldfield E. Chemical Exchange Saturation Transfer (CEST) Agents: Quantum Chemistry and MRI. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 26616530 DOI: 10.1002/chem.201503942  0.32
2015 Kim BM, Hong Y, Lee S, Liu P, Lim JH, Lee YH, Lee TH, Chang KT, Hong Y. Therapeutic Implications for Overcoming Radiation Resistance in Cancer Therapy. International Journal of Molecular Sciences. 16: 26880-26913. PMID 26569225 DOI: 10.3390/ijms161125991  0.48
2015 Lee SW, Chang JH, Ji JS, Maeong IH, Cheung DY, Kim JS, Cho YS, Chung WJ, Lee BI, Kim SW, Kim BW, Choi H, Choi MG. Effect of Dynamic Position Changes on Adenoma Detection During Colonoscope Withdrawal: A Randomized Controlled Multicenter Trial. The American Journal of Gastroenterology. PMID 26526085 DOI: 10.1038/ajg.2015.354  0.32
2015 An YJ, Kim BH, Yun GH, Kim SW, Hong SB, Yook JG. Flexible Non-Constrained RF Wrist Pulse Detection Sensor Based on Array Resonators. Ieee Transactions On Biomedical Circuits and Systems. PMID 25966481 DOI: 10.1109/TBCAS.2015.2406776  0.32
2015 Wang L, Wu Y, Deng Y, Kim B, Pierce L, Krilov G, Lupyan D, Robinson S, Dahlgren MK, Greenwood J, Romero DL, Masse C, Knight JL, Steinbrecher T, Beuming T, et al. Accurate and reliable prediction of relative ligand binding potency in prospective drug discovery by way of a modern free-energy calculation protocol and force field. Journal of the American Chemical Society. 137: 2695-703. PMID 25625324 DOI: 10.1021/ja512751q  0.56
2015 Goldfeld DA, Murphy R, Kim B, Wang L, Beuming T, Abel R, Friesner RA. Docking and free energy perturbation studies of ligand binding in the kappa opioid receptor. The Journal of Physical Chemistry. B. 119: 824-35. PMID 25395044 DOI: 10.1021/jp5053612  0.56
2013 Wang L, Deng Y, Knight JL, Wu Y, Kim B, Sherman W, Shelley JC, Lin T, Abel R. Modeling Local Structural Rearrangements Using FEP/REST: Application to Relative Binding Affinity Predictions of CDK2 Inhibitors. Journal of Chemical Theory and Computation. 9: 1282-93. PMID 26588769 DOI: 10.1021/ct300911a  0.56
2012 Beuming T, Che Y, Abel R, Kim B, Shanmugasundaram V, Sherman W. Thermodynamic analysis of water molecules at the surface of proteins and applications to binding site prediction and characterization. Proteins. 80: 871-83. PMID 22223256 DOI: 10.1002/prot.23244  0.56
2009 Lyman E, Higgs C, Kim B, Lupyan D, Shelley JC, Farid R, Voth GA. A role for a specific cholesterol interaction in stabilizing the Apo configuration of the human A(2A) adenosine receptor. Structure (London, England : 1993). 17: 1660-8. PMID 20004169 DOI: 10.1016/j.str.2009.10.010  0.56
2008 Trbovic N, Kim B, Friesner RA, Palmer AG. Structural analysis of protein dynamics by MD simulations and NMR spin-relaxation. Proteins. 71: 684-94. PMID 17975832 DOI: 10.1002/prot.21750  0.56
2007 Huang X, Hagen M, Kim B, Friesner RA, Zhou R, Berne BJ. Replica exchange with solute tempering: efficiency in large scale systems. The Journal of Physical Chemistry. B. 111: 5405-10. PMID 17439169 DOI: 10.1021/jp068826w  0.56
2007 Hagen M, Kim B, Liu P, Friesner RA, Berne BJ. Serial replica exchange. The Journal of Physical Chemistry. B. 111: 1416-23. PMID 17249714 DOI: 10.1021/jp064479e  0.56
2007 Young T, Abel R, Kim B, Berne BJ, Friesner RA. Motifs for molecular recognition exploiting hydrophobic enclosure in protein-ligand binding. Proceedings of the National Academy of Sciences of the United States of America. 104: 808-13. PMID 17204562 DOI: 10.1073/pnas.0610202104  0.56
2005 Harder E, Kim B, Friesner RA, Berne BJ. Efficient Simulation Method for Polarizable Protein Force Fields:  Application to the Simulation of BPTI in Liquid Water. Journal of Chemical Theory and Computation. 1: 169-80. PMID 26641127 DOI: 10.1021/ct049914s  0.56
2005 Kim B, Young T, Harder E, Friesner RA, Berne BJ. Structure and dynamics of the solvation of bovine pancreatic trypsin inhibitor in explicit water: a comparative study of the effects of solvent and protein polarizability. The Journal of Physical Chemistry. B. 109: 16529-38. PMID 16853101 DOI: 10.1021/jp051569v  0.56
2005 Liu P, Kim B, Friesner RA, Berne BJ. Replica exchange with solute tempering: a method for sampling biological systems in explicit water. Proceedings of the National Academy of Sciences of the United States of America. 102: 13749-54. PMID 16172406 DOI: 10.1073/pnas.0506346102  0.56
2005 Harder E, Kim B, Friesner RA, Berne BJ. Efficient simulation method for polarizable protein force fields: Application to the simulation of BPTI in liquid water Journal of Chemical Theory and Computation. 1: 169-180. DOI: 10.1021/ct049914s  0.56
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