Asher D. Cutter, Ph.D. - Publications

2004 University of Arizona, Tucson, AZ 
mutants of C. elegans

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Sánchez-Ramírez S, Weiss JG, Thomas CG, Cutter AD. Widespread misregulation of inter-species hybrid transcriptomes due to sex-specific and sex-chromosome regulatory evolution. Plos Genetics. 17: e1009409. PMID 33667233 DOI: 10.1371/journal.pgen.1009409  0.4
2018 Yin D, Schwarz EM, Thomas CG, Felde RL, Korf IF, Cutter AD, Schartner CM, Ralston EJ, Meyer BJ, Haag ES. Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins. Science (New York, N.Y.). 359: 55-61. PMID 29302007 DOI: 10.1126/Science.Aao0827  0.4
2017 Ferrari C, Salle R, Callemeyn-Torre N, Jovelin R, Cutter AD, Braendle C. Ephemeral-habitat colonization and neotropical species richness of Caenorhabditis nematodes. Bmc Ecology. 17: 43. PMID 29258487 DOI: 10.1186/S12898-017-0150-Z  0.56
2016 Jovelin R, Cutter AD. Hitting two birds with one stone: The unforeseen consequences of nested gene knockouts in Caenorhabditis elegans. Worm. 5: e1156835. PMID 27386165 DOI: 10.1080/21624054.2016.1156835  0.56
2015 Cutter AD, Jovelin R. When natural selection gives gene function the cold shoulder. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 1169-73. PMID 26411745 DOI: 10.1002/Bies.201500083  0.56
2015 Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC. Correction: Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes. Plos Genetics. 11: e1005497. PMID 26394399 DOI: 10.1371/Journal.Pgen.1005497  0.4
2015 Cutter AD. Caenorhabditis evolution in the wild. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 37: 983-95. PMID 26126900 DOI: 10.1002/Bies.201500053  0.56
2015 Fierst JL, Willis JH, Thomas CG, Wang W, Reynolds RM, Ahearne TE, Cutter AD, Phillips PC. Reproductive Mode and the Evolution of Genome Size and Structure in Caenorhabditis Nematodes. Plos Genetics. 11: e1005323. PMID 26114425 DOI: 10.1371/Journal.Pgen.1005323  0.56
2015 Bundus JD, Alaei R, Cutter AD. Gametic selection, developmental trajectories, and extrinsic heterogeneity in Haldane's rule. Evolution; International Journal of Organic Evolution. 69: 2005-17. PMID 26102479 DOI: 10.1111/Evo.12708  0.56
2015 Cutter AD. Repeatability, ephemerality and inconvenient truths in the speciation process. Molecular Ecology. 24: 1643-4. PMID 25850972 DOI: 10.1111/Mec.13163  0.56
2015 Thomas CG, Wang W, Jovelin R, Ghosh R, Lomasko T, Trinh Q, Kruglyak L, Stein LD, Cutter AD. Full-genome evolutionary histories of selfing, splitting, and selection in Caenorhabditis. Genome Research. 25: 667-78. PMID 25783854 DOI: 10.1101/Gr.187237.114  0.56
2015 Tu S, Wu MZ, Wang J, Cutter AD, Weng Z, Claycomb JM. Comparative functional characterization of the CSR-1 22G-RNA pathway in Caenorhabditis nematodes. Nucleic Acids Research. 43: 208-24. PMID 25510497 DOI: 10.1093/Nar/Gku1308  0.56
2014 Jovelin R, Cutter AD. Microevolution of nematode miRNAs reveals diverse modes of selection. Genome Biology and Evolution. 6: 3049-63. PMID 25355809 DOI: 10.1093/Gbe/Evu239  0.56
2014 Dey A, Jin Q, Chen YC, Cutter AD. Gonad morphogenesis defects drive hybrid male sterility in asymmetric hybrid breakdown of Caenorhabditis nematodes. Evolution & Development. 16: 362-72. PMID 25196892 DOI: 10.1111/Ede.12097  0.56
