Quanjiang Ji, Ph.D. - Publications

2014 Chemistry University of Chicago, Chicago, IL 

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Yu H, Wu Z, Chen X, Ji Q, Tao S. CRISPR-CBEI: a Designing and Analyzing Tool Kit for Cytosine Base Editor-Mediated Gene Inactivation. Msystems. 5. PMID 32963098 DOI: 10.1128/mSystems.00350-20  0.32
2020 Pi Y, Chen W, Ji Q. Structural Basis of Surface Protein SdrC. Biochemistry. PMID 32250096 DOI: 10.1021/Acs.Biochem.0C00124  0.4
2020 Zhang Y, Zhang H, Wang Z, Wu Z, Wang Y, Tang N, Xu X, Zhao S, Chen W, Ji Q. Programmable adenine deamination in bacteria using a Cas9-adenine-deaminase fusion. Chemical Science. 11: 1657-1664. PMID 32206285 DOI: 10.1039/C9Sc03784E  0.4
2020 Chen W, Ji Q. Genetic Manipulation of MRSA Using CRISPR/Cas9 Technology. Methods in Molecular Biology (Clifton, N.J.). 2069: 113-124. PMID 31523770 DOI: 10.1007/978-1-4939-9849-4_9  0.4
2019 Zhang Y, Sun X, Qian Y, Yi H, Song K, Zhu H, Zonta F, Chen W, Ji Q, Miersch S, Sidhu SS, Wu D. A potent anti-SpuE antibody allosterically inhibits type III secretion system and attenuates virulence of Pseudomonas aeruginosa. Journal of Molecular Biology. PMID 31682834 DOI: 10.1016/j.jmb.2019.10.026  0.4
2019 Chen W, Zhang H, Zhang Y, Wang Y, Gan J, Ji Q. Molecular basis for the PAM expansion and fidelity enhancement of an evolved Cas9 nuclease. Plos Biology. 17: e3000496. PMID 31603896 DOI: 10.1371/Journal.Pbio.3000496  0.4
2019 Fu T, Liu L, Yang QL, Wang Y, Xu P, Zhang L, Liu S, Dai Q, Ji Q, Xu GL, He C, Luo C, Zhang L. Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine. Chemical Science. 10: 7407-7417. PMID 31489163 DOI: 10.1039/C9Sc02807B  0.96
2019 He T, Wang R, Liu D, Walsh TR, Zhang R, Lv Y, Ke Y, Ji Q, Wei R, Liu Z, Shen Y, Wang G, Sun L, Lei L, Lv Z, et al. Emergence of plasmid-mediated high-level tigecycline resistance genes in animals and humans. Nature Microbiology. PMID 31133751 DOI: 10.1038/S41564-019-0445-2  0.4
2018 Chen W, Zhang Y, Zhang Y, Pi Y, Gu T, Song L, Wang Y, Ji Q. CRISPR/Cas9-based Genome Editing in Pseudomonas aeruginosa and Cytidine Deaminase-Mediated Base Editing in Pseudomonas Species. Iscience. 6: 222-231. PMID 30240613 DOI: 10.1016/J.Isci.2018.07.024  0.4
2018 Wang Y, Wang S, Chen W, Song L, Zhang Y, Shen Z, Yu F, Li M, Ji Q. Precise and efficient genome editing in using CRISPR-Cas9 and CRISPR-assisted cytidine deaminase. Applied and Environmental Microbiology. PMID 30217854 DOI: 10.1128/Aem.01834-18  0.4
2018 Gu T, Zhao S, Pi Y, Chen W, Chen C, Liu Q, Li M, Han D, Ji Q. Highly efficient base editing in using an engineered CRISPR RNA-guided cytidine deaminase. Chemical Science. 9: 3248-3253. PMID 29780457 DOI: 10.1039/C8Sc00637G  0.4
2018 Song L, Zhang Y, Chen W, Gu T, Zhang SY, Ji Q. Mechanistic insights into staphylopine-mediated metal acquisition. Proceedings of the National Academy of Sciences of the United States of America. PMID 29581261 DOI: 10.1073/Pnas.1718382115  0.4
