Chunming Ding, Ph.D. - Publications

Affiliations: 
2003 Boston University, Boston, MA, United States 
Area:
Human genome analysis; molecular genetics; new biophysical tools and methodologies; genetic engineering

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Lim YC, Chia SY, Jin S, Han W, Ding C, Sun L. Dynamic DNA methylation landscape defines brown and white cell specificity during adipogenesis. Molecular Metabolism. 5: 1033-41. PMID 27689016 DOI: 10.1016/j.molmet.2016.08.006  1
2015 Yu YM, Chan YH, Calder PC, Hardjojo A, Soh SE, Lim AL, Fisk HL, Teoh OH, Goh A, Saw SM, Kwek K, Gluckman PD, Godfrey KM, Chong YS, Shek LP, et al. Maternal PUFA status and offspring allergic diseases up to the age of 18 months. The British Journal of Nutrition. 113: 975-83. PMID 25746049 DOI: 10.1017/S000711451500001X  1
2014 Broekman BF, Wang C, Li Y, Rifkin-Graboi A, Saw SM, Chong YS, Kwek K, Gluckman PD, Fortier MV, Meaney MJ, Qiu A. Gestational age and neonatal brain microstructure in term born infants: a birth cohort study. Plos One. 9: e115229. PMID 25535959 DOI: 10.1371/journal.pone.0115229  1
2014 Chong YS, Cai S, Lin H, Soh SE, Lee YS, Leow MK, Chan YH, Chen L, Holbrook JD, Tan KH, Rajadurai VS, Yeo GS, Kramer MS, Saw SM, Gluckman PD, et al. Ethnic differences translate to inadequacy of high-risk screening for gestational diabetes mellitus in an Asian population: a cohort study. Bmc Pregnancy and Childbirth. 14: 345. PMID 25273851 DOI: 10.1186/1471-2393-14-345  1
2014 Chong MF, Wong JX, Colega M, Chen LW, van Dam RM, Tan CS, Lim AL, Cai S, Broekman BF, Lee YS, Saw SM, Kwek K, Godfrey KM, Chong YS, Gluckman P, et al. Relationships of maternal folate and vitamin B12 status during pregnancy with perinatal depression: The GUSTO study. Journal of Psychiatric Research. 55: 110-6. PMID 24774647 DOI: 10.1016/j.jpsychires.2014.04.006  1
2014 Jin S, Lim YC, Ng DP, Law HY, Kwek KY, Yeo GS, Ding C. Accurate fetal chromosome dosage determination by shotgun sequencing of maternal plasma DNA without PCR amplification during library preparation. Clinical Chemistry. 60: 690-2. PMID 24491273 DOI: 10.1373/clinchem.2013.216838  1
2014 Lee YK, Jin S, Duan S, Lim YC, Ng DP, Lin XM, Yeo GSh, Ding C. Improved reduced representation bisulfite sequencing for epigenomic profiling of clinical samples. Biological Procedures Online. 16: 1. PMID 24406024 DOI: 10.1186/1480-9222-16-1  1
2014 Soh SE, Saw SM, Tint MT, Chong YS, Gluckman PD, Rifkin-Graboi A, Stünkel W, Holbrook JD, Godfrey KM, Chan YH, Kwek K, Sheppard A, Chinnadurai A, Ferguson-Smith A, Biswas A, ... ... Ding CM, et al. Cohort profile: Growing up in Singapore towards healthy outcomes (GUSTO) birth cohort study International Journal of Epidemiology. 43: 1401-1409. DOI: 10.1093/ije/dyt125  1
2013 Das R, Lee YK, Strogantsev R, Jin S, Lim YC, Ng PY, Lin XM, Chng K, Yeo GSh, Ferguson-Smith AC, Ding C. DNMT1 and AIM1 Imprinting in human placenta revealed through a genome-wide screen for allele-specific DNA methylation. Bmc Genomics. 14: 685. PMID 24094292 DOI: 10.1186/1471-2164-14-685  1
