Yinan Wei, Ph.D. - Publications

2003 Princeton University, Princeton, NJ 
Synthetic Biology and Alzheimer's Disease

80 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhang C, Sun M, Wei Y, Zhang H, Xie S, Liu T. Automatic segmentation of arterial tree from 3D computed tomographic pulmonary angiography (CTPA) scans. Computer Assisted Surgery (Abingdon, England). 1-8. PMID 31401886 DOI: 10.1080/24699322.2019.1649077  0.4
2018 Sun X, Li D, Wang Z, Yin P, Hu R, Li H, Liu Q, Gao Y, Ren B, Zheng J, Wei Y, Liu T. Role of Protein Charge Density on Hepatitis B Virus Capsid Formation. Acs Omega. 3: 4384-4391. PMID 31458664 DOI: 10.1021/acsomega.8b00021  0.4
2018 Sun X, Li D, Wang Z, Liu Q, Wei Y, Liu T. A dimorphism shift of hepatitis B virus capsids in response to ionic conditions. Nanoscale. PMID 30183040 DOI: 10.1039/c8nr03370f  0.4
2017 Piao Z, Wang W, Wei Y, Zonta F, Wan C, Bai J, Wu S, Wang X, Fang J. Characterization of an acetohydroxy acid synthase mutant conferring tolerance to imidazolinone herbicides in rice (Oryza sativa). Planta. PMID 29170911 DOI: 10.1007/s00425-017-2817-2  0.44
2016 Chai Q, Webb SR, Wang Z, Dutch RE, Wei Y. Study of the degradation of a multidrug transporter using a non-radioactive pulse chase method. Analytical and Bioanalytical Chemistry. PMID 27549795 DOI: 10.1007/s00216-016-9871-7  0.88
2016 Chai Q, Wang Z, Webb SR, Dutch RE, Wei Y. The ssrA-tag facilitated degradation of an integral membrane protein. Biochemistry. PMID 27078234 DOI: 10.1021/acs.biochem.6b00038  0.88
2016 Zhang T, Chen X, Chu X, Shen Y, Jiao W, Wei Y, Qiu T, Yan G, Wang X, Xu L. Slug overexpression is associated with poor prognosis in thymoma patients Oncology Letters. 11: 306-310. DOI: 10.3892/ol.2015.3851  0.36
2016 Cai X, Guan J, Ren S, Wei Y, Peng X, Qiu W, Chen J. Treatment of internal carotid artery dissection with willis covered stent: A case report of recurrent limb weakness and no response to medical therapy Experimental and Therapeutic Medicine. 11: 1983-1986. DOI: 10.3892/etm.2016.3112  0.44
2016 Wei Y, Xu M, Wu H, Tu S, Pan L, Tu K. Defense response of cherry tomato at different maturity stages to combined treatment of hot air and Cryptococcus laurentii Postharvest Biology and Technology. 117: 177-186. DOI: 10.1016/j.postharvbio.2016.03.001  0.4
2016 Yu L, Liu H, Shao X, Yu F, Wei Y, Ni Z, Xu F, Wang H. Effects of hot air and methyl jasmonate treatment on the metabolism of soluble sugars in peach fruit during cold storage Postharvest Biology and Technology. 113: 8-16. DOI: 10.1016/j.postharvbio.2015.10.013  0.4
2016 Zhang S, Wang J, Xu Z, Song C, Wang R, Chen Y, Zhao J, Wei Y. Attenuation analysis of long-haul NLOS atmospheric optical scattering communication Optics and Laser Technology. 80: 51-55. DOI: 10.1016/j.optlastec.2015.12.014  0.36
2016 Zhan X, Gu C, Wu H, Liu H, Chen J, Wei Y. Experimental and numerical analysis on the strength of 2060 Al-Li alloy adhesively bonded T joints International Journal of Adhesion and Adhesives. 65: 79-87. DOI: 10.1016/j.ijadhadh.2015.11.010  0.4
2016 Wei Y, Zhang J, Wu W, Yao Y, Chen J, Fang J. A preliminary study of the reproductive biology of the biofouling organism Caprella acanthogaster (Crustacea, Amphipoda) in Sanggou Bay, China Aquaculture. 450: 1-5. DOI: 10.1016/j.aquaculture.2015.06.037  0.44
