Asher D. Cutter, Ph.D. - Publications

2004 University of Arizona, Tucson, AZ 
mutants of C. elegans

87 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Gilbert KJ, Zdraljevic S, Cook DE, Cutter AD, Andersen EC, Baer CF. The distribution of mutational effects on fitness in Caenorhabditis elegans inferred from standing genetic variation. Genetics. PMID 34791202 DOI: 10.1093/genetics/iyab166  0.466
2021 Sánchez-Ramírez S, Weiss JG, Thomas CG, Cutter AD. Widespread misregulation of inter-species hybrid transcriptomes due to sex-specific and sex-chromosome regulatory evolution. Plos Genetics. 17: e1009409. PMID 33667233 DOI: 10.1371/journal.pgen.1009409  0.384
2020 Cutter AD, Bundus JD. Speciation and the developmental alarm clock. Elife. 9. PMID 32902377 DOI: 10.7554/Elife.56276  0.527
2019 Cutter AD, Morran LT, Phillips PC. Males, Outcrossing, and Sexual Selection in Nematodes. Genetics. 213: 27-57. PMID 31488593 DOI: 10.1534/Genetics.119.300244  0.453
2019 Cutter AD. Reproductive transitions in plants and animals: selfing syndrome, sexual selection, and speciation. The New Phytologist. PMID 31336389 DOI: 10.1111/Nph.16075  0.387
2019 Mark S, Weiss J, Sharma E, Liu T, Wang W, Claycomb JM, Cutter AD. Genome structure predicts modular transcriptome responses to genetic and environmental conditions. Molecular Ecology. PMID 31325381 DOI: 10.1111/Mec.15185  0.449
2019 Stegeman GW, Medina D, Cutter AD, Ryu WS. Neuro-genetic plasticity of Caenorhabditis elegans behavioral thermal tolerance. Bmc Neuroscience. 20: 26. PMID 31182018 DOI: 10.1186/S12868-019-0510-Z  0.319
2019 Stegeman GW, Baird SE, Ryu WS, Cutter AD. Genetically Distinct Behavioral Modules Underlie Natural Variation in Thermal Performance Curves. G3 (Bethesda, Md.). PMID 31048400 DOI: 10.1534/G3.119.400043  0.375
2019 Cutter A. Decision letter: Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations Elife. DOI: 10.7554/Elife.50465.Sa1  0.389
2018 Ting JJ, Cutter AD. Demographic consequences of reproductive interference in multi-species communities. Bmc Ecology. 18: 46. PMID 30400870 DOI: 10.1186/S12898-018-0201-0  0.438
2018 Ting JJ, Tsai CN, Schalkowski R, Cutter AD. Genetic Contributions to Ectopic Sperm Cell Migration in Nematodes. G3 (Bethesda, Md.). PMID 30327379 DOI: 10.1534/G3.118.200785  0.5
2018 Bundus JD, Wang D, Cutter AD. Genetic basis to hybrid inviability is more complex than hybrid male sterility in Caenorhabditis nematodes. Heredity. PMID 29626207 DOI: 10.1038/S41437-018-0069-Y  0.465
2018 Yin D, Schwarz EM, Thomas CG, Felde RL, Korf IF, Cutter AD, Schartner CM, Ralston EJ, Meyer BJ, Haag ES. Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins. Science (New York, N.Y.). 359: 55-61. PMID 29302007 DOI: 10.1126/Science.Aao0827  0.488
2017 Ferrari C, Salle R, Callemeyn-Torre N, Jovelin R, Cutter AD, Braendle C. Ephemeral-habitat colonization and neotropical species richness of Caenorhabditis nematodes. Bmc Ecology. 17: 43. PMID 29258487 DOI: 10.1186/S12898-017-0150-Z  0.425
2017 Cutter AD. X exceptionalism in Caenorhabditis speciation. Molecular Ecology. PMID 29134711 DOI: 10.1111/Mec.14423  0.495
