Ao Ma, Ph.D. - Publications

Affiliations: 
2003 Brown University, Providence, RI 
Area:
theoretical understanding of dynamics in liquids

40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang B, Ma H, Khan T, Ma A, Li T, Zhang H, Gao J, Zhou J, Li Y, Yu C, Bao J, Ali A, Murtaza G, Yin H, Gao Q, et al. A missense variant causes flagella destabilization and asthenozoospermia. The Journal of Experimental Medicine. PMID 31658987 DOI: 10.1084/jem.20182365  0.44
2016 Li W, Ma A. A benchmark for reaction coordinates in the transition path ensemble. The Journal of Chemical Physics. 144: 134104. PMID 27059559 DOI: 10.1063/1.4945337  1
2016 Li W, Ma A. Reaction mechanism and reaction coordinates from the viewpoint of energy flow. The Journal of Chemical Physics. 144: 114103. PMID 27004858 DOI: 10.1063/1.4943581  1
2016 Huang L, Zhang B, Yuan X, Zhang C, Ma A. A novel Bi-Ant colony optimization algorithm for solving multi-objective service selection problem Proceedings - International Conference On Natural Computation. 2016: 1080-1084. DOI: 10.1109/ICNC.2015.7378142  0.44
2015 Li W, Ma A. Some studies on generalized coordinate sets for polyatomic molecules. The Journal of Chemical Physics. 143: 224103. PMID 26671354 DOI: 10.1063/1.4936773  1
2015 Guan X, Fan K, Gao T, Ma A, Zhang B, Song J. A novel multi-stimuli responsive gelator based on d-gluconic acetal and its potential applications. Chemical Communications (Cambridge, England). PMID 26587571 DOI: 10.1039/c5cc08615a  0.44
2015 Li W, Ma A. Reducing the cost of evaluating the committor by a fitting procedure. The Journal of Chemical Physics. 143: 174103. PMID 26547154 DOI: 10.1063/1.4934782  1
2015 Adekunle AE, Wang F, Hu J, Ma A, Guo C, Zhuang G, Liu CZ. Chitosan multiple addition enhances laccase production from Trametes versicolor. Bioprocess and Biosystems Engineering. 38: 1973-81. PMID 26178243 DOI: 10.1007/s00449-015-1438-z  0.6
2015 Wang Y, Wang Y, Lan R, Xu H, Ma A, Li D, Dai H, Yuan X, Xu J, Ye C. Multiple Endonuclease Restriction Real-Time Loop-Mediated Isothermal Amplification: A Novel Analytically Rapid, Sensitive, Multiplex Loop-Mediated Isothermal Amplification Detection Technique. The Journal of Molecular Diagnostics : Jmd. 17: 392-401. PMID 26094089 DOI: 10.1016/j.jmoldx.2015.03.002  0.44
2015 Huang L, Fan B, Ma A, Shaul PW, Zhu H. Inhibition of ABCA1 protein degradation promotes HDL cholesterol efflux capacity and RCT and reduces atherosclerosis in mice. Journal of Lipid Research. 56: 986-97. PMID 25761370 DOI: 10.1194/jlr.M054742  0.44
2015 Hao Q, Wang H, Zhang C, Ma AQ, Wu YZ. A successful cesarean section followed with endovascular stent-graft implantation for a 36-week twin pregnancy with acute aortic dissection: a case report. Irish Journal of Medical Science. PMID 25644698 DOI: 10.1007/s11845-015-1260-2  0.44
2015 Liu M, Liu X, Ma A, Zhang B, Jin M. Spatiotemporal Variability of Chlorophyll a and Sea Surface Temperature in the Northern South China Sea from 2002 to 2012 Canadian Journal of Remote Sensing. 1-14. DOI: 10.1080/07038992.2015.1112728  0.44
