Ke Xia, Ph.D. - Publications

Affiliations: 
2009 Rensselaer Polytechnic Institute, Troy, NY, United States 
Area:
Protein Folding/Misfolding

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Kaur G, Song Y, Xia K, McCarthy K, Zhang F, Linhardt RJ, Harris NR. Effect of high glucose on glycosaminoglycans in cultured retinal endothelial cells and rat retina. Glycobiology. PMID 35552402 DOI: 10.1093/glycob/cwac029  0.321
2022 Kim SB, Zoepfl M, Samanta P, Zhang F, Xia K, Thara R, Linhardt RJ, Doerksen RJ, McVoy MA, Pomin VH. Fractionation of sulfated galactan from the red alga Botryocladia occidentalis separates its anticoagulant and anti-SARS-CoV-2 properties. The Journal of Biological Chemistry. 101856. PMID 35337800 DOI: 10.1016/j.jbc.2022.101856  0.601
2022 Ahat E, Song Y, Xia K, Reid W, Li J, Bui S, Zhang F, Linhardt RJ, Wang Y. GRASP depletion-mediated Golgi fragmentation impairs glycosaminoglycan synthesis, sulfation, and secretion. Cellular and Molecular Life Sciences : Cmls. 79: 199. PMID 35312866 DOI: 10.1007/s00018-022-04223-3  0.534
2022 Yu Y, Fu L, He P, Xia K, Varghese S, Wang H, Zhang F, Dordick J, Linhardt RJ. Chemobiocatalytic Synthesis of a Low-Molecular-Weight Heparin. Acs Chemical Biology. PMID 35201757 DOI: 10.1021/acschembio.1c00928  0.733
2021 Ning Z, Lang K, Xia K, Linhardt RJ, Gross RA. Lipase-Catalyzed Synthesis and Characterization of Poly(glycerol sebacate). Biomacromolecules. PMID 34936341 DOI: 10.1021/acs.biomac.1c01351  0.769
2021 Yan L, Song Y, Xia K, He P, Zhang F, Chen S, Pouliot R, Weiss DJ, Tandon R, Bates JT, Ederer DR, Mitra D, Sharma P, Davis A, Linhardt RJ. Heparan sulfates from bat and human lung and their binding to the spike protein of SARS-CoV-2 virus. Carbohydrate Polymers. 260: 117797. PMID 33712145 DOI: 10.1016/j.carbpol.2021.117797  0.524
2021 Xia K, Hagan JT, Fu L, Sheetz BS, Bhattacharya S, Zhang F, Dwyer JR, Linhardt RJ. Synthetic heparan sulfate standards and machine learning facilitate the development of solid-state nanopore analysis. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33688052 DOI: 10.1073/pnas.2022806118  0.594
2021 Badri A, Williams A, Awofiranye A, Datta P, Xia K, He W, Fraser K, Dordick JS, Linhardt RJ, Koffas MAG. Complete biosynthesis of a sulfated chondroitin in Escherichia coli. Nature Communications. 12: 1389. PMID 33654100 DOI: 10.1038/s41467-021-21692-5  0.656
2021 Baytas SN, Varghese SS, Jin W, Yu Y, He P, Douaisi M, Zhang F, Brodfuehrer P, Xia K, Dordick JS, Linhardt RJ. Preparation of Low Molecular Weight Heparin from a Remodeled Bovine Intestinal Heparin. Journal of Medicinal Chemistry. PMID 33586962 DOI: 10.1021/acs.jmedchem.0c02019  0.767
2021 Garrudo FFF, Mikael PE, Xia K, Silva JC, Ouyang Y, Chapman CA, Hoffman PR, Yu Y, Han X, Rodrigues CAV, Cabral JMS, Morgado J, Ferreira FC, Linhardt RJ. The effect of electrospun scaffolds on the glycosaminoglycan profile of differentiating neural stem cells. Biochimie. PMID 33422570 DOI: 10.1016/j.biochi.2021.01.001  0.769
2020 Yan L, Fu L, Xia K, Chen S, Zhang F, Dordick JS, Linhardt RJ. A Revised Structure for the Glycolipid Terminus of K5 Heparosan Capsular Polysaccharide. Biomolecules. 10. PMID 33171953 DOI: 10.3390/biom10111516  0.584
2020 Qiao M, Lin L, Xia K, Li J, Zhang X, Linhardt RJ. Recent advances in biotechnology for heparin and heparan sulfate analysis. Talanta. 219: 121270. PMID 32887160 DOI: 10.1016/J.Talanta.2020.121270  0.676