2013 Zhang RR, Cui QY, Murai K, Lim YC, Smith ZD, Jin S, Ye P, Rosa L, Lee YK, Wu HP, Liu W, Xu ZM, Yang L, Ding YQ, Tang F, ... ... Ding C, et al. Tet1 regulates adult hippocampal neurogenesis and cognition. Cell Stem Cell. 13: 237-45. PMID 23770080 DOI: 10.1016/j.stem.2013.05.006  1
2013 Jin S, Lee YK, Lim YC, Zheng Z, Lin XM, Ng DP, Holbrook JD, Law HY, Kwek KY, Yeo GS, Ding C. Global DNA hypermethylation in down syndrome placenta. Plos Genetics. 9: e1003515. PMID 23754950 DOI: 10.1371/journal.pgen.1003515  1
2012 Lee SA, Ding C. The dysfunctional placenta epigenome: causes and consequences. Epigenomics. 4: 561-9. PMID 23130837 DOI: 10.2217/epi.12.49  1
2012 Pan H, Chen L, Dogra S, Teh AL, Tan JH, Lim YI, Lim YC, Jin S, Lee YK, Ng PY, Ong ML, Barton S, Chong YS, Meaney MJ, Gluckman PD, ... ... Ding C, et al. Measuring the methylome in clinical samples: improved processing of the Infinium Human Methylation450 BeadChip Array. Epigenetics : Official Journal of the Dna Methylation Society. 7: 1173-87. PMID 22964528 DOI: 10.4161/epi.22102  1
2012 Jin S, Lin XM, Law H, Kwek KY, Yeo GS, Ding C. Further improvement in quantifying male fetal DNA in maternal plasma. Clinical Chemistry. 58: 465-8. PMID 22100805 DOI: 10.1373/clinchem.2011.174417  1
2010 Tong YK, Jin S, Chiu RW, Ding C, Chan KC, Leung TY, Yu L, Lau TK, Lo YM. Noninvasive prenatal detection of trisomy 21 by an epigenetic-genetic chromosome-dosage approach. Clinical Chemistry. 56: 90-8. PMID 19850629 DOI: 10.1373/clinchem.2009.134114  1
2009 Li XX, Wong GL, To KF, Wong VW, Lai LH, Chow DK, Lau JY, Sung JJ, Ding C. Bacterial microbiota profiling in gastritis without Helicobacter pylori infection or non-steroidal anti-inflammatory drug use. Plos One. 4: e7985. PMID 19956741 DOI: 10.1371/journal.pone.0007985  1
2009 Ding C, Jin S. High-throughput methods for SNP genotyping. Methods in Molecular Biology (Clifton, N.J.). 578: 245-54. PMID 19768599 DOI: 10.1007/978-1-60327-411-1_16  1
2009 Luan J, Yuan J, Li X, Jin S, Yu L, Liao M, Zhang H, Xu C, He Q, Wen B, Zhong X, Chen X, Chan HL, Sung JJ, Zhou B, ... Ding C, et al. Multiplex detection of 60 hepatitis B virus variants by maldi-tof mass spectrometry. Clinical Chemistry. 55: 1503-9. PMID 19541863 DOI: 10.1373/clinchem.2009.124859  1
2009 Heung MM, Jin S, Tsui NB, Ding C, Leung TY, Lau TK, Chiu RW, Lo YM. Placenta-derived fetal specific mRNA is more readily detectable in maternal plasma than in whole blood. Plos One. 4: e5858. PMID 19516908 DOI: 10.1371/journal.pone.0005858  1
2008 Zhou Bp, Zhang Hm, Li Xh, Yuan J, Li W, Xu Lm, Wang Hs, Chen Xc, Ding Cm. High throughput detection of drug-resistance gene mutations in HBV using MALDI-TOF mass spectrometry Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi = Zhonghua Shiyan He Linchuang Bingduxue Zazhi = Chinese Journal of Experimental and Clinical Virology. 22: 351-353. PMID 19469172  1
2008 Chan KC, Lai PB, Mok TS, Chan HL, Ding C, Yeung SW, Lo YM. Quantitative analysis of circulating methylated DNA as a biomarker for hepatocellular carcinoma. Clinical Chemistry. 54: 1528-36. PMID 18653827 DOI: 10.1373/clinchem.2008.104653  1
2008 Ding C. Maldi-TOF mass spectrometry for analyzing cell-free fetal DNA in maternal plasma. Methods in Molecular Biology (Clifton, N.J.). 444: 253-67. PMID 18425487 DOI: 10.1007/978-1-59745-066-9_20  1
