| Year |
Citation |
Score |
| 2024 |
Hochstoeger T, Papasaikas P, Piskadlo E, Chao JA. Distinct roles of LARP1 and 4EBP1/2 in regulating translation and stability of 5'TOP mRNAs. Science Advances. 10: eadi7830. PMID 38363833 DOI: 10.1126/sciadv.adi7830 |
0.427 |
|
| 2024 |
Ngo LH, Bert AG, Dredge BK, Williams T, Murphy V, Li W, Hamilton WB, Carey KT, Toubia J, Pillman KA, Liu D, Desogus J, Chao JA, Deans AJ, Goodall GJ, et al. Nuclear export of circular RNA. Nature. PMID 38355801 DOI: 10.1038/s41586-024-07060-5 |
0.51 |
|
| 2023 |
Eichenberger BT, Griesbach E, Mitchell J, Chao JA. Following the Birth, Life, and Death of mRNAs in Single Cells. Annual Review of Cell and Developmental Biology. 39: 253-275. PMID 37843928 DOI: 10.1146/annurev-cellbio-022723-024045 |
0.435 |
|
| 2023 |
Hochstoeger T, Chao JA. Towards a molecular understanding of the 5'TOP motif in regulating translation of ribosomal mRNAs. Seminars in Cell & Developmental Biology. PMID 37316417 DOI: 10.1016/j.semcdb.2023.06.001 |
0.365 |
|
| 2023 |
Dave P, Roth G, Griesbach E, Mateju D, Hochstoeger T, Chao JA. Single-molecule imaging reveals translation-dependent destabilization of mRNAs. Molecular Cell. PMID 36731471 DOI: 10.1016/j.molcel.2023.01.013 |
0.389 |
|
| 2022 |
Piskadlo E, Eichenberger BT, Giorgetti L, Chao JA. Design, Labeling, and Application of Probes for RNA smFISH. Methods in Molecular Biology (Clifton, N.J.). 2537: 173-183. PMID 35895264 DOI: 10.1007/978-1-0716-2521-7_10 |
0.397 |
|
| 2022 |
Gómez-Puerta S, Ferrero R, Hochstoeger T, Zubiri I, Chao J, Aragón T, Voigt F. Live imaging of the co-translational recruitment of XBP1 mRNA to the ER and its processing by diffuse, non-polarized IRE1α. Elife. 11. PMID 35730412 DOI: 10.7554/eLife.75580 |
0.321 |
|
| 2022 |
Zinnall U, Milek M, Minia I, Vieira-Vieira CH, Müller S, Mastrobuoni G, Hazapis OG, Del Giudice S, Schwefel D, Bley N, Voigt F, Chao JA, Kempa S, Hüttelmaier S, Selbach M, et al. HDLBP binds ER-targeted mRNAs by multivalent interactions to promote protein synthesis of transmembrane and secreted proteins. Nature Communications. 13: 2727. PMID 35585045 DOI: 10.1038/s41467-022-30322-7 |
0.395 |
|
| 2021 |
Duchon A, Santos S, Chen J, Brown M, Nikolaitchik OA, Tai S, Chao JA, Freed EO, Pathak VK, Hu WS. Plasma Membrane Anchoring and Gag:Gag Multimerization on Viral RNA Are Critical Properties of HIV-1 Gag Required To Mediate Efficient Genome Packaging. Mbio. e0325421. PMID 34872357 DOI: 10.1128/mbio.03254-21 |
0.414 |
|
| 2021 |
Mitchell J, Chao JA. Single-molecule mRNA and translation imaging in neurons. Biochemical Society Transactions. PMID 34495323 DOI: 10.1042/BST20210313 |
0.337 |
|
| 2020 |
Mateju D, Eichenberger B, Voigt F, Eglinger J, Roth G, Chao JA. Single-Molecule Imaging Reveals Translation of mRNAs Localized to Stress Granules. Cell. PMID 33308477 DOI: 10.1016/j.cell.2020.11.010 |
0.451 |
|
| 2020 |
Bhaskar V, Jia M, Chao JA. A Single-Molecule RNA Mobility Assay to Identify Proteins that Link RNAs to Molecular Motors. Methods in Molecular Biology (Clifton, N.J.). 2166: 269-282. PMID 32710415 DOI: 10.1007/978-1-0716-0712-1_16 |
0.545 |
|
| 2020 |
Dave P, Chao JA. Insights into mRNA degradation from single-molecule imaging in living cells. Current Opinion in Structural Biology. 65: 89-95. PMID 32659634 DOI: 10.1016/J.Sbi.2020.06.003 |
0.53 |
|
| 2020 |