2014 Félix MA, Braendle C, Cutter AD. A streamlined system for species diagnosis in Caenorhabditis (Nematoda: Rhabditidae) with name designations for 15 distinct biological species. Plos One. 9: e94723. PMID 24727800 DOI: 10.1371/Journal.Pone.0094723  0.56
2014 Jovelin R, Comstock JS, Cutter AD, Phillips PC. A recent global selective sweep on the age-1 phosphatidylinositol 3-OH kinase regulator of the insulin-like signaling pathway within Caenorhabditis remanei. G3 (Bethesda, Md.). 4: 1123-33. PMID 24727287 DOI: 10.1534/G3.114.010629  0.56
2014 Gray JC, Cutter AD. Mainstreaming Caenorhabditis elegans in experimental evolution. Proceedings. Biological Sciences / the Royal Society. 281: 20133055. PMID 24430852 DOI: 10.1098/Rspb.2013.3055  0.56
2014 Li S, Jovelin R, Yoshiga T, Tanaka R, Cutter AD. Specialist versus generalist life histories and nucleotide diversity in Caenorhabditis nematodes. Proceedings. Biological Sciences / the Royal Society. 281: 20132858. PMID 24403340 DOI: 10.1098/Rspb.2013.2858  0.56
2013 Gimond C, Jovelin R, Han S, Ferrari C, Cutter AD, Braendle C. Outbreeding depression with low genetic variation in selfing Caenorhabditis nematodes. Evolution; International Journal of Organic Evolution. 67: 3087-101. PMID 24151995 DOI: 10.1111/Evo.12203  0.56
2013 Cutter AD. Integrating phylogenetics, phylogeography and population genetics through genomes and evolutionary theory. Molecular Phylogenetics and Evolution. 69: 1172-85. PMID 23800835 DOI: 10.1016/J.Ympev.2013.06.006  0.56
2013 Dey A, Chan CK, Thomas CG, Cutter AD. Molecular hyperdiversity defines populations of the nematode Caenorhabditis brenneri. Proceedings of the National Academy of Sciences of the United States of America. 110: 11056-60. PMID 23776215 DOI: 10.1073/Pnas.1303057110  0.56
2013 Jovelin R, Cutter AD. Fine-scale signatures of molecular evolution reconcile models of indel-associated mutation. Genome Biology and Evolution. 5: 978-86. PMID 23558593 DOI: 10.1093/Gbe/Evt051  0.56
2013 Cutter AD, Jovelin R, Dey A. Molecular hyperdiversity and evolution in very large populations. Molecular Ecology. 22: 2074-95. PMID 23506466 DOI: 10.1111/Mec.12281  0.56
2013 Cutter AD, Payseur BA. Genomic signatures of selection at linked sites: unifying the disparity among species. Nature Reviews. Genetics. 14: 262-74. PMID 23478346 DOI: 10.1038/Nrg3425  0.56
2013 Félix MA, Jovelin R, Ferrari C, Han S, Cho YR, Andersen EC, Cutter AD, Braendle C. Species richness, distribution and genetic diversity of Caenorhabditis nematodes in a remote tropical rainforest. Bmc Evolutionary Biology. 13: 10. PMID 23311925 DOI: 10.1186/1471-2148-13-10  0.56
2013 Stegeman GW, de Mesquita MB, Ryu WS, Cutter AD. Temperature-dependent behaviours are genetically variable in the nematode Caenorhabditis briggsae. The Journal of Experimental Biology. 216: 850-8. PMID 23155083 DOI: 10.1242/Jeb.075408  0.56
2012 Dey A, Jeon Y, Wang GX, Cutter AD. Global population genetic structure of Caenorhabditis remanei reveals incipient speciation. Genetics. 191: 1257-69. PMID 22649079 DOI: 10.1534/Genetics.112.140418  0.56
2012 Wyman MJ, Cutter AD, Rowe L. Gene duplication in the evolution of sexual dimorphism. Evolution; International Journal of Organic Evolution. 66: 1556-66. PMID 22519790 DOI: 10.1111/J.1558-5646.2011.01525.X  0.56
