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Ilya Chorny, Ph.D. - Publications

Affiliations: 
2003 University of California, Santa Cruz, Santa Cruz, CA, United States 
Area:
computational chemistry, molecular dynamics
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18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Sharma VK, Patapoff TW, Kabakoff B, Pai S, Hilario E, Zhang B, Li C, Borisov O, Kelley RF, Chorny I, Zhou JZ, Dill KA, Swartz TE. In silico selection of therapeutic antibodies for development: viscosity, clearance, and chemical stability. Proceedings of the National Academy of Sciences of the United States of America. 111: 18601-6. PMID 25512516 DOI: 10.1073/Pnas.1421779112  0.373
2013 Kortkhonjia E, Brandman R, Zhou JZ, Voelz VA, Chorny I, Kabakoff B, Patapoff TW, Dill KA, Swartz TE. Probing antibody internal dynamics with fluorescence anisotropy and molecular dynamics simulations. Mabs. 5: 306-22. PMID 23396076 DOI: 10.4161/Mabs.23651  0.431
2012 Butterfoss GL, Yoo B, Jaworski JN, Chorny I, Dill KA, Zuckermann RN, Bonneau R, Kirshenbaum K, Voelz VA. De novo structure prediction and experimental characterization of folded peptoid oligomers. Proceedings of the National Academy of Sciences of the United States of America. 109: 14320-5. PMID 22908242 DOI: 10.1073/Pnas.1209945109  0.341
2011 Voelz VA, Dill KA, Chorny I. Peptoid conformational free energy landscapes from implicit-solvent molecular simulations in AMBER. Biopolymers. 96: 639-50. PMID 21184487 DOI: 10.1002/Bip.21575  0.406
2010 Kortkhonjia E, Brandman R, Chorny I, Kissman J, Patapoff T, Kabakoff B, Dill K, Swartz T. Solution Dynamics of Monoclonal Antibodies: Experimental and Computational Approach Biophysical Journal. 98: 443a. DOI: 10.1016/J.Bpj.2009.12.2406  0.339
2009 Ho JD, Yeh R, Sandstrom A, Chorny I, Harries WE, Robbins RA, Miercke LJ, Stroud RM. Crystal structure of human aquaporin 4 at 1.8 A and its mechanism of conductance. Proceedings of the National Academy of Sciences of the United States of America. 106: 7437-42. PMID 19383790 DOI: 10.1073/Pnas.0902725106  0.367
2007 Mandell DJ, Chorny I, Groban ES, Wong SE, Levine E, Rapp CS, Jacobson MP. Strengths of hydrogen bonds involving phosphorylated amino acid side chains. Journal of the American Chemical Society. 129: 820-7. PMID 17243818 DOI: 10.1021/Ja063019W  0.301
2005 Chorny I, Benjamin I. Hydration shell exchange dynamics during ion transfer across the liquid/liquid interface. The Journal of Physical Chemistry. B. 109: 16455-62. PMID 16853092 DOI: 10.1021/Jp051836X  0.618
2005 Chorny I, Dill KA, Jacobson MP. Surfaces affect ion pairing. The Journal of Physical Chemistry. B. 109: 24056-60. PMID 16375397 DOI: 10.1021/Jp055043M  0.32
2004 Chorny I, Benjamin I, Nathanson GM. Scattering, trapping, and ionization of HCl at the surface of liquid glycerol Journal of Physical Chemistry B. 108: 995-1002. DOI: 10.1021/Jp035825K  0.637
2004 Chorny I, Benjamin I. Molecular dynamics study of the vibrational relaxation of OCl and OCl - in the bulk and the surface of water and acetonitrile Journal of Molecular Liquids. 110: 133-139. DOI: 10.1016/J.Molliq.2003.09.008  0.7
2003 Winter N, Chorny I, Vieceli J, Benjamin I. Molecular dynamics study of the photodissociation and photoisomerization of ICN in water Journal of Chemical Physics. 119: 2127-2143. DOI: 10.1063/1.1585019  0.758
2003 Chorny I, Vieceli J, Benjamin I. Photodissociation and vibrational relaxation of OClO at liquid surfaces Journal of Physical Chemistry B. 107: 229-236. DOI: 10.1021/Jp021796M  0.795
2002 Vieceli J, Chorny I, Benjamin I. Vibrational relaxation at water surfaces Journal of Chemical Physics. 117: 4532-4541. DOI: 10.1063/1.1497633  0.792
2002 Chorny I, Vieceli J, Benjamin I. Molecular dynamics study of the vibrational relaxation of OClO in bulk liquids Journal of Chemical Physics. 116: 8904-8911. DOI: 10.1063/1.1471558  0.791
2002 Chorny I, Vieceli J, Benjamin I. Molecular dynamics study of the photodissociation of OClO in bulk liquids Journal of Chemical Physics. 116: 8930-8937. DOI: 10.1063/1.1471557  0.788
2002 Vieceli J, Chorny I, Benjamin I. Vibrational relaxation of ICN bulk and surface chloroform Chemical Physics Letters. 364: 446-453. DOI: 10.1016/S0009-2614(02)01352-0  0.782
2001 Vieceli J, Chorny I, Benjamin I. Photodissociation of ICN at the liquid/vapor interface of chloroform Journal of Chemical Physics. 115: 4819-4828. DOI: 10.1063/1.1388196  0.752
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