2020 Awofiranye AE, Baytas SN, Xia K, Badri A, He W, Varki A, Koffas M, Linhardt RJ. N-glycolyl chondroitin synthesis using metabolically engineered E. coli. Amb Express. 10: 144. PMID 32803432 DOI: 10.1186/S13568-020-01084-6  0.768
2020 Li J, Sparkenbaugh EM, Su G, Zhang F, Xu Y, Xia K, He P, Baytas S, Pechauer S, Padmanabhan A, Linhardt RJ, Pawlinski R, Liu J. Enzymatic Synthesis of Chondroitin Sulfate E to Attenuate Bacteria Lipopolysaccharide-Induced Organ Damage. Acs Central Science. 6: 1199-1207. PMID 32724854 DOI: 10.1021/Acscentsci.0C00712  0.757
2020 Bhattacharyya S, Feferman L, Han X, Xia K, Zhang F, Linhardt RJ, Tobacman JK. Increased CHST15 follows decline in arylsulfatase B (ARSB) and disinhibition of non-canonical WNT signaling: potential impact on epithelial and mesenchymal identity. Oncotarget. 11: 2327-2344. PMID 32595831 DOI: 10.18632/Oncotarget.27634  0.556
2020 Vaidyanathan D, Xia K, Yu Y, Linhardt RJ, Dordick JS. Polysaccharide Sequence Influences the Specificity and Catalytic Activity of Glucuronyl C5-Epimerase. Biochemistry. PMID 32579846 DOI: 10.1021/Acs.Biochem.0C00419  0.637
2020 Jin W, Jiang D, Zhang W, Wang C, Xia K, Zhang F, Linhardt RJ. Interactions of fibroblast growth factors with sulfated galactofucan from Saccharina japonica. International Journal of Biological Macromolecules. PMID 32464202 DOI: 10.1016/J.Ijbiomac.2020.05.183  0.582
2020 Yan L, Xia K, Yu Y, Miliakos A, Chaturvedi S, Zhang F, Chen S, Chaturvedi V, Linhardt RJ. Unique cell surface mannan of yeast pathogen Candida auris with selective binding to IgG. Acs Infectious Diseases. PMID 32233507 DOI: 10.1021/Acsinfecdis.9B00450  0.706
2020 Silva JC, Carvalho MS, Xia K, Cabral JMS, da Silva CL, Ferreira FC, Vashishth D, Linhardt RJ. Glycosaminoglycan disaccharide compositional analysis of cell-derived extracellular matrices using liquid chromatography-tandem mass spectrometry. Methods in Cell Biology. 156: 85-106. PMID 32222228 DOI: 10.1016/Bs.Mcb.2019.11.017  0.64
2020 Arnold K, Xu Y, Sparkenbaugh EM, Li M, Han X, Zhang X, Xia K, Piegore M, Zhang F, Zhang X, Henderson M, Pagadala V, Su G, Tan L, Park PW, et al. Design of anti-inflammatory heparan sulfate to protect against acetaminophen-induced acute liver failure. Science Translational Medicine. 12. PMID 32188725 DOI: 10.1126/Scitranslmed.Aav8075  0.645
2020 Silva JC, Han X, Silva TP, Xia K, Mikael PE, Cabral JMS, Ferreira FC, Linhardt RJ. Glycosaminoglycan remodeling during chondrogenic differentiation of human bone marrow-/synovial-derived mesenchymal stem/stromal cells under normoxia and hypoxia. Glycoconjugate Journal. PMID 32086666 DOI: 10.1007/S10719-020-09911-5  0.775
2020 Colon W, Rugaber EG, Xia K. Proteomics Analyses of Kinetic Stability: from Molecular to Organism Longevity Biophysical Journal. 118: 181a. DOI: 10.1016/J.Bpj.2019.11.1104  0.651
2019 Uhl FE, Zhang F, Pouliot RA, Uriarte JJ, Enes SR, Han X, Ouyang Y, Xia K, Westergren-Thorsson G, Malmström A, Hallgren O, Linhardt RJ, Weiss DJ. Functional Role of Glycosaminoglycans in Decellularized Lung Extracellular Matrix. Acta Biomaterialia. PMID 31751810 DOI: 10.1016/J.Actbio.2019.11.029  0.57
2019 Lin L, Yu Y, Zhang F, Xia K, Zhang X, Linhardt RJ. Bottom-up and top-down profiling of pentosan polysulfate. The Analyst. PMID 31287456 DOI: 10.1039/C9An01006H  0.785
2019 Badri A, Williams A, Xia K, Linhardt RJ, Koffas MAG. Increased 3'-phosphoadenosine-5'-phosphosulfate levels in engineered Escherichia coli cell lysate facilitates in vitro synthesis of Chondroitin Sulfate A. Biotechnology Journal. e1800436. PMID 31180182 DOI: 10.1002/Biot.201800436  0.428