2016 Vielle A, Callemeyn-Torre N, Gimond C, Poullet N, Gray JC, Cutter AD, Braendle C. Convergent evolution of sperm gigantism and the developmental origins of sperm size variability in Caenorhabditis nematodes. Evolution; International Journal of Organic Evolution. PMID 27565121 DOI: 10.1111/Evo.13043  0.416
2016 Cutter AD, Gray JC. Ephemeral ecological speciation and the latitudinal biodiversity gradient. Evolution; International Journal of Organic Evolution. PMID 27502055 DOI: 10.1111/Evo.13030  0.467
2015 Cutter AD, Jovelin R. When natural selection gives gene function the cold shoulder. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 1169-73. PMID 26411745 DOI: 10.1002/Bies.201500083  0.466
2015 Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC. Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes. Plos Genetics. 11: e1005497. PMID 26394399 DOI: 10.1371/Journal.Pgen.1005497  0.421
2015 Cutter AD. Caenorhabditis evolution in the wild. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 983-95. PMID 26126900 DOI: 10.1002/Bies.201500053  0.485
2015 Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC. Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes. Plos Genetics. 11: e1005323. PMID 26114425 DOI: 10.1371/Journal.Pgen.1005323  0.535
2015 Bundus JD, Alaei R, Cutter AD. Gametic selection, developmental trajectories, and extrinsic heterogeneity in Haldane's rule. Evolution; International Journal of Organic Evolution. 69: 2005-17. PMID 26102479 DOI: 10.1111/Evo.12708  0.468
2015 Cutter AD. Repeatability, ephemerality and inconvenient truths in the speciation process. Molecular Ecology. 24: 1643-4. PMID 25850972 DOI: 10.1111/Mec.13163  0.549
2015 Thomas CG, Wang W, Jovelin R, Ghosh R, Lomasko T, Trinh Q, Kruglyak L, Stein LD, Cutter AD. Full-genome evolutionary histories of selfing, splitting, and selection in Caenorhabditis. Genome Research. 25: 667-78. PMID 25783854 DOI: 10.1101/Gr.187237.114  0.579
2015 Tu S, Wu MZ, Wang J, Cutter AD, Weng Z, Claycomb JM. Comparative functional characterization of the CSR-1 22G-RNA pathway in Caenorhabditis nematodes. Nucleic Acids Research. 43: 208-24. PMID 25510497 DOI: 10.1093/Nar/Gku1308  0.329
2014 Jovelin R, Cutter AD. Microevolution of nematode miRNAs reveals diverse modes of selection. Genome Biology and Evolution. 6: 3049-63. PMID 25355809 DOI: 10.1093/Gbe/Evu239  0.307
2014 Dey A, Jin Q, Chen YC, Cutter AD. Gonad morphogenesis defects drive hybrid male sterility in asymmetric hybrid breakdown of Caenorhabditis nematodes. Evolution & Development. 16: 362-72. PMID 25196892 DOI: 10.1111/Ede.12097  0.75
2014 Ting JJ, Woodruff GC, Leung G, Shin NR, Cutter AD, Haag ES. Intense sperm-mediated sexual conflict promotes reproductive isolation in Caenorhabditis nematodes. Plos Biology. 12: e1001915. PMID 25072732 DOI: 10.1371/Journal.Pbio.1001915  0.442
2014 Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, ... ... Cutter AD, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/Gr.159384.113  0.466
2014 Félix MA, Braendle C, Cutter AD. A streamlined system for species diagnosis in Caenorhabditis (Nematoda: Rhabditidae) with name designations for 15 distinct biological species. Plos One. 9: e94723. PMID 24727800 DOI: 10.1371/Journal.Pone.0094723  0.408