2015 Liu H, Liu X, Zhang S, Lv J, Li S, Shang S, Jia S, Wei Y, Wang F, Su J, Wu Q, Zhang Y. Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the regulation of cell identity genes. Nucleic Acids Research. PMID 26635396 DOI: 10.1093/nar/gkv1332  0.4
2015 Tao H, Wei Y, Wang C, Yang K, Huang W, Liu H, Li B. Expression of chemokine receptor CXCR4 is closely correlated with clinical outcome in human nasopharyngeal carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26611644 DOI: 10.1007/s13277-015-4464-1  0.4
2015 Qian Y, Wang X, Lv Z, Guo C, Han M, Wu J, Yang Y, Yang Y, Jiang Y, Wei Y, Nie J, Liang B, Zhang J, Wang X. A novel quantification method for the total demethylation potential of aquatic sample extracts from Bohai Bay using the EGFP reporter gene. Bmc Biotechnology. 15: 107. PMID 26610601 DOI: 10.1186/s12896-015-0224-y  0.44
2015 Bu M, Tang J, Wei Y, Sun Y, Wang X, Wu L, Liu H. Enhanced bioavailability of nerve growth factor with phytantriol lipid-based crystalline nanoparticles in cochlea. International Journal of Nanomedicine. 10: 6879-89. PMID 26604754 DOI: 10.2147/IJN.S82944  0.4
2015 Zhu Y, Jia H, Chen J, Cui G, Gao H, Wei Y, Lu C, Wang L, Uede T, Diao H. Decreased Osteopontin Expression as a Reliable Prognostic Indicator of Improvement in Pulmonary Tuberculosis: Impact of the Level of Interferon-x03B3;-Inducible Protein 10. Cellular Physiology and Biochemistry : International Journal of Experimental Cellular Physiology, Biochemistry, and Pharmacology. 37: 1983-96. PMID 26584297 DOI: 10.1159/000438559  0.44
2015 Wei Y, Zhang S, Shang S, Zhang B, Li S, Wang X, Wang F, Su J, Wu Q, Liu H, Zhang Y. SEA: a super-enhancer archive. Nucleic Acids Research. PMID 26578594 DOI: 10.1093/nar/gkv1243  0.4
2015 Wang LS, Hu Y, Li CL, Li Y, Wei YR, Yin ZF, Du YK, Min Z, Weng D, Chen JM, Li HP. N-acetylcysteine attenuates cigaret smoke-induced pulmonary exacerbation in a mouse model of emphysema. Inhalation Toxicology. 1-8. PMID 26572172 DOI: 10.3109/08958378.2015.1110217  0.32
2015 Shao B, Wei X, Luo M, Yu J, Tong A, Ma X, Ye T, Deng H, Sang Y, Liang X, Ma Y, Wu Q, Du W, Du J, Gao X, ... ... Wei Y, et al. Inhibition of A20 expression in tumor microenvironment exerts anti-tumor effect through inducing myeloid-derived suppressor cells apoptosis. Scientific Reports. 5: 16437. PMID 26561336 DOI: 10.1038/srep16437  0.36
2015 Chen K, She S, Zhang J, Bayaguud A, Wei Y. Label-free colorimetric detection of mercury via Hg(2+) ions-accelerated structural transformation of nanoscale metal-oxo clusters. Scientific Reports. 5: 16316. PMID 26559602 DOI: 10.1038/srep16316  0.44
2015 Zhang T, Yang J, Ding C, Li Y, Gu L, Wei Y, Cao L, Gong J, Zhu W, Li N, Li J. Preoperative Intra-abdominal Sepsis, Not Penetrating Behavior Itself, Is Associated With Worse Postoperative Outcome After Bowel Resection for Crohn Disease: A Retrospective Cohort Study. Medicine. 94: e1987. PMID 26559283 DOI: 10.1097/MD.0000000000001987  0.36
2015 Liu AD, Cai GH, Wei YY, Yu JP, Chen J, Yang J, Wang X, Che YW, Chen JZ, Wu SX. Anxiolytic effect of essential oils of Salvia miltiorrhiza in rats. International Journal of Clinical and Experimental Medicine. 8: 12756-64. PMID 26550189  0.36
