Ryan W. Benz, Ph.D. - Publications

2006 University of California, Irvine, Irvine, CA 
Theoretical and Computational Chemistry

8 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2011 Andronico A, Randall A, Benz RW, Baldi P. Data-driven high-throughput prediction of the 3-D structure of small molecules: review and progress. Journal of Chemical Information and Modeling. 51: 760-76. PMID 21417267 DOI: 10.1021/ci100223t  0.64
2010 Whisenant TC, Ho DT, Benz RW, Rogers JS, Kaake RM, Gordon EA, Huang L, Baldi P, Bardwell L. Computational prediction and experimental verification of new MAP kinase docking sites and substrates including Gli transcription factors. Plos Computational Biology. 6. PMID 20865152 DOI: 10.1371/journal.pcbi.1000908  0.64
2008 Baldi P, Benz RW. BLASTing small molecules--statistics and extreme statistics of chemical similarity scores. Bioinformatics (Oxford, England). 24: i357-65. PMID 18586735 DOI: 10.1093/bioinformatics/btn187  0.64
2008 Benz RW, Swamidass SJ, Baldi P. Discovery of power-laws in chemical space. Journal of Chemical Information and Modeling. 48: 1138-51. PMID 18522387 DOI: 10.1021/ci700353m  0.64
2007 Baldi P, Benz RW, Hirschberg DS, Swamidass SJ. Lossless compression of chemical fingerprints using integer entropy codes improves storage and retrieval. Journal of Chemical Information and Modeling. 47: 2098-109. PMID 17967006 DOI: 10.1021/ci700200n  0.64
2006 Castro-Román F, Benz RW, White SH, Tobias DJ. Investigation of finite system-size effects in molecular dynamics simulations of lipid bilayers. The Journal of Physical Chemistry. B. 110: 24157-64. PMID 17125387 DOI: 10.1021/jp064746g  0.64
2006 Benz RW, Nanda H, Castro-Román F, White SH, Tobias DJ. Diffraction-based density restraints for membrane and membrane-peptide molecular dynamics simulations. Biophysical Journal. 91: 3617-29. PMID 16950837 DOI: 10.1529/biophysj.106.084483  0.64
2005 Benz RW, Castro-Román F, Tobias DJ, White SH. Experimental validation of molecular dynamics simulations of lipid bilayers: a new approach. Biophysical Journal. 88: 805-17. PMID 15533925 DOI: 10.1529/biophysj.104.046821  0.64
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