2008 Chim SS, Jin S, Lee TY, Lun FM, Lee WS, Chan LY, Jin Y, Yang N, Tong YK, Leung TY, Lau TK, Ding C, Chiu RW, Lo YM. Systematic search for placental DNA-methylation markers on chromosome 21: toward a maternal plasma-based epigenetic test for fetal trisomy 21. Clinical Chemistry. 54: 500-11. PMID 18202156 DOI: 10.1373/clinchem.2007.098731  1
2007 Tong YK, Chiu RW, Leung TY, Ding C, Lau TK, Leung TN, Lo YM. Detection of restriction enzyme-digested target DNA by PCR amplification using a stem-loop primer: application to the detection of hypomethylated fetal DNA in maternal plasma. Clinical Chemistry. 53: 1906-14. PMID 17901110 DOI: 10.1373/clinchem.2007.092619  1
2007 Ding C. 'Other' applications of single nucleotide polymorphisms. Trends in Biotechnology. 25: 279-83. PMID 17493698 DOI: 10.1016/j.tibtech.2007.04.007  1
2007 Lo YM, Tsui NB, Chiu RW, Lau TK, Leung TN, Heung MM, Gerovassili A, Jin Y, Nicolaides KH, Cantor CR, Ding C. Plasma placental RNA allelic ratio permits noninvasive prenatal chromosomal aneuploidy detection. Nature Medicine. 13: 218-23. PMID 17206148 DOI: 10.1038/nm1530  1
2007 Chow KC, Chiu RW, Tsui NB, Ding C, Lau TK, Leung TN, Lo YM. Mass spectrometric detection of an SNP panel as an internal positive control for fetal DNA analysis in maternal plasma. Clinical Chemistry. 53: 141-2. PMID 17202498 DOI: 10.1373/clinchem.2007.079335  1
2006 Ding C, Wong VW, Chow KC, Chan HY, Hui AY, Wong GL, Lo YM, Sung JJ, Chan HL. Quantitative subtyping of hepatitis B virus reveals complex dynamics of YMDD motif mutants development during long-term lamivudine therapy. Antiviral Therapy. 11: 1041-9. PMID 17302374  1
2006 Ding C, Lo YM. MALDI-TOF mass spectrometry for quantitative, specific, and sensitive analysis of DNA and RNA. Annals of the New York Academy of Sciences. 1075: 282-7. PMID 17108222 DOI: 10.1196/annals.1368.038  1
2006 Chan KC, Ding C, Gerovassili A, Yeung SW, Chiu RW, Leung TN, Lau TK, Chim SS, Chung GT, Nicolaides KH, Lo YM. Hypermethylated RASSF1A in maternal plasma: A universal fetal DNA marker that improves the reliability of noninvasive prenatal diagnosis. Clinical Chemistry. 52: 2211-8. PMID 17068167 DOI: 10.1373/clinchem.2006.074997  1
2006 Tong YK, Ding C, Chiu RW, Gerovassili A, Chim SS, Leung TY, Leung TN, Lau TK, Nicolaides KH, Lo YM. Noninvasive prenatal detection of fetal trisomy 18 by epigenetic allelic ratio analysis in maternal plasma: Theoretical and empirical considerations. Clinical Chemistry. 52: 2194-202. PMID 17040955 DOI: 10.1373/clinchem.2006.076851  1
2006 Ding C. Qualitative and quantitative DNA and RNA analysis by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 336: 59-71. PMID 16916253 DOI: 10.1385/1-59745-074-X:59  1
2005 Tsui NB, Chiu RW, Ding C, El-Sheikhah A, Leung TN, Lau TK, Nicolaides KH, Lo YM. Detection of trisomy 21 by quantitative mass spectrometric analysis of single-nucleotide polymorphisms. Clinical Chemistry. 51: 2358-62. PMID 16306096 DOI: 10.1373/clinchem.2005.056978  1