2015 He ZY, Shi K, Wei YQ, Qian ZY. Recent Advances of Poly(ether-ether) and Poly(ether-ester) Block Copolymers in Biomedical Applications. Current Drug Metabolism. PMID 26526833  0.36
2015 Fang C, Wei X, Wei Y. Mitochondrial DNA in the regulation of innate immune responses. Protein & Cell. PMID 26498951 DOI: 10.1007/s13238-015-0222-9  0.36
2015 Ma S, Yang LL, Niu T, Cheng C, Zhong L, Zheng MW, Xiong Y, Li LL, Xiang R, Chen LJ, Zhou Q, Wei YQ, Yang SY. SKLB-677, an FLT3 and Wnt/β-catenin signaling inhibitor, displays potent activity in models of FLT3-driven AML. Scientific Reports. 5: 15646. PMID 26497577 DOI: 10.1038/srep15646  0.36
2015 Li K, Gao B, Li J, Chen H, Li Y, Wei Y, Gong D, Gao J, Zhang J, Tan W, Wen T, Zhang L, Huang L, Xiang R, Lin P, ... Wei Y, et al. ZNF32 protects against oxidative stress-induced apoptosis by modulating C1QBP transcription. Oncotarget. PMID 26497555 DOI: 10.18632/oncotarget.5646  0.44
2015 Zhang J, Lv C, Tong J, Liu J, Liu J, Yu D, Wang Y, Chen M, Wei Y. Optimization and microbial community analysis of anaerobic co-digestion of food waste and sewage sludge based on microwave pretreatment. Bioresource Technology. 200: 253-261. PMID 26496214 DOI: 10.1016/j.biortech.2015.10.037  0.44
2015 Jiang C, Wang Q, Wei Y, Yao N, Wu Z, Ma Y, Lin Z, Zhao M, Che C, Yao X, Zhang J, Yin Z. Cholesterol-lowering effects and potential mechanisms of different polar extracts from Cyclocarya paliurus leave in hyperlipidemic mice. Journal of Ethnopharmacology. PMID 26477373 DOI: 10.1016/j.jep.2015.10.006  0.44
2015 Chen JM, Guo J, Wei CD, Wang CF, Luo HC, Wei YS, Lan Y. The association of CD40 polymorphisms with CD40 serum levels and risk of systemic lupus erythematosus. Bmc Genetics. 16: 121. PMID 26474561 DOI: 10.1186/s12863-015-0279-8  0.32
2015 Tian J, Wei Y, Wang L, Guo J, Zhou Q, Zhu W. [Relationship between genetic polymorphisms of IRF6 rs642961 and nonsysdromic cleft lip with or without cleft palate]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 44: 543-8. PMID 26454948  0.32
2015 Wang Z, Ye C, Zhang X, Wei Y. Cysteine residue is not essential for CPM protein thermal-stability assay. Analytical and Bioanalytical Chemistry. 407: 3683-91. PMID 25772562 DOI: 10.1007/s00216-015-8587-4  0.88
2015 Wang Z, Zhong M, Lu W, Chai Q, Wei Y. Repressive mutations restore function-loss caused by the disruption of trimerization in Escherichia coli multidrug transporter AcrB. Frontiers in Microbiology. 6: 4. PMID 25657644 DOI: 10.3389/fmicb.2015.00004  0.88
2015 Gajadeera CS, Zhang X, Wei Y, Tsodikov OV. Structure of inorganic pyrophosphatase from Staphylococcus aureus reveals conformational flexibility of the active site. Journal of Structural Biology. 189: 81-6. PMID 25576794 DOI: 10.1016/j.jsb.2014.12.003  0.88
2015 Jiang Y, Yang M, Wu H, Song H, Zhan F, Liu S, Gao G, Liu Z, Hu Z, He P, Zhang S, Hu Z, Lin Z, Zhang Y, Li Y, ... ... Wei Y, et al. The relationship between disease activity measured by the BASDAI and psychological status, stressful life events, and sleep quality in ankylosing spondylitis. Clinical Rheumatology. 34: 503-10. PMID 24946723 DOI: 10.1007/s10067-014-2688-x  0.4