2012 Kozlowska JL, Ahmad AR, Jahesh E, Cutter AD. Genetic variation for postzygotic reproductive isolation between Caenorhabditis briggsae and Caenorhabditis sp. 9. Evolution; International Journal of Organic Evolution. 66: 1180-95. PMID 22486697 DOI: 10.1111/J.1558-5646.2011.01514.X  0.56
2012 Cutter AD, Wang GX, Ai H, Peng Y. Influence of finite-sites mutation, population subdivision and sampling schemes on patterns of nucleotide polymorphism for species with molecular hyperdiversity. Molecular Ecology. 21: 1345-59. PMID 22320847 DOI: 10.1111/J.1365-294X.2012.05475.X  0.56
2012 Cutter AD. The polymorphic prelude to Bateson-Dobzhansky-Muller incompatibilities. Trends in Ecology & Evolution. 27: 209-18. PMID 22154508 DOI: 10.1016/J.Tree.2011.11.004  0.56
2011 Jovelin R, Cutter AD. MicroRNA sequence variation potentially contributes to within-species functional divergence in the nematode Caenorhabditis briggsae. Genetics. 189: 967-76. PMID 21890738 DOI: 10.1534/Genetics.111.132795  0.56
2011 Murray RL, Cutter AD. Experimental evolution of sperm count in protandrous self-fertilizing hermaphrodites. The Journal of Experimental Biology. 214: 1740-7. PMID 21525321 DOI: 10.1242/Jeb.053181  0.56
2011 Murray RL, Kozlowska JL, Cutter AD. Heritable determinants of male fertilization success in the nematode Caenorhabditis elegans. Bmc Evolutionary Biology. 11: 99. PMID 21492473 DOI: 10.1186/1471-2148-11-99  0.56
2011 Cutter AD, Moses AM. Polymorphism, divergence, and the role of recombination in Saccharomyces cerevisiae genome evolution. Molecular Biology and Evolution. 28: 1745-54. PMID 21199893 DOI: 10.1093/Molbev/Msq356  0.56
2011 Prasad A, Croydon-Sugarman MJ, Murray RL, Cutter AD. Temperature-dependent fecundity associates with latitude in Caenorhabditis briggsae. Evolution; International Journal of Organic Evolution. 65: 52-63. PMID 20731713 DOI: 10.1111/J.1558-5646.2010.01110.X  0.56
2010 Wang GX, Ren S, Ren Y, Ai H, Cutter AD. Extremely high molecular diversity within the East Asian nematode Caenorhabditis sp. 5. Molecular Ecology. 19: 5022-9. PMID 20958820 DOI: 10.1111/J.1365-294X.2010.04862.X  0.56
2010 Cutter AD, Choi JY. Natural selection shapes nucleotide polymorphism across the genome of the nematode Caenorhabditis briggsae. Genome Research. 20: 1103-11. PMID 20508143 DOI: 10.1101/Gr.104331.109  0.56
2010 Cutter AD, Agrawal AF. The evolutionary dynamics of operon distributions in eukaryote genomes. Genetics. 185: 685-93. PMID 20382830 DOI: 10.1534/Genetics.110.115766  0.56
2010 Cutter AD. Molecular evolution inferences from the C. elegans genome. Wormbook : the Online Review of C. Elegans Biology. 1-14. PMID 20213859 DOI: 10.1895/Wormbook.1.149.1  0.56
2010 Cutter AD, Yan W, Tsvetkov N, Sunil S, Félix MA. Molecular population genetics and phenotypic sensitivity to ethanol for a globally diverse sample of the nematode Caenorhabditis briggsae. Molecular Ecology. 19: 798-809. PMID 20088888 DOI: 10.1111/J.1365-294X.2009.04491.X  0.56
2009 Cutter AD, Dey A, Murray RL. Evolution of the Caenorhabditis elegans genome. Molecular Biology and Evolution. 26: 1199-234. PMID 19289596 DOI: 10.1093/Molbev/Msp048  0.56
2009 Reinke V, Cutter AD. Germline expression influences operon organization in the Caenorhabditis elegans genome. Genetics. 181: 1219-28. PMID 19204375 DOI: 10.1534/Genetics.108.099283  0.56
2008 Cutter AD. Reproductive evolution: symptom of a selfing syndrome. Current Biology : Cb. 18: R1056-8. PMID 19036334 DOI: 10.1016/J.Cub.2008.09.008  0.56