Bhaskar V, Graff-Meyer A, Schenk AD, Cavadini S, von Loeffelholz O, Natchiar SK, Artus-Revel CG, Hotz HR, Bretones G, Klaholz BP, Chao JA. Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Reports. 31: 107473. PMID 32268098 DOI: 10.1016/J.Celrep.2020.03.037 |
0.399 |
|
| 2019 |
Ross NT, Lohmann F, Carbonneau S, Fazal A, Weihofen WA, Gleim S, Salcius M, Sigoillot F, Henault M, Carl SH, Rodríguez-Molina JB, Miller HR, Brittain SM, Murphy J, Zambrowski M, ... ... Chao JA, et al. CPSF3-dependent pre-mRNA processing as a druggable node in AML and Ewing's sarcoma. Nature Chemical Biology. PMID 31819276 DOI: 10.1038/S41589-019-0424-1 |
0.449 |
|
| 2019 |
Biswas J, Patel VL, Bhaskar V, Chao JA, Singer RH, Eliscovich C. The structural basis for RNA selectivity by the IMP family of RNA-binding proteins. Nature Communications. 10: 4440. PMID 31570709 DOI: 10.1038/S41467-019-12193-7 |
0.582 |
|
| 2019 |
Voigt F, Eglinger J, Chao JA. Quantification of mRNA Turnover in Living Cells: A Pipeline for TREAT Data Analysis. Methods in Molecular Biology (Clifton, N.J.). 2038: 75-88. PMID 31407279 DOI: 10.1007/978-1-4939-9674-2_6 |
0.564 |
|
| 2019 |
Voigt F, Gerbracht JV, Boehm V, Horvathova I, Eglinger J, Chao JA, Gehring NH. Detection and quantification of RNA decay intermediates using XRN1-resistant reporter transcripts. Nature Protocols. PMID 31019309 DOI: 10.1038/S41596-019-0152-8 |
0.594 |
|
| 2019 |
Wilbertz JH, Voigt F, Horvathova I, Roth G, Zhan Y, Chao JA. Single-Molecule Imaging of mRNA Localization and Regulation during the Integrated Stress Response. Molecular Cell. PMID 30661979 DOI: 10.1016/J.Molcel.2018.12.006 |
0.491 |
|
| 2018 |
Chao JA, Lionnet T. Imaging the Life and Death of mRNAs in Single Cells. Cold Spring Harbor Perspectives in Biology. 10. PMID 30510061 DOI: 10.1101/Cshperspect.A032086 |
0.6 |
|
| 2018 |
Jia M, Gut H, Chao JA. Structural basis of IMP3 RRM12 recognition of RNA. Rna (New York, N.Y.). PMID 30135093 DOI: 10.2210/Pdb6Fqr/Pdb |
0.6 |
|
| 2018 |
Voigt F, Eglinger J, Chao JA. Detection of the First Round of Translation: The TRICK Assay. Methods in Molecular Biology (Clifton, N.J.). 1649: 373-384. PMID 29130211 DOI: 10.1007/978-1-4939-7213-5_25 |
0.614 |
|
| 2017 |
Voigt F, Zhang H, Cui XA, Triebold D, Liu AX, Eglinger J, Lee ES, Chao JA, Palazzo AF. Single-Molecule Quantification of Translation-Dependent Association of mRNAs with the Endoplasmic Reticulum. Cell Reports. 21: 3740-3753. PMID 29281824 DOI: 10.1016/J.Celrep.2017.12.008 |
0.515 |
|
| 2017 |
Horvathova I, Voigt F, Kotrys AV, Zhan Y, Artus-Revel CG, Eglinger J, Stadler MB, Giorgetti L, Chao JA. The Dynamics of mRNA Turnover Revealed by Single-Molecule Imaging in Single Cells. Molecular Cell. PMID 29056324 DOI: 10.1016/J.Molcel.2017.09.030 |
0.619 |
|
| 2016 |
Halstead JM, Wilbertz JH, Wippich F, Lionnet T, Ephrussi A, Chao JA. TRICK: A Single-Molecule Method for Imaging the First Round of Translation in Living Cells and Animals. Methods in Enzymology. 572: 123-57. PMID 27241753 DOI: 10.1016/Bs.Mie.2016.02.027 |
0.611 |
|
| 2015 |
Halstead JM, Lionnet T, Wilbertz JH, Wippich F, Ephrussi A, Singer RH, Chao JA. Translation. An RNA biosensor for imaging the first round of translation from single cells to living animals. Science (New York, N.Y.). 347: 1367-671. PMID 25792328 DOI: 10.1126/Science.Aaa3380 |
0.579 |
|
| 2015 |
Campbell PD, Chao JA, Singer RH, Marlow FL. Dynamic visualization of transcription and RNA subcellular localization in zebrafish. Development (Cambridge, England). 142: 1368-74. PMID 25758462 DOI: 10.1242/Dev.118968 |