2014 Ye C, Wang Z, Lu W, Zhong M, Chai Q, Wei Y. Correlation between AcrB trimer association affinity and efflux activity. Biochemistry. 53: 3738-46. PMID 24854514 DOI: 10.1021/bi5000838  0.88
2014 Ye C, Wang Z, Lu W, Wei Y. Unfolding study of a trimeric membrane protein AcrB. Protein Science : a Publication of the Protein Society. 23: 897-905. PMID 24715637 DOI: 10.1002/pro.2471  0.88
2014 Chai Q, Ferrell B, Zhong M, Zhang X, Ye C, Wei Y. Diverse sequences are functional at the C-terminus of the E. coli periplasmic chaperone SurA. Protein Engineering, Design & Selection : Peds. 27: 111-6. PMID 24586054 DOI: 10.1093/protein/gzu003  0.88
2014 Lu W, Zhong M, Chai Q, Wang Z, Yu L, Wei Y. Functional relevance of AcrB Trimerization in pump assembly and substrate binding. Plos One. 9: e89143. PMID 24551234 DOI: 10.1371/journal.pone.0089143  0.88
2014 Nehru N, Yu L, Wei Y, Hastings JT. Using U-shaped localized surface plasmon resonance sensors to compensate for nonspecific interactions Ieee Transactions On Nanotechnology. 13: 55-61. DOI: 10.1109/TNANO.2013.2287700  0.88
2013 Yu L, Lu W, Ye C, Wang Z, Zhong M, Chai Q, Sheetz M, Wei Y. Role of a conserved residue R780 in Escherichia coli multidrug transporter AcrB. Biochemistry. 52: 6790-6. PMID 24007302 DOI: 10.1021/bi400452v  0.88
2013 Zhong M, Ferrell B, Lu W, Chai Q, Wei Y. Insights into the function and structural flexibility of the periplasmic molecular chaperone SurA. Journal of Bacteriology. 195: 1061-7. PMID 23275244 DOI: 10.1128/JB.01143-12  0.88
2013 Ye C, Chai Q, Zhong M, Wei Y. Effect of crowding by Ficolls on OmpA and OmpT refolding and membrane insertion. Protein Science : a Publication of the Protein Society. 22: 239-45. PMID 23225740 DOI: 10.1002/pro.2205  0.88
2013 Baker NA, Karounos M, English V, Fang J, Wei Y, Stromberg A, Sunkara M, Morris AJ, Swanson HI, Cassis LA. Coplanar polychlorinated biphenyls impair glucose homeostasis in lean C57BL/6 mice and mitigate beneficial effects of weight loss on glucose homeostasis in obese mice. Environmental Health Perspectives. 121: 105-10. PMID 23099484 DOI: 10.1289/ehp.1205421  0.88
2013 Fang J, Yu L, Wu M, Wei Y. Dissecting the function of a protruding loop in AcrB trimerization. Journal of Biomolecular Structure & Dynamics. 31: 385-92. PMID 22877148 DOI: 10.1080/07391102.2012.703065  0.88
2012 Subramani A, Wei Y, Floudas CA. ASTRO-FOLD 2.0: an Enhanced Framework for Protein Structure Prediction. Aiche Journal. American Institute of Chemical Engineers. 58: 1619-1637. PMID 23049093 DOI: 10.1002/aic.12669  0.4
2012 Knecht LD, Ali N, Wei Y, Hilt JZ, Daunert S. Nanoparticle-mediated remote control of enzymatic activity. Acs Nano. 6: 9079-86. PMID 22989219 DOI: 10.1021/nn303308v  0.88
2012 Lu W, Chai Q, Zhong M, Yu L, Fang J, Wang T, Li H, Zhu H, Wei Y. Assembling of AcrB trimer in cell membrane. Journal of Molecular Biology. 423: 123-34. PMID 22766312 DOI: 10.1016/j.jmb.2012.06.036  0.88
2012 Deo S, Wei Y, Daunert S. Probing a myth: does the younger generation of scientists have it easier? Analytical and Bioanalytical Chemistry. 403: 2065-7. PMID 22644148 DOI: 10.1007/s00216-012-6083-7  0.88
2012 Yewle JN, Wei Y, Puleo DA, Daunert S, Bachas LG. Oriented immobilization of proteins on hydroxyapatite surface using bifunctional bisphosphonates as linkers. Biomacromolecules. 13: 1742-9. PMID 22559170 DOI: 10.1021/bm201865r  0.88