2014 Jovelin R, Comstock JS, Cutter AD, Phillips PC. A recent global selective sweep on the age-1 phosphatidylinositol 3-OH kinase regulator of the insulin-like signaling pathway within Caenorhabditis remanei. G3 (Bethesda, Md.). 4: 1123-33. PMID 24727287 DOI: 10.1534/G3.114.010629  0.447
2014 Gray JC, Cutter AD. Mainstreaming Caenorhabditis elegans in experimental evolution. Proceedings. Biological Sciences / the Royal Society. 281: 20133055. PMID 24430852 DOI: 10.1098/Rspb.2013.3055  0.428
2014 Li S, Jovelin R, Yoshiga T, Tanaka R, Cutter AD. Specialist versus generalist life histories and nucleotide diversity in Caenorhabditis nematodes. Proceedings. Biological Sciences / the Royal Society. 281: 20132858. PMID 24403340 DOI: 10.1098/Rspb.2013.2858  0.541
2013 Gimond C, Jovelin R, Han S, Ferrari C, Cutter AD, Braendle C. Outbreeding depression with low genetic variation in selfing Caenorhabditis nematodes. Evolution; International Journal of Organic Evolution. 67: 3087-101. PMID 24151995 DOI: 10.1111/Evo.12203  0.376
2013 Cutter AD. Integrating phylogenetics, phylogeography and population genetics through genomes and evolutionary theory. Molecular Phylogenetics and Evolution. 69: 1172-85. PMID 23800835 DOI: 10.1016/J.Ympev.2013.06.006  0.553
2013 Dey A, Chan CK, Thomas CG, Cutter AD. Molecular hyperdiversity defines populations of the nematode Caenorhabditis brenneri. Proceedings of the National Academy of Sciences of the United States of America. 110: 11056-60. PMID 23776215 DOI: 10.1073/Pnas.1303057110  0.786
2013 Jovelin R, Cutter AD. Fine-scale signatures of molecular evolution reconcile models of indel-associated mutation. Genome Biology and Evolution. 5: 978-86. PMID 23558593 DOI: 10.1093/Gbe/Evt051  0.438
2013 Cutter AD, Jovelin R, Dey A. Molecular hyperdiversity and evolution in very large populations. Molecular Ecology. 22: 2074-95. PMID 23506466 DOI: 10.1111/Mec.12281  0.782
2013 Cutter AD, Payseur BA. Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews. Genetics. 14: 262-74. PMID 23478346 DOI: 10.1038/Nrg3425  0.548
2013 Félix MA, Jovelin R, Ferrari C, Han S, Cho YR, Andersen EC, Cutter AD, Braendle C. Species richness, distribution and genetic diversity of Caenorhabditis nematodes in a remote tropical rainforest. Bmc Evolutionary Biology. 13: 10. PMID 23311925 DOI: 10.1186/1471-2148-13-10  0.475
2013 Stegeman GW, de Mesquita MB, Ryu WS, Cutter AD. Temperature-dependent behaviours are genetically variable in the nematode Caenorhabditis briggsae. The Journal of Experimental Biology. 216: 850-8. PMID 23155083 DOI: 10.1242/Jeb.075408  0.432
2012 Dey A, Jeon Y, Wang GX, Cutter AD. Global population genetic structure of Caenorhabditis remanei reveals incipient speciation. Genetics. 191: 1257-69. PMID 22649079 DOI: 10.1534/Genetics.112.140418  0.792
2012 Wyman MJ, Cutter AD, Rowe L. Gene duplication in the evolution of sexual dimorphism. Evolution; International Journal of Organic Evolution. 66: 1556-66. PMID 22519790 DOI: 10.1111/J.1558-5646.2011.01525.X  0.403