0.584 |
|
| 2013 |
Hocine S, Raymond P, Zenklusen D, Chao JA, Singer RH. Single-molecule analysis of gene expression using two-color RNA labeling in live yeast. Nature Methods. 10: 119-21. PMID 23263691 DOI: 10.1038/Nmeth.2305 |
0.59 |
|
| 2012 |
Chao JA, Yoon YJ, Singer RH. Imaging translation in single cells using fluorescent microscopy. Cold Spring Harbor Perspectives in Biology. 4. PMID 22960595 DOI: 10.1101/Cshperspect.A012310 |
0.458 |
|
| 2012 |
Park HY, Trcek T, Wells AL, Chao JA, Singer RH. An unbiased analysis method to quantify mRNA localization reveals its correlation with cell motility. Cell Reports. 1: 179-84. PMID 22832165 DOI: 10.1016/J.Celrep.2011.12.009 |
0.448 |
|
| 2012 |
Wu B, Chao JA, Singer RH. Fluorescence fluctuation spectroscopy enables quantitative imaging of single mRNAs in living cells. Biophysical Journal. 102: 2936-44. PMID 22735544 DOI: 10.1016/J.Bpj.2012.05.017 |
0.577 |
|
| 2012 |
Trcek T, Chao JA, Larson DR, Park HY, Zenklusen D, Shenoy SM, Singer RH. Single-mRNA counting using fluorescent in situ hybridization in budding yeast. Nature Protocols. 7: 408-19. PMID 22301778 DOI: 10.1038/Nprot.2011.451 |
0.456 |
|
| 2012 |
Patel VL, Mitra S, Harris R, Buxbaum AR, Lionnet T, Brenowitz M, Girvin M, Levy M, Almo SC, Singer RH, Chao JA. Spatial arrangement of an RNA zipcode identifies mRNAs under post-transcriptional control. Genes & Development. 26: 43-53. PMID 22215810 DOI: 10.1101/Gad.177428.111 |
0.571 |
|
| 2012 |
Patel V, Chao J, Singer R, Guha C. IMP1 Consensus Recognition Elements Identify Transcripts Affecting Tumor Cell Survival After Ionizing Radiation International Journal of Radiation Oncology*Biology*Physics. 84: S672-S673. DOI: 10.1016/J.Ijrobp.2012.07.1797 |
0.509 |
|
| 2011 |
Larson DR, Zenklusen D, Wu B, Chao JA, Singer RH. Real-time observation of transcription initiation and elongation on an endogenous yeast gene. Science (New York, N.Y.). 332: 475-8. PMID 21512033 DOI: 10.1126/Science.1202142 |
0.513 |
|
| 2011 |
Lionnet T, Czaplinski K, Darzacq X, Shav-Tal Y, Wells AL, Chao JA, Park HY, de Turris V, Lopez-Jones M, Singer RH. A transgenic mouse for in vivo detection of endogenous labeled mRNA. Nature Methods. 8: 165-70. PMID 21240280 DOI: 10.1038/Nmeth.1551 |
0.465 |
|
| 2010 |
Chao JA, Patskovsky Y, Patel V, Levy M, Almo SC, Singer RH. ZBP1 recognition of beta-actin zipcode induces RNA looping. Genes & Development. 24: 148-58. PMID 20080952 DOI: 10.1101/Gad.1862910 |
0.608 |
|
| 2009 |
Singer RH, Shav-Tal Y, Darzacq X, de Turris V, Chao J, Gruenwald D, Lionnet T, Shenoy S. Using fluorescent proteins to analyze gene expression in real-time Biophysical Journal. 96: 205a. DOI: 10.1016/J.Bpj.2008.12.1832 |
0.611 |
|
| 2008 |
Chao JA, Patskovsky Y, Almo SC, Singer RH. Structural basis for the coevolution of a viral RNA-protein complex. Nature Structural & Molecular Biology. 15: 103-5. PMID 18066080 DOI: 10.1038/Nsmb1327 |
0.558 |
|
| 2008 |
Chao JA, Czaplinski K, Singer RH. Using the Bacteriophage MS2 Coat Protein-RNA Binding Interaction to Visualize RNA in Living Cells Probes and Tags to Study Biomolecular Function: For Proteins, Rna, and Membranes. 163-174. DOI: 10.1002/9783527623099.ch9 |
0.456 |
|
| 2005 |
Chao JA, Lee JH, Chapados BR, Debler EW, Schneemann A, Williamson JR. Dual modes of RNA-silencing suppression by Flock House virus protein B2. Nature Structural & Molecular Biology. 12: 952-7. PMID 16228003 DOI: 10.1038/Nsmb1005 |