2019 Yu Y, Williams A, Zhang X, Fu L, Xia K, Xu Y, Zhang F, Liu J, Koffas M, Linhardt RJ. Specificity and action pattern of heparanase Bp, a β-glucuronidase from Burkholderia pseudomallei. Glycobiology. PMID 31143933 DOI: 10.1093/Glycob/Cwz039  0.766
2019 Zhang X, Han X, Xia K, Xu Y, Yang Y, Oshima K, Haeger SM, Perez MJ, McMurtry SA, Hippensteel JA, Ford JA, Herson PS, Liu J, Schmidt EP, Linhardt RJ. Circulating heparin oligosaccharides rapidly target the hippocampus in sepsis, potentially impacting cognitive functions. Proceedings of the National Academy of Sciences of the United States of America. PMID 31010931 DOI: 10.1073/Pnas.1902227116  0.543
2019 Chen J, Yu Y, Fareed J, Hoppensteadt D, Jeske W, Kouta A, Jin C, Jin Y, Yao Y, Xia K, Zhang F, Chen S, Ye X, Linhardt RJ. Comparison of Low-Molecular-Weight Heparins Prepared From Ovine Heparins With Enoxaparin. Clinical and Applied Thrombosis/Hemostasis : Official Journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis. 25: 1076029619840701. PMID 30987427 DOI: 10.1177/1076029619840701  0.711
2019 Thibeault J, Patrick J, Martin A, Ortiz-Perez B, Hill S, Zhang S, Xia K, Colón W. Sarkosyl: A milder detergent than SDS for identifying proteins with moderately high hyperstability using gel electrophoresis. Analytical Biochemistry. PMID 30779907 DOI: 10.1016/J.Ab.2019.02.008  0.782
2019 Silva JC, Carvalho MS, Han X, Xia K, Mikael PE, Cabral JMS, Ferreira FC, Linhardt RJ. Compositional and structural analysis of glycosaminoglycans in cell-derived extracellular matrices. Glycoconjugate Journal. PMID 30637588 DOI: 10.1007/S10719-019-09858-2  0.784
2019 Ouyang Y, Yu Y, Zhang F, Chen J, Han X, Xia K, Yao Y, Zhang Z, Linhardt RJ. Non-Anticoagulant Low Molecular Weight Heparins for Pharmaceutical Applications. Journal of Medicinal Chemistry. PMID 30608147 DOI: 10.1021/Acs.Jmedchem.8B01551  0.783
2019 Sarnaik A, Abernathy MH, Han X, Ouyang Y, Xia K, Chen Y, Cress B, Zhang F, Lali A, Pandit R, Linhardt RJ, Tang YJ, Koffas MA. Metabolic engineering of cyanobacteria for photoautotrophic production of heparosan, a pharmaceutical precursor of heparin Algal Research. 37: 57-63. DOI: 10.1016/J.Algal.2018.11.010  0.759
2019 Badri A, Williams A, Xia K, Linhardt RJ, Koffas MAG. Outside Back Cover: Biotechnology Journal 9/2019 Biotechnology Journal. 14: 1970095. DOI: 10.1002/Biot.201970095  0.331
2018 Mikael P, Willard C, Koyee A, Barlao CG, Liu X, Han X, Ouyang Y, Xia K, Linhardt RJ, Dordick JS. Remodeling of Glycosaminoglycans During Differentiation of Adult Human Bone Mesenchymal Stromal Cells toward Hepatocytes. Stem Cells and Development. PMID 30572803 DOI: 10.1089/Scd.2018.0197  0.765
2018 Yu Y, Zhang F, Colón W, Linhardt RJ, Xia K. Glycosaminoglycans in human cerebrospinal fluid determined by LC-MS/MS MRM. Analytical Biochemistry. PMID 30571946 DOI: 10.1016/J.Ab.2018.12.013  0.761
2018 Ouyang Y, Han X, Xia Q, Chen J, Velagapudi S, Xia K, Zhang Z, Linhardt RJ. Negative-Ion Mode Capillary Isoelectric Focusing-Mass Spectrometry for Charge-Based Separation of Acidic Oligosaccharides. Analytical Chemistry. PMID 30516363 DOI: 10.1021/Acs.Analchem.8B03500  0.631
2018 Ouyang Y, Han X, Yu Y, Chen J, Fu L, Zhang F, Linhardt RJ, Fareed J, Hoppensteadt D, Jeske W, Kouta A, Zhang Z, Xia K. Chemometric analysis of porcine, bovine and ovine heparins. Journal of Pharmaceutical and Biomedical Analysis. 164: 345-352. PMID 30428408 DOI: 10.1016/J.Jpba.2018.10.052  0.775