2012 Nehru N, Donev EU, Huda GM, Yu L, Wei Y, Hastings JT. Differentiating surface and bulk interactions using localized surface plasmon resonances of gold nanorods. Optics Express. 20: 6905-14. PMID 22453368 DOI: 10.1364/OE.20.006905  0.88
2012 Geng S, Fang J, Turner KB, Daunert S, Wei Y. Accumulation and efflux of polychlorinated biphenyls in Escherichia coli. Analytical and Bioanalytical Chemistry. 403: 2403-9. PMID 22349406 DOI: 10.1007/s00216-012-5835-8  0.88
2012 Nehru N, Yu L, Wei Y, Todd Hastings J. Multi-mode localized surface plasmon resonance sensors for compensation of interfering effects Proceedings of the Ieee Conference On Nanotechnology. DOI: 10.1109/NANO.2012.6322142  0.88
2011 Yu L, Lu W, Wei Y. AcrB trimer stability and efflux activity, insight from mutagenesis studies. Plos One. 6: e28390. PMID 22163011 DOI: 10.1371/journal.pone.0028390  0.88
2011 Lu W, Zhong M, Wei Y. Folding of AcrB Subunit Precedes Trimerization. Journal of Molecular Biology. 411: 264-74. PMID 21664361 DOI: 10.1016/j.jmb.2011.05.042  0.88
2011 Lu W, Zhong M, Wei Y. A reporter platform for the monitoring of in vivo conformational changes in AcrB. Protein and Peptide Letters. 18: 863-71. PMID 21529338 DOI: 10.2174/092986611796011446  0.88
2011 Fang J, Zhang X, Cai Y, Wei Y. Small globular protein motif forms particulate hydrogel under various pH conditions. Biomacromolecules. 12: 1578-84. PMID 21413697 DOI: 10.1021/bm101571r  0.88
2011 Das A, Wei Y, Pelczer I, Hecht MH. Binding of small molecules to cavity forming mutants of a de novo designed protein. Protein Science : a Publication of the Protein Society. 20: 702-11. PMID 21328630 DOI: 10.1002/pro.601  0.88
2011 Fang J, Wei Y. Expression, purification and characterization of the Escherichia coli integral membrane protein YajC. Protein and Peptide Letters. 18: 601-8. PMID 21235483 DOI: 10.2174/092986611795222713  0.88
2010 Yu L, Zhong M, Wei Y. Direct fluorescence polarization assay for the detection of glycopeptide antibiotics. Analytical Chemistry. 82: 7044-8. PMID 20704393 DOI: 10.1021/ac100543e  0.88
2010 Zhong M, Fang J, Wei Y. Site specific and reversible protein immobilization facilitated by a DNA binding fusion tag. Bioconjugate Chemistry. 21: 1177-82. PMID 20583781 DOI: 10.1021/bc9005392  0.88
2010 Wei Y, Daunert S. Enabling technologies in discovery: the 2009 Nobel Prize and its implications in antibiotic design. Analytical and Bioanalytical Chemistry. 396: 1623-6. PMID 20127083 DOI: 10.1007/s00216-009-3427-z  0.88
2010 Fang J, Yu L, Gao P, Cai Y, Wei Y. Detection of protein-DNA interaction and regulation using gold nanoparticles. Analytical Biochemistry. 399: 262-7. PMID 19917263 DOI: 10.1016/j.ab.2009.11.013  0.88
2009 Bachas-Daunert PG, Sellers ZP, Wei Y. Detection of halogenated organic compounds using immobilized thermophilic dehalogenase. Analytical and Bioanalytical Chemistry. 395: 1173-8. PMID 19714319 DOI: 10.1007/s00216-009-3057-5  0.88
2009 Ehrick JD, Luckett MR, Khatwani S, Wei Y, Deo SK, Bachas LG, Daunert S. Glucose responsive hydrogel networks based on protein recognition. Macromolecular Bioscience. 9: 864-8. PMID 19434674 DOI: 10.1002/mabi.200800337  0.88