2017 Chen W, Zhang Y, Yeo WS, Bae T, Ji Q. Rapid and Efficient Genome Editing in Staphylococcus aureus by Using an Engineered CRISPR/Cas9 System. Journal of the American Chemical Society. PMID 28218837 DOI: 10.1021/Jacs.6B13317  0.4
2017 Ji Q, Chen PJ, Qin G, Deng X, Hao Z, Wawrzak Z, Yeo WS, Quang JW, Cho H, Luo GZ, Weng X, You Q, Luan CH, Yang X, Bae T, et al. Retraction: Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus. Nature Communications. 8: 14331. PMID 28165458 DOI: 10.1038/Ncomms14331  0.96
2016 Ji Q, Wang P, He C. Extracorporeal shockwave therapy as a novel and potential treatment for degenerative cartilage and bone disease: Osteoarthritis. A qualitative analysis of the literature. Progress in Biophysics and Molecular Biology. PMID 27423987 DOI: 10.1016/j.pbiomolbio.2016.07.001  0.96
2016 Ji Q, He C. Extracorporeal shockwave therapy promotes chondrogenesis in cartilage tissue engineering: A hypothesis based on previous evidence. Medical Hypotheses. 91: 9-15. PMID 27142133 DOI: 10.1016/j.mehy.2016.03.013  0.96
2016 Ji Q, Chen PJ, Qin G, Deng X, Hao Z, Wawrzak Z, Yeo WS, Quang JW, Cho H, Luo GZ, Weng X, You Q, Luan CH, Yang X, Bae T, et al. Structure and mechanism of the essential two-component signal-transduction system WalKR in Staphylococcus aureus. Nature Communications. 7: 11000. PMID 26987594 DOI: 10.1038/Ncomms11000  0.36
2016 Qu N, Zhang L, Wu WL, Ji QH, Lu ZW, Zhu YX, Lin DZ. Bilaterality weighs more than unilateral multifocality in predicting prognosis in papillary thyroid cancer. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26743781 DOI: 10.1007/s13277-015-4533-5  0.4
2016 Ji Q, Zhang L, Yu F. The research on PGP encrypted email recovery Lecture Notes in Electrical Engineering. 348: 1107-1114. DOI: 10.1007/978-81-322-2580-5_101  0.4
2015 Qu N, Zhang L, Lu ZW, Ji QH, Yang SW, Wei WJ, Zhang Y. Predictive factors for recurrence of differentiated thyroid cancer in patients under 21 years of age and a meta-analysis of the current literature. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26695148 DOI: 10.1007/s13277-015-4532-6  0.4
2015 Gao Y, Qu N, Zhang L, Chen JY, Ji QH. Preoperative ultrasonography and serum thyroid-stimulating hormone on predicting central lymph node metastasis in thyroid nodules as or suspicious for papillary thyroid microcarcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26678888 DOI: 10.1007/s13277-015-4535-3  0.4
2015 Yin P, Ji Q, Li T, Li J, Li Z, Liu J, Wang G, Wang S, Zhang L, Mao Z, Tang P. A Systematic Review and Meta-Analysis of Ilizarov Methods in the Treatment of Infected Nonunion of Tibia and Femur. Plos One. 10: e0141973. PMID 26529606 DOI: 10.1371/journal.pone.0141973  0.4
2015 Zhang L, Ji QH, Ruge F, Lane C, Morris D, Tee AR, Dayan CM, Ludgate M. Reversal of pathological features of Graves' Orbitopathy by activation of Forkhead transcription factors, FOXOs. The Journal of Clinical Endocrinology and Metabolism. jc20152932. PMID 26502358 DOI: 10.1210/jc.2015-2932  0.4