0.627 |
|
| 2004 |
Chao JA, Williamson JR. Joint X-ray and NMR refinement of the yeast L30e-mRNA complex. Structure (London, England : 1993). 12: 1165-76. PMID 15242593 DOI: 10.1016/J.Str.2004.04.023 |
0.646 |
|
| 2003 |
Hoggan DB, Chao JA, Prasad GS, Stout CD, Williamson JR. Combinatorial crystallization of an RNA-protein complex. Acta Crystallographica. Section D, Biological Crystallography. 59: 466-73. PMID 12595703 DOI: 10.1107/S0907444902023399 |
0.625 |
|
| 2003 |
Chao JA, Prasad GS, White SA, Stout CD, Williamson JR. Inherent protein structural flexibility at the RNA-binding interface of L30e. Journal of Molecular Biology. 326: 999-1004. PMID 12589748 DOI: 10.1016/S0022-2836(02)01476-6 |
0.642 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2020 |
Ross NT, Lohmann F, Carbonneau S, Fazal A, Weihofen WA, Gleim S, Salcius M, Sigoillot F, Henault M, Carl SH, Rodríguez-Molina JB, Miller HR, Brittain SM, Murphy J, Zambrowski M, ... ... Chao JA, et al. Author Correction: CPSF3-dependent pre-mRNA processing as a druggable node in AML and Ewing's sarcoma. Nature Chemical Biology. PMID 32139909 DOI: 10.1038/S41589-020-0508-Y |
0.296 |
|
| 2021 |
Bhaskar V, Desogus J, Graff-Meyer A, Schenk AD, Cavadini S, Chao JA. Dynamic association of human Ebp1 with the ribosome. Rna (New York, N.Y.). PMID 33479117 DOI: 10.1261/rna.077602.120 |
0.293 |
|
| 2021 |
Mateju D, Chao JA. Stress granules: Regulators or by-products? The Febs Journal. PMID 33725420 DOI: 10.1111/febs.15821 |
0.253 |
|
| 2021 |
Nörpel J, Cavadini S, Schenk AD, Graff-Meyer A, Hess D, Seebacher J, Chao JA, Bhaskar V. Structure of the human C9orf72-SMCR8 complex reveals a multivalent protein interaction architecture. Plos Biology. 19: e3001344. PMID 34297726 DOI: 10.1371/journal.pbio.3001344 |
0.251 |
|
| 2023 |
Vatandaslar H, Garzia A, Meyer C, Godbersen S, Brandt LTL, Griesbach E, Chao JA, Tuschl T, Stoffel M. In vivo PAR-CLIP (viP-CLIP) of liver TIAL1 unveils targets regulating cholesterol synthesis and secretion. Nature Communications. 14: 3386. PMID 37296170 DOI: 10.1038/s41467-023-39135-8 |
0.237 |
|
| 2018 |
Wilbertz JH, Chao JA. Caught in the Act? Quantifying Biochemistry Inside and Outside of Biomolecular Condensates. Biochemistry. PMID 30240191 DOI: 10.1021/Acs.Biochem.8B00905 |
0.233 |
|
| 2021 |
Eichenberger BT, Zhan Y, Rempfler M, Giorgetti L, Chao JA. deepBlink: threshold-independent detection and localization of diffraction-limited spots. Nucleic Acids Research. PMID 34197605 DOI: 10.1093/nar/gkab546 |
0.149 |
|
| 2022 |
Yao ZC, Yang YH, Kong J, Zhu Y, Li L, Chang C, Zhang C, Yin J, Chao J, Selaru FM, Reddy SK, Mao HQ. Biostimulatory Micro-Fragmented Nanofiber-Hydrogel Composite Improves Mesenchymal Stem Cell Delivery and Soft Tissue Remodeling. Small (Weinheim An Der Bergstrasse, Germany). e2202309. PMID 35948487 DOI: 10.1002/smll.202202309 |
0.089 |
|
| 2001 |
Blackwell HE, Sadowsky JD, Howard RJ, Sampson JN, Chao JA, Steinmetz WE, O'Leary DJ, Grubbs RH. Ring-closing metathesis of olefinic peptides: design, synthesis, and structural characterization of macrocyclic helical peptides. The Journal of Organic Chemistry. 66: 5291-302. PMID 11485448 DOI: 10.1021/Jo015533K |
0.086 |
|
| 2023 |