2005 Chim SS, Tong YK, Chiu RW, Lau TK, Leung TN, Chan LY, Oudejans CB, Ding C, Lo YM. Detection of the placental epigenetic signature of the maspin gene in maternal plasma. Proceedings of the National Academy of Sciences of the United States of America. 102: 14753-8. PMID 16203989 DOI: 10.1073/pnas.0503335102  1
2005 Mao H, Ferguson TS, Cibulsky SM, Holmqvist M, Ding C, Fei H, Levitan IB. MONaKA, a novel modulator of the plasma membrane Na,K-ATPase. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 25: 7934-43. PMID 16135750 DOI: 10.1523/JNEUROSCI.0635-05.2005  1
2005 Rachlin J, Ding C, Cantor C, Kasif S. Computational tradeoffs in multiplex PCR assay design for SNP genotyping. Bmc Genomics. 6: 102. PMID 16042802 DOI: 10.1186/1471-2164-6-102  1
2005 Rachlin J, Ding C, Cantor C, Kasif S. MuPlex: multi-objective multiplex PCR assay design. Nucleic Acids Research. 33: W544-7. PMID 15980531 DOI: 10.1093/nar/gki377  1
2005 McCullough RM, Cantor CR, Ding C. High-throughput alternative splicing quantification by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Nucleic Acids Research. 33: e99. PMID 15967806 DOI: 10.1093/nar/gni098  1
2004 Ding C, Chiu RW, Lau TK, Leung TN, Chan LC, Chan AY, Charoenkwan P, Ng IS, Law HY, Ma ES, Xu X, Wanapirak C, Sanguansermsri T, Liao C, Ai MA, et al. MS analysis of single-nucleotide differences in circulating nucleic acids: Application to noninvasive prenatal diagnosis. Proceedings of the National Academy of Sciences of the United States of America. 101: 10762-7. PMID 15247415 DOI: 10.1073/pnas.0403962101  1
2004 Isaacs FJ, Dwyer DJ, Ding C, Pervouchine DD, Cantor CR, Collins JJ. Engineered riboregulators enable post-transcriptional control of gene expression. Nature Biotechnology. 22: 841-7. PMID 15208640 DOI: 10.1038/nbt986  1
2004 Ding C, Maier E, Roscher AA, Braun A, Cantor CR. Simultaneous quantitative and allele-specific expression analysis with real competitive PCR. Bmc Genetics. 5: 8. PMID 15128429 DOI: 10.1186/1471-2156-5-8  1
2004 Spira A, Beane J, Schembri F, Liu G, Ding C, Gilman S, Yang X, Cantor C, Brody JS. Noninvasive method for obtaining RNA from buccal mucosa epithelial cells for gene expression profiling. Biotechniques. 36: 484-7. PMID 15038164  1
2004 Karaoz U, Murali TM, Letovsky S, Zheng Y, Ding C, Cantor CR, Kasif S. Whole-genome annotation by using evidence integration in functional-linkage networks. Proceedings of the National Academy of Sciences of the United States of America. 101: 2888-93. PMID 14981259 DOI: 10.1073/pnas.0307326101  1
2004 Ding C, Cantor CR. Quantitative analysis of nucleic acids--the last few years of progress. Journal of Biochemistry and Molecular Biology. 37: 1-10. PMID 14761298  1
2003 Ding C, Cantor CR. Direct molecular haplotyping of long-range genomic DNA with M1-PCR. Proceedings of the National Academy of Sciences of the United States of America. 100: 7449-53. PMID 12802015 DOI: 10.1073/pnas.1232475100  1
2003 Ding C, Cantor CR. A high-throughput gene expression analysis technique using competitive PCR and matrix-assisted laser desorption ionization time-of-flight MS. Proceedings of the National Academy of Sciences of the United States of America. 100: 3059-64. PMID 12624187 DOI: 10.1073/pnas.0630494100  1
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