2015 Lin R, Elf S, Shan C, Kang HB, Ji Q, Zhou L, Hitosugi T, Zhang L, Zhang S, Seo JH, Xie J, Tucker M, Gu TL, Sudderth J, Jiang L, et al. 6-Phosphogluconate dehydrogenase links oxidative PPP, lipogenesis and tumour growth by inhibiting LKB1-AMPK signalling. Nature Cell Biology. PMID 26479318 DOI: 10.1038/Ncb3255  0.96
2015 Zhang C, Xie Y, Luo X, Ji Q, Lu C, He C, Wang P. Effects of therapeutic ultrasound on pain, physical functions and safety outcomes in patients with knee osteoarthritis: A systematic review and meta-analysis. Clinical Rehabilitation. PMID 26451008 DOI: 10.1177/0269215515609415  0.96
2015 Xie S, Liu C, Yu Z, Ren T, Hou J, Chen L, Huang L, Cheng Y, Ji Q, Yin J, Zhang L, Shen W. One-stop-shop preoperative evaluation for living liver donors with Gd-EOB-DTPA-enhanced MRI: efficiency and additional benefit. Clinical Transplantation. PMID 26448564 DOI: 10.1111/ctr.12646  0.4
2015 Shi J, Liu M, Wen J, Ren X, Zhou X, Ji Q, Ma D, Zhang Y, Jin C, Chen H, Deng S, Xu N, Liu Z, Zhang Y. All Chemical Vapor Deposition Synthesis and Intrinsic Bandgap Observation of MoS2 /Graphene Heterostructures. Advanced Materials (Deerfield Beach, Fla.). PMID 26445312 DOI: 10.1002/Adma.201503342  0.4
2015 Wang YL, Sun JG, Wang J, Wei WJ, Zhu YX, Wang Y, Sun GH, Xu K, Li H, Zhang L, Ji QH. Schwannoma of the cervical esophagus: Report of 2 cases and a review of the literature. Ear, Nose, & Throat Journal. 94: E10-E13. PMID 26401673  0.4
2015 Ablikim M, Achasov MN, Ai XC, Albayrak O, Albrecht M, Ambrose DJ, Amoroso A, An FF, An Q, Bai JZ, Ferroli RB, Ban Y, Bennett DW, Bennett JV, Bertani M, ... ... Ji Q, ... ... Ji QP, et al. Observation and Spin-Parity Determination of the X(1835) in J/ψ→γK_{S}^{0}K_{S}^{0}η. Physical Review Letters. 115: 091803. PMID 26371642 DOI: 10.1103/Physrevlett.115.091803  0.4
2015 Chen JY, Zhang L, Ji QH, Li DS, Shen Q, Wang ZY, Huang CP, Wang Y, Zhu YX. Selective neck dissection for neck residue of nasopharyngeal carcinoma: A prospective study. Journal of Cranio-Maxillo-Facial Surgery : Official Publication of the European Association For Cranio-Maxillo-Facial Surgery. PMID 26293188 DOI: 10.1016/j.jcms.2015.06.037  0.4
2015 Chen Y, Liu B, Ju L, Hong J, Ji Q, Chen W, Zhu C. Fluorescence Biomembrane Force Probe: Concurrent Quantitation of Receptor-ligand Kinetics and Binding-induced Intracellular Signaling on a Single Cell. Journal of Visualized Experiments : Jove. PMID 26274371 DOI: 10.3791/52975  0.4
2015 Wan Z, Chen X, Chen H, Ji Q, Chen Y, Wang J, Cao Y, Wang F, Lou J, Tang Z, Liu W. The activation of IgM- or isotype-switched IgG- and IgE-BCR exhibits distinct mechanical force sensitivity and threshold. Elife. 4. PMID 26258882 DOI: 10.7554/Elife.06925  0.4
2015 Liu Y, Chen H, Wei Q, Xiao C, Ji Q, Bao G. Immune efficacy of five novel recombinant Bordetella bronchiseptica proteins. Bmc Veterinary Research. 11: 173. PMID 26223229 DOI: 10.1186/s12917-015-0488-4  0.4
2015 Xiao Y, Ji Q, Gao S, Tan H, Chen R, Li Q, Chen J, Yang Y, Zhang L, Wang Z, Chen W, Hu Z. Combined transcriptome and metabolite profiling reveals that IiPLR1 plays an important role in lariciresinol accumulation in Isatis indigotica. Journal of Experimental Botany. PMID 26163698 DOI: 10.1093/jxb/erv333  0.4