2015 Adekunle AE, Wang F, Hu J, Ma A, Guo C, Zhuang G, Liu CZ. Chitosan multiple addition enhances laccase production from Trametes versicolor Bioprocess and Biosystems Engineering. DOI: 10.1007/s00449-015-1438-z  0.6
2014 Li W, Ma A. Recent developments in methods for identifying reaction coordinates. Molecular Simulation. 40: 784-793. PMID 25197161 DOI: 10.1080/08927022.2014.907898  1
2013 Solinet S, Mahmud K, Stewman SF, Ben El Kadhi K, Decelle B, Talje L, Ma A, Kwok BH, Carreno S. The actin-binding ERM protein Moesin binds to and stabilizes microtubules at the cell cortex. The Journal of Cell Biology. 202: 251-60. PMID 23857773 DOI: 10.1083/jcb.201304052  1
2012 Mukherjee S, Diaz Valencia JD, Stewman S, Metz J, Monnier S, Rath U, Asenjo AB, Charafeddine RA, Sosa HJ, Ross JL, Ma A, Sharp DJ. Human Fidgetin is a microtubule severing the enzyme and minus-end depolymerase that regulates mitosis. Cell Cycle (Georgetown, Tex.). 11: 2359-66. PMID 22672901 DOI: 10.4161/cc.20849  1
2011 Zhang D, Grode KD, Stewman SF, Diaz-Valencia JD, Liebling E, Rath U, Riera T, Currie JD, Buster DW, Asenjo AB, Sosa HJ, Ross JL, Ma A, Rogers SL, Sharp DJ. Drosophila katanin is a microtubule depolymerase that regulates cortical-microtubule plus-end interactions and cell migration. Nature Cell Biology. 13: 361-70. PMID 21378981 DOI: 10.1038/ncb2206  1
2009 Mennella V, Tan DY, Buster DW, Asenjo AB, Rath U, Ma A, Sosa HJ, Sharp DJ. Motor domain phosphorylation and regulation of the Drosophila kinesin 13, KLP10A. The Journal of Cell Biology. 186: 481-90. PMID 19687256 DOI: 10.1083/jcb.200902113  1
2009 Wainman A, Buster DW, Duncan T, Metz J, Ma A, Sharp D, Wakefield JG. A new Augmin subunit, Msd1, demonstrates the importance of mitotic spindle-templated microtubule nucleation in the absence of functioning centrosomes. Genes & Development. 23: 1876-81. PMID 19684111 DOI: 10.1101/gad.532209  1
2009 Fernandez N, Chang Q, Buster DW, Sharp DJ, Ma A. A model for the regulatory network controlling the dynamics of kinetochore microtubule plus-ends and poleward flux in metaphase. Proceedings of the National Academy of Sciences of the United States of America. 106: 7846-51. PMID 19416899 DOI: 10.1073/pnas.0813228106  1
2009 Li Y, Qu X, Ma A, Smith GJ, Scherer NF, Dinner AR. Models of single-molecule experiments with periodic perturbations reveal hidden dynamics in RNA folding. The Journal of Physical Chemistry. B. 113: 7579-90. PMID 19415919 DOI: 10.1021/jp900225q  1
2008 Hu J, Ma A, Dinner AR. A two-step nucleotide-flipping mechanism enables kinetic discrimination of DNA lesions by AGT. Proceedings of the National Academy of Sciences of the United States of America. 105: 4615-20. PMID 18353991 DOI: 10.1073/pnas.0708058105  1
2007 Zhang M, Gong J, Ma A, Rice SA. Infrared multiphoton induced isomerization and dissociation of FCN, ClCN, and BrCN in liquid Ar: a classical simulation study. The Journal of Chemical Physics. 127: 144501. PMID 17935403 DOI: 10.1063/1.2772620  1
2006 Ma A, Hu J, Karplus M, Dinner AR. Implications of alternative substrate binding modes for catalysis by uracil-DNA glycosylase: an apparent discrepancy resolved. Biochemistry. 45: 13687-96. PMID 17105188 DOI: 10.1021/bi061061y  1