2012 Kozlowska JL, Ahmad AR, Jahesh E, Cutter AD. Genetic variation for postzygotic reproductive isolation between Caenorhabditis briggsae and Caenorhabditis sp. 9. Evolution; International Journal of Organic Evolution. 66: 1180-95. PMID 22486697 DOI: 10.1111/J.1558-5646.2011.01514.X  0.48
2012 Cutter AD, Wang GX, Ai H, Peng Y. Influence of finite-sites mutation, population subdivision and sampling schemes on patterns of nucleotide polymorphism for species with molecular hyperdiversity. Molecular Ecology. 21: 1345-59. PMID 22320847 DOI: 10.1111/J.1365-294X.2012.05475.X  0.392
2012 Cutter AD. The polymorphic prelude to Bateson-Dobzhansky-Muller incompatibilities. Trends in Ecology & Evolution. 27: 209-18. PMID 22154508 DOI: 10.1016/J.Tree.2011.11.004  0.455
2011 Jovelin R, Cutter AD. MicroRNA sequence variation potentially contributes to within-species functional divergence in the nematode Caenorhabditis briggsae. Genetics. 189: 967-76. PMID 21890738 DOI: 10.1534/Genetics.111.132795  0.451
2011 Murray RL, Cutter AD. Experimental evolution of sperm count in protandrous self-fertilizing hermaphrodites. The Journal of Experimental Biology. 214: 1740-7. PMID 21525321 DOI: 10.1242/Jeb.053181  0.392
2011 Murray RL, Kozlowska JL, Cutter AD. Heritable determinants of male fertilization success in the nematode Caenorhabditis elegans. Bmc Evolutionary Biology. 11: 99. PMID 21492473 DOI: 10.1186/1471-2148-11-99  0.388
2011 Cutter AD, Moses AM. Polymorphism, divergence, and the role of recombination in Saccharomyces cerevisiae genome evolution. Molecular Biology and Evolution. 28: 1745-54. PMID 21199893 DOI: 10.1093/Molbev/Msq356  0.525
2011 Prasad A, Croydon-Sugarman MJ, Murray RL, Cutter AD. Temperature-dependent fecundity associates with latitude in Caenorhabditis briggsae. Evolution; International Journal of Organic Evolution. 65: 52-63. PMID 20731713 DOI: 10.1111/J.1558-5646.2010.01110.X  0.369
2010 Wang GX, Ren S, Ren Y, Ai H, Cutter AD. Extremely high molecular diversity within the East Asian nematode Caenorhabditis sp. 5. Molecular Ecology. 19: 5022-9. PMID 20958820 DOI: 10.1111/J.1365-294X.2010.04862.X  0.58
2010 Cutter AD, Choi JY. Natural selection shapes nucleotide polymorphism across the genome of the nematode Caenorhabditis briggsae. Genome Research. 20: 1103-11. PMID 20508143 DOI: 10.1101/Gr.104331.109  0.569
2010 Cutter AD, Agrawal AF. The evolutionary dynamics of operon distributions in eukaryote genomes. Genetics. 185: 685-93. PMID 20382830 DOI: 10.1534/Genetics.110.115766  0.463
2010 Cutter AD. Molecular evolution inferences from the C. elegans genome. Wormbook : the Online Review of C. Elegans Biology. 1-14. PMID 20213859 DOI: 10.1895/Wormbook.1.149.1  0.534
2010 Cutter AD, Yan W, Tsvetkov N, Sunil S, Félix MA. Molecular population genetics and phenotypic sensitivity to ethanol for a globally diverse sample of the nematode Caenorhabditis briggsae. Molecular Ecology. 19: 798-809. PMID 20088888 DOI: 10.1111/J.1365-294X.2009.04491.X  0.539
2009 Cutter AD, Dey A, Murray RL. Evolution of the Caenorhabditis elegans genome. Molecular Biology and Evolution. 26: 1199-234. PMID 19289596 DOI: 10.1093/Molbev/Msp048  0.766
2009 Reinke V, Cutter AD. Germline expression influences operon organization in the Caenorhabditis elegans genome. Genetics. 181: 1219-28. PMID 19204375 DOI: 10.1534/Genetics.108.099283  0.367