2015 Zhang Q, Ji Q, Wang X, Kang L, Fu Y, Yin Y, Li Z, Liu Y, Xu X, Wang Y. SOX9 is a regulator of ADAMTSs-induced cartilage degeneration at the early stage of human osteoarthritis. Osteoarthritis and Cartilage / Oars, Osteoarthritis Research Society. PMID 26162802 DOI: 10.1016/j.joca.2015.06.014  0.4
2015 Kang HB, Fan J, Lin R, Elf S, Ji Q, Zhao L, Jin L, Seo JH, Shan C, Arbiser JL, Cohen C, Brat D, Miziorko HM, Kim E, Abdel-Wahab O, et al. Metabolic Rewiring by Oncogenic BRAF V600E Links Ketogenesis Pathway to BRAF-MEK1 Signaling. Molecular Cell. PMID 26145173 DOI: 10.1016/J.Molcel.2015.05.037  0.36
2015 Zhou YJ, Wang P, Chen HY, Liu C, Ji QD, Yang XT, Gao Q, He CQ. [Effect of Pulsed Electromagnetic Fields on Osteogenic Differentiation and Wnt/β-catenin Signaling Pathway in Rat Bone Marrow Mesenchymal Stem Cells]. Sichuan Da Xue Xue Bao. Yi Xue Ban = Journal of Sichuan University. Medical Science Edition. 46: 347-53. PMID 26121850  0.64
2015 Qu N, Zhang L, Ji QH, Chen JY, Zhu YX, Cao YM, Shen Q. Risk Factors for Central Compartment Lymph Node Metastasis in Papillary Thyroid Microcarcinoma: A Meta-Analysis. World Journal of Surgery. PMID 26099728 DOI: 10.1007/s00268-015-3108-3  0.4
2015 Deng X, Chen K, Luo GZ, Weng X, Ji Q, Zhou T, He C. Widespread occurrence of N6-methyladenosine in bacterial mRNA. Nucleic Acids Research. 43: 6557-67. PMID 26068471 DOI: 10.1093/Nar/Gkv596  0.36
2015 Zhang H, Ji Q, Huang C, Zhang S, Yuan B, Yang K, Ma YQ. Cooperative transmembrane penetration of nanoparticles. Scientific Reports. 5: 10525. PMID 26013284 DOI: 10.1038/srep10525  0.32
2015 Liu F, Zhu S, Ji Q, Li W, Liu J. The impact of intra-abdominal pressure on the stroke volume variation and plethysmographic variability index in patients undergoing laparoscopic cholecystectomy. Bioscience Trends. 9: 129-33. PMID 25971699 DOI: 10.5582/bst.2015.01029  0.4
2015 Fu Y, Luo GZ, Chen K, Deng X, Yu M, Han D, Hao Z, Liu J, Lu X, Doré LC, Weng X, Ji Q, Mets L, He C. N6-methyldeoxyadenosine marks active transcription start sites in chlamydomonas. Cell. 161: 879-92. PMID 25936837 DOI: 10.1016/J.Cell.2015.04.010  0.96
2015 Dong H, Zhang L, Qian Z, Zhu X, Zhu G, Chen Y, Xie X, Ye Q, Zang J, Ren Z, Ji Q. Identification of HBV-MLL4 Integration and Its Molecular Basis in Chinese Hepatocellular Carcinoma. Plos One. 10: e0123175. PMID 25901726 DOI: 10.1371/journal.pone.0123175  0.4
2015 Yu DH, Tang L, Dong H, Dong Z, Zhang L, Fu J, Su X, Zhang T, Fu H, Han L, Xie L, Chen H, Qian Z, Zhu G, Wang J, ... ... Ji Q, et al. Oncogenic HER2 fusions in gastric cancer. Journal of Translational Medicine. 13: 116. PMID 25889497 DOI: 10.1186/s12967-015-0476-2  0.4
2015 Tan H, Xiao L, Gao S, Li Q, Chen J, Xiao Y, Ji Q, Chen R, Chen W, Zhang L. TRICHOME AND ARTEMISININ REGULATOR 1 Is Required for Trichome Development and Artemisinin Biosynthesis in Artemisia annua. Molecular Plant. PMID 25870149 DOI: 10.1016/j.molp.2015.04.002  0.4