2018 Kizer M, Li P, Cress BF, Lin L, Jing TT, Zhang X, Xia K, Linhardt RJ, Wang X. RNA Aptamers with Specificity for Heparosan and Chondroitin Glycosaminoglycans. Acs Omega. 3: 13667-13675. PMID 30411046 DOI: 10.1021/acsomega.8b01853  0.748
2018 Zhang X, Xia K, Lin L, Zhang F, Yu Y, St Ange K, Han X, Edsinger E, Sohn JJ, Linhardt RJ. Structural and functional components of the skate sensory organ ampullae of Lorenzini. Acs Chemical Biology. PMID 29708722 DOI: 10.1021/Acschembio.8B00335  0.781
2017 Colon W, Church J, Sen J, Thibeault J, Trasatti HS, Xia K. Biological roles of protein kinetic stability. Biochemistry. PMID 29087706 DOI: 10.1021/Acs.Biochem.7B00942  0.686
2017 Thibeault J, Church J, Ortiz-Perez B, Addo S, Hill S, Khalil A, Young M, Xia K, Colón W. Analyzing bean extracts using time-dependent SDS trapping to quantify the kinetic stability of phaseolin proteins. Biochemical and Biophysical Research Communications. PMID 28774556 DOI: 10.1016/J.Bbrc.2017.07.166  0.681
2017 Gouveia M, Xia K, Colón W, Vieira SI, Ribeiro F. Protein aggregation, cardiovascular diseases, and exercise training: where do we stand? Ageing Research Reviews. PMID 28757291 DOI: 10.1016/J.Arr.2017.07.005  0.626
2017 Colón W, Xia K, Church J, Sen J, Thibeault J, Trasatti HS. Biological Roles of Protein Hyperstability: Implications for Biotechnology Biophysical Journal. 112: 56a. DOI: 10.1016/J.Bpj.2016.11.340  0.697
2016 Xia K, Pittelli S, Church J, Colon W. Kinetic Stability of Proteins in Beans and Peas: Implications for Protein Digestibility, Seed Germination, and Plant Adaptation. Journal of Agricultural and Food Chemistry. PMID 27643830 DOI: 10.1021/Acs.Jafc.6B01965  0.686
2016 Xia K, Trasatti H, Wymer JP, Colón W. Increased levels of hyper-stable protein aggregates in plasma of older adults. Age (Dordrecht, Netherlands). 38: 56. PMID 27179971 DOI: 10.1007/S11357-016-9919-9  0.663
2015 Broom A, Ma SM, Xia K, Rafalia H, Trainor K, Colón W, Gosavi S, Meiering EM. Designed protein reveals structural determinants of extreme kinetic stability. Proceedings of the National Academy of Sciences of the United States of America. PMID 26554002 DOI: 10.1073/Pnas.1510748112  0.675
2015 Xia K, Wilcox J, Kobovitch K, Ortiz B, Khalil A, Colon W. Proteomics-Level Identification of Degradation-Resistant Proteins Provide Insight about their Potential Roles in Organismal Adaptation to Stress Biophysical Journal. 108: 501a. DOI: 10.1016/J.Bpj.2014.11.2745  0.69
2012 Xia K, Zhang S, Bathrick B, Liu S, Garcia Y, Colón W. Quantifying the kinetic stability of hyperstable proteins via time-dependent SDS trapping. Biochemistry. 51: 100-7. PMID 22106876 DOI: 10.1021/Bi201362Z  0.782
2010 Xia K, Zhang S, Solina BA, Barquera B, Colón W. Do prokaryotes have more kinetically stable proteins than eukaryotic organisms? Biochemistry. 49: 7239-41. PMID 20677776 DOI: 10.1021/Bi1010877  0.772
2010 Zhang S, Xia K, Chung WK, Cramer SM, Colón W. Identifying kinetically stable proteins with capillary electrophoresis. Protein Science : a Publication of the Protein Society. 19: 888-92. PMID 20091769 DOI: 10.1002/Pro.336  0.785
2007 Xia K, Manning M, Hesham H, Lin Q, Bystroff C, Colón W. Identifying the subproteome of kinetically stable proteins via diagonal 2D SDS/PAGE. Proceedings of the National Academy of Sciences of the United States of America. 104: 17329-34. PMID 17956990 DOI: 10.1073/Pnas.0705417104  0.775
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