Gabriel J. Rocklin, Ph.D. - Publications

Affiliations: 
2007-2013 Biophysics University of California, San Francisco, San Francisco, CA 
 2013-2019 Biochemistry University of Washington, Seattle, Seattle, WA 
 2019- Pharmacology Northwestern University Feinberg School of Medicine, Chicago, IL, United States 
Area:
protein folding and stability
Website:
www.rocklinlab.org

10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Chevalier A, Silva DA, Rocklin GJ, Hicks DR, Vergara R, Murapa P, Bernard SM, Zhang L, Lam KH, Yao G, Bahl CD, Miyashita SI, Goreshnik I, Fuller JT, Koday MT, et al. Massively parallel de novo protein design for targeted therapeutics. Nature. PMID 28953867 DOI: 10.1038/nature23912  0.32
2017 Rocklin GJ, Chidyausiku TM, Goreshnik I, Ford A, Houliston S, Lemak A, Carter L, Ravichandran R, Mulligan VK, Chevalier A, Arrowsmith CH, Baker D. Global analysis of protein folding using massively parallel design, synthesis, and testing. Science (New York, N.Y.). 357: 168-175. PMID 28706065 DOI: 10.1126/science.aan0693  0.32
2016 Bhardwaj G, Mulligan VK, Bahl CD, Gilmore JM, Harvey PJ, Cheneval O, Buchko GW, Pulavarti SV, Kaas Q, Eletsky A, Huang PS, Johnsen WA, Greisen PJ, Rocklin GJ, Song Y, et al. Accurate de novo design of hyperstable constrained peptides. Nature. PMID 27626386 DOI: 10.1038/nature19791  0.44
2013 Rocklin GJ, Mobley DL, Dill KA, Hünenberger PH. Calculating the binding free energies of charged species based on explicit-solvent simulations employing lattice-sum methods: an accurate correction scheme for electrostatic finite-size effects. The Journal of Chemical Physics. 139: 184103. PMID 24320250 DOI: 10.1063/1.4826261  0.96
2013 Rocklin GJ, Mobley DL, Dill KA. Calculating the sensitivity and robustness of binding free energy calculations to force field parameters. Journal of Chemical Theory and Computation. 9: 3072-3083. PMID 24015114 DOI: 10.1021/ct400315q  0.96
2013 Rocklin GJ, Boyce SE, Fischer M, Fish I, Mobley DL, Shoichet BK, Dill KA. Blind prediction of charged ligand binding affinities in a model binding site. Journal of Molecular Biology. 425: 4569-83. PMID 23896298 DOI: 10.1016/j.jmb.2013.07.030  0.96
2013 Rocklin GJ, Mobley DL, Dill KA. Separated topologies--a method for relative binding free energy calculations using orientational restraints. The Journal of Chemical Physics. 138: 085104. PMID 23464180 DOI: 10.1063/1.4792251  0.96
2009 Boyce SE, Mobley DL, Rocklin GJ, Graves AP, Dill KA, Shoichet BK. Predicting ligand binding affinity with alchemical free energy methods in a polar model binding site. Journal of Molecular Biology. 394: 747-63. PMID 19782087 DOI: 10.1016/j.jmb.2009.09.049  0.96
2009 Teotico DG, Babaoglu K, Rocklin GJ, Ferreira RS, Giannetti AM, Shoichet BK. Docking for fragment inhibitors of AmpC beta-lactamase. Proceedings of the National Academy of Sciences of the United States of America. 106: 7455-60. PMID 19416920 DOI: 10.1073/pnas.0813029106  0.96
2006 DerMardirossian C, Rocklin G, Seo JY, Bokoch GM. Phosphorylation of RhoGDI by Src regulates Rho GTPase binding and cytosol-membrane cycling Molecular Biology of the Cell. 17: 4760-4768. PMID 16943322 DOI: 10.1091/mbc.E06-06-0533  0.96
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