2015 Chai M, Ji Q, Zhang H, Zhou Y, Yang Q, Zhou Y, Guo G, Liu W, Han W, Yang L, Zhang L, Liang J, Liu Y, Shi D, Zhao Y. The Protective Effect of Interleukin-37 on Vascular Calcification and Atherosclerosis in Apolipoprotein E-Deficient Mice with Diabetes. Journal of Interferon & Cytokine Research : the Official Journal of the International Society For Interferon and Cytokine Research. 35: 530-9. PMID 25866993 DOI: 10.1089/jir.2014.0212  0.4
2015 Zhang H, Zheng GL, Lv G, Geng YZ, Ji Q. Covalent intermolecular interaction of the nitric oxide dimer (NO)2 Chinese Physics B. 24. DOI: 10.1088/1674-1056/24/9/093101  0.32
2015 Dong H, Qian Z, Zhang L, Chen Y, Ren Z, Ji Q. Genomic and transcriptome profiling identified both human and HBV genetic variations and their interactions in Chinese hepatocellular carcinoma Genomics Data. 6: 1-3. DOI: 10.1016/j.gdata.2015.07.018  0.4
2015 Ji Q, Ma Z, Deng X. Volunteer study and serum protein profiling to understand inflammatory response induced by Satsuma mandarin Food Research International. 75: 367-373. DOI: 10.1016/j.foodres.2015.04.030  0.36
2014 Shan C, Elf S, Ji Q, Kang HB, Zhou L, Hitosugi T, Jin L, Lin R, Zhang L, Seo JH, Xie J, Tucker M, Gu TL, Sudderth J, Jiang L, et al. Lysine acetylation activates 6-phosphogluconate dehydrogenase to promote tumor growth. Molecular Cell. 55: 552-65. PMID 25042803 DOI: 10.1016/J.Molcel.2014.06.020  0.96
2014 Wang P, Liu C, Yang X, Zhou Y, Wei X, Ji Q, Yang L, He C. Effects of low-level laser therapy on joint pain, synovitis, anabolic, and catabolic factors in a progressive osteoarthritis rabbit model. Lasers in Medical Science. 29: 1875-85. PMID 24890034 DOI: 10.1007/s10103-014-1600-x  0.96
2014 Deng X, Liang H, Ulanovskaya OA, Ji Q, Zhou T, Sun F, Lu Z, Hutchison AL, Lan L, Wu M, Cravatt BF, He C. Steady-state hydrogen peroxide induces glycolysis in Staphylococcus aureus and Pseudomonas aeruginosa. Journal of Bacteriology. 196: 2499-513. PMID 24769698 DOI: 10.1128/Jb.01538-14  0.64
2014 Chen W, Zhang L, Zheng G, Fu Y, Ji Q, Liu F, Chen H, He C. Crystal structure of the RNA demethylase ALKBH5 from zebrafish. Febs Letters. 588: 892-8. PMID 24561204 DOI: 10.1016/J.Febslet.2014.02.021  0.64
2014 Wang P, Wei XF, Yang XT, Zhou YJ, Liu C, Ji QD, Yang L, He CQ. [Effects of whole body vibration on structural and functional remodeling of subchondral bones in rabbits with early osteoarthritis]. Sichuan Da Xue Xue Bao. Yi Xue Ban = Journal of Sichuan University. Medical Science Edition. 45: 111-5. PMID 24527595  0.96
2013 Ji Q, Zhao BS, He C. A highly sensitive and genetically encoded fluorescent reporter for ratiometric monitoring of quinones in living cells. Chemical Communications (Cambridge, England). 49: 8027-9. PMID 23903292 DOI: 10.1039/C3Cc44534H  0.64
2013 Deng X, Weerapana E, Ulanovskaya O, Sun F, Liang H, Ji Q, Ye Y, Fu Y, Zhou L, Li J, Zhang H, Wang C, Alvarez S, Hicks LM, Lan L, et al. Proteome-wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria. Cell Host & Microbe. 13: 358-70. PMID 23498960 DOI: 10.1016/J.Chom.2013.02.004  0.64