2009 Bachas-Daunert PG, Law SA, Wei Y. Characterization of a recombinant thermostable dehalogenase isolated from the hot spring thermophile Sulfolobus tokodaii. Applied Biochemistry and Biotechnology. 159: 382-93. PMID 19266316 DOI: 10.1007/s12010-009-8589-9  0.88
2009 Yu L, Fang J, Wei Y. Characterization of the ligand and DNA binding properties of a putative archaeal regulator ST1710. Biochemistry. 48: 2099-108. PMID 19166356 DOI: 10.1021/bi801662s  0.88
2008 Teasley Hamorsky K, Ensor CM, Wei Y, Daunert S. A bioluminescent molecular switch for glucose. Angewandte Chemie (International Ed. in English). 47: 3718-21. PMID 18383457 DOI: 10.1002/anie.200704440  0.88
2007 Hastings JT, Guo J, Keathley PD, Kumaresh PB, Wei Y, Law S, Bachas LG. Optimal self-referenced sensing using long- and short- range surface plasmons. Optics Express. 15: 17661-72. PMID 19551062 DOI: 10.1364/OE.15.017661  0.88
2007 Bradley LH, Wei Y, Thumfort P, Wurth C, Hecht MH. Protein design by binary patterning of polar and nonpolar amino acids. Methods in Molecular Biology (Clifton, N.J.). 352: 155-66. PMID 17041264 DOI: 10.1385/1-59745-187-8:155  0.88
2006 Wei Y, Fu D. Binding and transport of metal ions at the dimer interface of the Escherichia coli metal transporter YiiP. The Journal of Biological Chemistry. 281: 23492-502. PMID 16790427 DOI: 10.1074/jbc.M602254200  0.88
2005 Wei Y, Fu D. Selective metal binding to a membrane-embedded aspartate in the Escherichia coli metal transporter YiiP (FieF). The Journal of Biological Chemistry. 280: 33716-24. PMID 16049012 DOI: 10.1074/jbc.M506107200  0.88
2005 Klepeis JL, Wei Y, Hecht MH, Floudas CA. Ab initio prediction of the three-dimensional structure of a de novo designed protein: a double-blind case study. Proteins. 58: 560-70. PMID 15609306 DOI: 10.1002/prot.20338  0.88
2004 Wei Y, Li H, Fu D. Oligomeric state of the Escherichia coli metal transporter YiiP. The Journal of Biological Chemistry. 279: 39251-9. PMID 15258151 DOI: 10.1074/jbc.M407044200  0.88
2004 Hecht MH, Das A, Go A, Bradley LH, Wei Y. De novo proteins from designed combinatorial libraries. Protein Science : a Publication of the Protein Society. 13: 1711-23. PMID 15215517 DOI: 10.1110/ps.04690804  0.88
2004 Wei Y, Hecht MH. Enzyme-like proteins from an unselected library of designed amino acid sequences. Protein Engineering, Design & Selection : Peds. 17: 67-75. PMID 14985539 DOI: 10.1093/protein/gzh007  0.88
2003 Wei Y, Kim S, Fela D, Baum J, Hecht MH. Solution structure of a de novo protein from a designed combinatorial library. Proceedings of the National Academy of Sciences of the United States of America. 100: 13270-3. PMID 14593201 DOI: 10.1073/pnas.1835644100  0.88
2003 Wei Y, Fela D, Kim S, Hecht M, Baum J. 1H, 13C and 15N resonance assignments of S-824, a de novo four-helix bundle from a designed combinatorial library. Journal of Biomolecular Nmr. 27: 395-6. PMID 14512738 DOI: 10.1023/A:1025842221022  0.88
2003 Wei Y, Liu T, Sazinsky SL, Moffet DA, Pelczer I, Hecht MH. Stably folded de novo proteins from a designed combinatorial library. Protein Science : a Publication of the Protein Society. 12: 92-102. PMID 12493832 DOI: 10.1110/ps.0228003  0.88
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