2008 Dolgin ES, Charlesworth B, Cutter AD. Population frequencies of transposable elements in selfing and outcrossing Caenorhabditis nematodes. Genetics Research. 90: 317-29. PMID 18840306 DOI: 10.1017/S0016672308009440  0.56
2008 Loewe L, Cutter AD. On the potential for extinction by Muller's ratchet in Caenorhabditis elegans. Bmc Evolutionary Biology. 8: 125. PMID 18447910 DOI: 10.1186/1471-2148-8-125  0.56
2008 Cutter AD, Wasmuth JD, Washington NL. Patterns of molecular evolution in Caenorhabditis preclude ancient origins of selfing. Genetics. 178: 2093-104. PMID 18430935 DOI: 10.1534/Genetics.107.085787  0.56
2008 Cutter AD. Multilocus patterns of polymorphism and selection across the X chromosome of Caenorhabditis remanei. Genetics. 178: 1661-72. PMID 18245859 DOI: 10.1534/Genetics.107.085803  0.56
2008 Cutter AD. Divergence times in Caenorhabditis and Drosophila inferred from direct estimates of the neutral mutation rate. Molecular Biology and Evolution. 25: 778-86. PMID 18234705 DOI: 10.1093/Molbev/Msn024  0.56
2008 Dolgin ES, Félix MA, Cutter AD. Hakuna Nematoda: genetic and phenotypic diversity in African isolates of Caenorhabditis elegans and C. briggsae. Heredity. 100: 304-15. PMID 18073782 DOI: 10.1038/sj.hdy.6801079  0.56
2007 Dolgin ES, Charlesworth B, Baird SE, Cutter AD. Inbreeding and outbreeding depression in Caenorhabditis nematodes. Evolution; International Journal of Organic Evolution. 61: 1339-52. PMID 17542844 DOI: 10.1111/J.1558-5646.2007.00118.X  0.56
2007 LaMunyon CW, Bouban O, Cutter AD. Postcopulatory sexual selection reduces genetic diversity in experimental populations of Caenorhabditis elegans. The Journal of Heredity. 98: 67-72. PMID 17150980 DOI: 10.1093/jhered/esl052  0.56
2007 Royer DL, Sack L, Wilf P, Lusk CH, Jordan GJ, Niinemets U, Wright IJ, Westoby M, Cariglino B, Coley PD, Cutter AD, Johnson KR, Labandeira CC, Moles AT, Palmer MB, et al. Fossil leaf economics quantified: Calibration, Eocene case study, and implications Paleobiology. 33: 574-589. DOI: 10.1666/07001.1  0.56
2006 Cutter AD, Charlesworth B. Selection intensity on preferred codons correlates with overall codon usage bias in Caenorhabditis remanei. Current Biology : Cb. 16: 2053-7. PMID 17055986 DOI: 10.1016/J.Cub.2006.08.067  0.56
2006 Cutter AD, Baird SE, Charlesworth D. High nucleotide polymorphism and rapid decay of linkage disequilibrium in wild populations of Caenorhabditis remanei Genetics. 174: 901-913. PMID 16951062 DOI: 10.1534/Genetics.106.061879  0.56
2006 Cutter AD, Wasmuth JD, Blaxter ML. The evolution of biased codon and amino acid usage in nematode genomes. Molecular Biology and Evolution. 23: 2303-15. PMID 16936139 DOI: 10.1093/Molbev/Msl097  0.56
2006 Payseur BA, Cutter AD. Integrating patterns of polymorphism at SNPs and STRs. Trends in Genetics : Tig. 22: 424-9. PMID 16806567 DOI: 10.1016/J.Tig.2006.06.009  0.56
2006 Cutter AD, Félix MA, Barrière A, Charlesworth D. Patterns of nucleotide polymorphism distinguish temperate and tropical wild isolates of Caenorhabditis briggsae Genetics. 173: 2021-2031. PMID 16783011 DOI: 10.1534/Genetics.106.058651  0.56
2006 Cutter AD. Nucleotide polymorphism and linkage disequilibrium in wild populations of the partial selfer Caenorhabditis elegans. Genetics. 172: 171-84. PMID 16272415 DOI: 10.1534/Genetics.105.048207  0.56