2013 Ji Q, Zhang L, Jones MB, Sun F, Deng X, Liang H, Cho H, Brugarolas P, Gao YN, Peterson SN, Lan L, Bae T, He C. Molecular mechanism of quinone signaling mediated through S-quinonization of a YodB family repressor QsrR. Proceedings of the National Academy of Sciences of the United States of America. 110: 5010-5. PMID 23479646 DOI: 10.1073/Pnas.1219446110  0.64
2013 Liang H, Deng X, Bosscher M, Ji Q, Jensen MP, He C. Engineering bacterial two-component system PmrA/PmrB to sense lanthanide ions. Journal of the American Chemical Society. 135: 2037-9. PMID 23350529 DOI: 10.1021/Ja312032C  0.64
2012 Sun F, Ding Y, Ji Q, Liang Z, Deng X, Wong CC, Yi C, Zhang L, Xie S, Alvarez S, Hicks LM, Luo C, Jiang H, Lan L, He C. Protein cysteine phosphorylation of SarA/MgrA family transcriptional regulators mediates bacterial virulence and antibiotic resistance. Proceedings of the National Academy of Sciences of the United States of America. 109: 15461-6. PMID 22927394 DOI: 10.1073/Pnas.1205952109  0.64
2012 Jeong DW, Cho H, Jones MB, Shatzkes K, Sun F, Ji Q, Liu Q, Peterson SN, He C, Bae T. The auxiliary protein complex SaePQ activates the phosphatase activity of sensor kinase SaeS in the SaeRS two-component system of Staphylococcus aureus. Molecular Microbiology. 86: 331-48. PMID 22882143 DOI: 10.1111/J.1365-2958.2012.08198.X  0.64
2012 Sun F, Liang H, Kong X, Xie S, Cho H, Deng X, Ji Q, Zhang H, Alvarez S, Hicks LM, Bae T, Luo C, Jiang H, He C. Quorum-sensing agr mediates bacterial oxidation response via an intramolecular disulfide redox switch in the response regulator AgrA. Proceedings of the National Academy of Sciences of the United States of America. 109: 9095-100. PMID 22586129 DOI: 10.1073/Pnas.1200603109  0.64
2012 Ji Q, Zhang L, Sun F, Deng X, Liang H, Bae T, He C. Staphylococcus aureus CymR is a new thiol-based oxidation-sensing regulator of stress resistance and oxidative response. The Journal of Biological Chemistry. 287: 21102-9. PMID 22553203 DOI: 10.1074/Jbc.M112.359737  0.64
2012 Liang H, Deng X, Ji Q, Sun F, Shen T, He C. The Pseudomonas aeruginosa global regulator VqsR directly inhibits QscR to control quorum-sensing and virulence gene expression. Journal of Bacteriology. 194: 3098-108. PMID 22505688 DOI: 10.1128/Jb.06679-11  0.64
2012 Deng X, Sun F, Ji Q, Liang H, Missiakas D, Lan L, He C. Expression of multidrug resistance efflux pump gene norA is iron responsive in Staphylococcus aureus. Journal of Bacteriology. 194: 1753-62. PMID 22267518 DOI: 10.1128/Jb.06582-11  0.64
2012 Sun F, Ji Q, Jones MB, Deng X, Liang H, Frank B, Telser J, Peterson SN, Bae T, He C. AirSR, a [2Fe-2S] cluster-containing two-component system, mediates global oxygen sensing and redox signaling in Staphylococcus aureus. Journal of the American Chemical Society. 134: 305-14. PMID 22122613 DOI: 10.1021/Ja2071835  0.64
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