2006 Hu J, Ma A, Dinner AR. Bias annealing: a method for obtaining transition paths de novo. The Journal of Chemical Physics. 125: 114101. PMID 16999460 DOI: 10.1063/1.2335640  1
2006 Ma A, Nag A, Dinner AR. Dynamic coupling between coordinates in a model for biomolecular isomerization. The Journal of Chemical Physics. 124: 144911. PMID 16626249 DOI: 10.1063/1.2183768  1
2006 Hu J, Ma A, Dinner AR. Monte Carlo simulations of biomolecules: The MC module in CHARMM. Journal of Computational Chemistry. 27: 203-16. PMID 16323162 DOI: 10.1002/jcc.20327  1
2005 Ma A, Dinner AR. Automatic method for identifying reaction coordinates in complex systems. The Journal of Physical Chemistry. B. 109: 6769-79. PMID 16851762 DOI: 10.1021/jp045546c  1
2005 Gong J, Ma A, Rice SA. Controlled subnanosecond isomerization of HCN to CNH in solution. The Journal of Chemical Physics. 122: 204505. PMID 15945750 DOI: 10.1063/1.1913398  1
2005 Gong J, Ma A, Rice SA. Isomerization and dissociation dynamics of HCN in a picosecond infrared laser field: a full-dimensional classical study. The Journal of Chemical Physics. 122: 144311. PMID 15847526 DOI: 10.1063/1.1871893  1
2005 Gong J, Ma A, Rice SA. Binding nonpolar molecules in an attractive inverse square potential Physical Review a - Atomic, Molecular, and Optical Physics. 72. DOI: 10.1103/PhysRevA.72.063410  1
2004 Ma A, Stratt RM. Multiphonon vibrational relaxation in liquids: should it lead to an exponential-gap law? The Journal of Chemical Physics. 121: 11217-26. PMID 15634077 DOI: 10.1063/1.1819873  1
2003 Ma A, Stratt RM. Selecting the information content of two-dimensional Raman spectra in liquids Journal of Chemical Physics. 119: 8500-8510. DOI: 10.1063/1.1611873  1
2003 Ma A, Stratt RM. Multiphonon vibrational relaxation in liquids: An exploration of the idea and of the problems it causes for molecular dynamics algorithms Journal of Chemical Physics. 119: 6709-6718. DOI: 10.1063/1.1605735  1
2003 Ma A, Stratt RM. What Do We Learn from Two-Dimensional Raman Spectra by Varying the Polarization Conditions? Bulletin of the Korean Chemical Society. 24: 1126-1134.  1
2002 Ma A, Stratt RM. The molecular origins of the two-dimensional Raman spectrum of an atomic liquid. II. Instantaneous-normal-mode theory Journal of Chemical Physics. 116: 4972-4984. DOI: 10.1063/1.1453402  1
2002 Ma A, Stratt RM. The molecular origins of the two-dimensional Raman spectrum of an atomic liquid. I. Molecular dynamics simulation Journal of Chemical Physics. 116: 4962-4971. DOI: 10.1063/1.1453401  1
2000 Ma A, Stratt RM. Fifth-order raman spectrum of an atomic liquid: simulation and instantaneous-normal-mode calculation Physical Review Letters. 85: 1004-7. PMID 10991460 DOI: 10.1103/PhysRevLett.85.1004  1
1996 Sun L, Ma A, Wang Y, Liu C. Thermodynamic and kinetic study of gas-phase hydrolysis of CF3C(O)F to CF3COOH Acta Physico - Chimica Sinica. 12: 363-364.  1
1996 Ma A, Sun LP, Wang YX, Liu CB, Deng CH. A theoretical study of the decompositions of CF3CO and CF3C(O)O radicals Kao Teng Hsueh Hsiao Hua Heush Hsueh Pao/ Chemical Journal of Chinese Universities. 17: x30-780.  1
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