2005 Cutter AD, Good JM, Pappas CT, Saunders MA, Starrett DM, Wheeler TJ. Transposable element orientation bias in the Drosophila melanogaster genome. Journal of Molecular Evolution. 61: 733-41. PMID 16315105 DOI: 10.1007/S00239-004-0243-0  0.56
2005 Cutter AD. Mutation and the experimental evolution of outcrossing in Caenorhabditis elegans. Journal of Evolutionary Biology. 18: 27-34. PMID 15669958 DOI: 10.1111/J.1420-9101.2004.00804.X  0.56
2005 Cutter AD, Ward S. Sexual and temporal dynamics of molecular evolution in C. elegans development. Molecular Biology and Evolution. 22: 178-88. PMID 15371532 DOI: 10.1093/Molbev/Msh267  0.92
2004 Avilés L, Fletcher JA, Cutter AD. The kin composition of social groups: trading group size for degree of altruism. The American Naturalist. 164: 132-44. PMID 15278839 DOI: 10.1086/422263  0.56
2004 Miller MA, Cutter AD, Yamamoto I, Ward S, Greenstein D. Clustered organization of reproductive genes in the C. elegans genome. Current Biology : Cb. 14: 1284-90. PMID 15268860 DOI: 10.1016/J.Cub.2004.07.025  0.56
2004 Cutter AD. Sperm-limited fecundity in nematodes: how many sperm are enough? Evolution; International Journal of Organic Evolution. 58: 651-5. PMID 15119448 DOI: 10.1111/J.0014-3820.2004.Tb01687.X  0.56
2003 Cutter AD, Payseur BA, Salcedo T, Estes AM, Good JM, Wood E, Hartl T, Maughan H, Strempel J, Wang B, Bryan AC, Dellos M. Molecular correlates of genes exhibiting RNAi phenotypes in Caenorhabditis elegans. Genome Research. 13: 2651-7. PMID 14656969 DOI: 10.1101/Gr.1659203  0.56
2003 Cutter AD, Payseur BA. Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Journal of Evolutionary Biology. 16: 812-22. PMID 14635896 DOI: 10.1046/J.1420-9101.2003.00596.X  0.56
2003 Cutter AD, Avilés L, Ward S. The proximate determinants of sex ratio in C. elegans populations. Genetical Research. 81: 91-102. PMID 12872911 DOI: 10.1017/S001667230300613X  0.56
2003 Cutter AD, Payseur BA. Selection at linked sites in the partial selfer Caenorhabditis elegans. Molecular Biology and Evolution. 20: 665-73. PMID 12679551 DOI: 10.1093/Molbev/Msg072  0.56
2002 Avilés L, Abbot P, Cutter AD. Population ecology, nonlinear dynamics, and social evolution. I. Associations among nonrelatives. The American Naturalist. 159: 115-27. PMID 18707408 DOI: 10.1086/324792  0.56
2002 Payseur BA, Cutter AD, Nachman MW. Searching for evidence of positive selection in the human genome using patterns of microsatellite variability. Molecular Biology and Evolution. 19: 1143-53. PMID 12082133 DOI: 10.1093/Oxfordjournals.Molbev.A004172  0.56
2001 Wilf P, Labandeira CC, Johnson KR, Coley PD, Cutter AD. Insect herbivory, plant defense, and early Cenozoic climate change. Proceedings of the National Academy of Sciences of the United States of America. 98: 6221-6. PMID 11353840 DOI: 10.1073/Pnas.111069498  0.56
2000 Aviles L, McCormack J, Cutter A, Bukowski T. Precise, highly female-biased sex ratios in a social spider Proceedings of the Royal Society B: Biological Sciences. 267: 1445-1449. PMID 10983829 DOI: 10.1098/Rspb.2000.1162  0.56
1998 King JR, Andersen AN, Cutter AD. Ants as bioindicators of habitat disturbance: Validation of the functional group model for Australia's humid tropics Biodiversity and Conservation. 7: 1627-1638. DOI: 10.1023/A:1008857214743  0.56
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