2008 Cutter AD. Reproductive evolution: symptom of a selfing syndrome. Current Biology : Cb. 18: R1056-8. PMID 19036334 DOI: 10.1016/J.Cub.2008.09.008  0.418
2008 Dolgin ES, Charlesworth B, Cutter AD. Population frequencies of transposable elements in selfing and outcrossing Caenorhabditis nematodes. Genetics Research. 90: 317-29. PMID 18840306 DOI: 10.1017/S0016672308009440  0.467
2008 Loewe L, Cutter AD. On the potential for extinction by Muller's ratchet in Caenorhabditis elegans. Bmc Evolutionary Biology. 8: 125. PMID 18447910 DOI: 10.1186/1471-2148-8-125  0.414
2008 Cutter AD, Wasmuth JD, Washington NL. Patterns of molecular evolution in Caenorhabditis preclude ancient origins of selfing. Genetics. 178: 2093-104. PMID 18430935 DOI: 10.1534/Genetics.107.085787  0.741
2008 Cutter AD. Multilocus patterns of polymorphism and selection across the X chromosome of Caenorhabditis remanei. Genetics. 178: 1661-72. PMID 18245859 DOI: 10.1534/Genetics.107.085803  0.515
2008 Cutter AD. Divergence times in Caenorhabditis and Drosophila inferred from direct estimates of the neutral mutation rate. Molecular Biology and Evolution. 25: 778-86. PMID 18234705 DOI: 10.1093/Molbev/Msn024  0.495
2008 Dolgin ES, Félix MA, Cutter AD. Hakuna Nematoda: genetic and phenotypic diversity in African isolates of Caenorhabditis elegans and C. briggsae. Heredity. 100: 304-15. PMID 18073782 DOI: 10.1038/sj.hdy.6801079  0.354
2007 Dolgin ES, Charlesworth B, Baird SE, Cutter AD. Inbreeding and outbreeding depression in Caenorhabditis nematodes. Evolution; International Journal of Organic Evolution. 61: 1339-52. PMID 17542844 DOI: 10.1111/J.1558-5646.2007.00118.X  0.404
2007 LaMunyon CW, Bouban O, Cutter AD. Postcopulatory sexual selection reduces genetic diversity in experimental populations of Caenorhabditis elegans. The Journal of Heredity. 98: 67-72. PMID 17150980 DOI: 10.1093/jhered/esl052  0.375
2007 Royer DL, Sack L, Wilf P, Lusk CH, Jordan GJ, Niinemets U, Wright IJ, Westoby M, Cariglino B, Coley PD, Cutter AD, Johnson KR, Labandeira CC, Moles AT, Palmer MB, et al. Fossil leaf economics quantified: Calibration, Eocene case study, and implications Paleobiology. 33: 574-589. DOI: 10.1666/07001.1  0.341
2006 Cutter AD, Charlesworth B. Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remanei. Current Biology : Cb. 16: 2053-7. PMID 17055986 DOI: 10.1016/J.Cub.2006.08.067  0.395
2006 Cutter AD, Baird SE, Charlesworth D. High nucleotide polymorphism and rapid decay of linkage disequilibrium in wild populations of Caenorhabditis remanei Genetics. 174: 901-913. PMID 16951062 DOI: 10.1534/Genetics.106.061879  0.542
2006 Cutter AD, Wasmuth JD, Blaxter ML. The evolution of biased codon and amino acid usage in nematode genomes. Molecular Biology and Evolution. 23: 2303-15. PMID 16936139 DOI: 10.1093/Molbev/Msl097  0.481
2006 Payseur BA, Cutter AD. Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics : Tig. 22: 424-9. PMID 16806567 DOI: 10.1016/J.Tig.2006.06.009  0.333
2006 Cutter AD, Félix MA, Barrière A, Charlesworth D. Patterns of nucleotide polymorphism distinguish temperate and tropical wild isolates of Caenorhabditis briggsae Genetics. 173: 2021-2031. PMID 16783011 DOI: 10.1534/Genetics.106.058651  0.503