Li L, Yao ZC, Parian A, Yang YH, Chao J, Yin J, Salimian KJ, Reddy SK, Zaheer A, Gearhart SL, Mao HQ, Selaru FM. A nanofiber-hydrogel composite improves tissue repair in a rat model of Crohn's disease perianal fistulas. Science Advances. 9: eade1067. PMID 36598982 DOI: 10.1126/sciadv.ade1067 |
0.055 |
|
| 2008 |
Huang YC, Chao JA, Hsiang-Jung L. Study on a PZT actuator based on pre-stressed mechanism Ieee/Asme International Conference On Advanced Intelligent Mechatronics, Aim. 722-727. DOI: 10.1109/AIM.2008.4601749 |
0.054 |
|
| 2007 |
Lin JC, Wang WY, Liang WM, Chou HY, Jan JS, Jiang RS, Wang JY, Twu CW, Liang KL, Chao J, Shen WC. Long-term prognostic effects of plasma epstein-barr virus DNA by minor groove binder-probe real-time quantitative PCR on nasopharyngeal carcinoma patients receiving concurrent chemoradiotherapy. International Journal of Radiation Oncology, Biology, Physics. 68: 1342-8. PMID 17449194 DOI: 10.1016/j.ijrobp.2007.02.012 |
0.045 |
|
| 2010 |
Ma MY, Chao JA, Huang YC. Improved Particle Swarm Optimization approach of PID controller design for machine tool positioning 3ca 2010 - 2010 International Symposium On Computer, Communication, Control and Automation. 1: 450-453. DOI: 10.1109/3CA.2010.5533768 |
0.036 |
|
| 2009 |
Hsiao FS, Chao JA, Huang YC. 3D finite element analysis and experiment on the piezoelectric ultrasonic transducer motion 2009 Ieee International Conference On Mechatronics and Automation, Icma 2009. 158-163. DOI: 10.1109/ICMA.2009.5246089 |
0.032 |
|
| 2014 |
Su YW, Chao JA, Huang YC. Adaptive zero-phase filtering bandwidth of iterative learning control by particle swarm optimization Lecture Notes in Electrical Engineering. 293: 1031-1037. DOI: 10.1007/978-3-319-04573-3_126 |
0.026 |
|
| 2011 |
Li YH, Huang YC, Chao JA. Improved particle swarm optimization by updating constraints of PID control for real time linear motor positioning Lecture Notes in Electrical Engineering. 100: 515-523. DOI: 10.1007/978-3-642-21762-3_67 |
0.026 |
|
| 2010 |
Chang JL, Chao JA, Huang YC, Chen JS. Prognostic experiment for ball screw preload loss of machine tool through the Hilbert-Huang transform and multiscale entropy method 2010 Ieee International Conference On Information and Automation, Icia 2010. 376-380. DOI: 10.1109/ICINFA.2010.5512064 |
0.025 |
|
| 1979 |
Chao JA. Conjugate characterizations of H1 dyadic martingales Mathematische Annalen. 240: 63-67. DOI: 10.1007/BF01428300 |
0.021 |
|
| 2011 |
Shin YC, Huang YC, Chao JA. Diagnosis of ball screw preload loss by vibration signals through the Hilbert-Huang transform and multiscale measure Applied Mechanics and Materials. 58: 636-641. DOI: 10.4028/www.scientific.net/AMM.58-60.636 |
0.018 |
|
| 2010 |
Hanson M, Chao J, Lim RB. Chylous ascites mimicking peritonitis after laparoscopic Roux-en-Y gastric bypass for morbid obesity. Surgery For Obesity and Related Diseases : Official Journal of the American Society For Bariatric Surgery. 8: e1-2. PMID 20947450 DOI: 10.1016/j.soard.2010.07.014 |
0.01 |
|
| 2006 |
Twu CW, Wang WY, Liang WM, Jan JS, Jiang RS, Chao J, Jin YT, Lin JC. Comparison of the prognostic impact of serum anti-EBV antibody and plasma EBV DNA assays in nasopharyngeal carcinoma. International Journal of Radiation Oncology, Biology, Physics. 67: 130-7. PMID 16979842 DOI: 10.1016/J.IJROBP.2006.07.012 |
0.01 |
|
| 1992 |
Chao JA, Long RL. Martingale transforms and Hardy spaces Probability Theory and Related Fields. 91: 399-404. DOI: 10.1007/BF01192064 |
0.01 |
|
| Hide low-probability matches. |