2006 Cutter AD. Nucleotide polymorphism and linkage disequilibrium in wild populations of the partial selfer Caenorhabditis elegans. Genetics. 172: 171-84. PMID 16272415 DOI: 10.1534/Genetics.105.048207  0.54
2005 Cutter AD, Good JM, Pappas CT, Saunders MA, Starrett DM, Wheeler TJ. Transposable element orientation bias in the Drosophila melanogaster genome. Journal of Molecular Evolution. 61: 733-41. PMID 16315105 DOI: 10.1007/S00239-004-0243-0  0.365
2005 Cutter AD. Mutation and the experimental evolution of outcrossing in Caenorhabditis elegans. Journal of Evolutionary Biology. 18: 27-34. PMID 15669958 DOI: 10.1111/J.1420-9101.2004.00804.X  0.392
2005 Cutter AD, Ward S. Sexual and temporal dynamics of molecular evolution in C. elegans development. Molecular Biology and Evolution. 22: 178-88. PMID 15371532 DOI: 10.1093/Molbev/Msh267  0.563
2004 Miller MA, Cutter AD, Yamamoto I, Ward S, Greenstein D. Clustered organization of reproductive genes in the C. elegans genome. Current Biology : Cb. 14: 1284-90. PMID 15268860 DOI: 10.1016/J.Cub.2004.07.025  0.613
2004 Cutter AD. Sperm-limited fecundity in nematodes: how many sperm are enough? Evolution; International Journal of Organic Evolution. 58: 651-5. PMID 15119448 DOI: 10.1111/J.0014-3820.2004.Tb01687.X  0.432
2003 Cutter AD, Payseur BA, Salcedo T, Estes AM, Good JM, Wood E, Hartl T, Maughan H, Strempel J, Wang B, Bryan AC, Dellos M. Molecular correlates of genes exhibiting RNAi phenotypes in Caenorhabditis elegans. Genome Research. 13: 2651-7. PMID 14656969 DOI: 10.1101/Gr.1659203  0.447
2003 Cutter AD, Payseur BA. Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Journal of Evolutionary Biology. 16: 812-22. PMID 14635896 DOI: 10.1046/J.1420-9101.2003.00596.X  0.39
2003 Cutter AD, Avilés L, Ward S. The proximate determinants of sex ratio in C. elegans populations. Genetical Research. 81: 91-102. PMID 12872911 DOI: 10.1017/S001667230300613X  0.601
2003 Cutter AD, Payseur BA. Selection at linked sites in the partial selfer Caenorhabditis elegans. Molecular Biology and Evolution. 20: 665-73. PMID 12679551 DOI: 10.1093/Molbev/Msg072  0.492
2002 Avilés L, Abbot P, Cutter AD. Population ecology, nonlinear dynamics, and social evolution. I. Associations among nonrelatives. The American Naturalist. 159: 115-27. PMID 18707408 DOI: 10.1086/324792  0.377
2002 Payseur BA, Cutter AD, Nachman MW. Searching for evidence of positive selection in the human genome using patterns of microsatellite variability. Molecular Biology and Evolution. 19: 1143-53. PMID 12082133 DOI: 10.1093/Oxfordjournals.Molbev.A004172  0.455
2000 Aviles L, McCormack J, Cutter A, Bukowski T. Precise, highly female-biased sex ratios in a social spider Proceedings of the Royal Society B: Biological Sciences. 267: 1445-1449. PMID 10983829 DOI: 10.1098/Rspb.2000.1162  0.353
1998 King JR, Andersen AN, Cutter AD. Ants as bioindicators of habitat disturbance: Validation of the functional group model for Australia's humid tropics Biodiversity and Conservation. 7: 1627-1638. DOI: 10.1023/A:1008857214743  0.3
Show low-probability matches.