Yingjie Wang, Ph.D. - Publications

2014 Chemical Physics University of Minnesota, Twin Cities, Minneapolis, MN 
Chemical Biology; Chemical Physics; Computational Chemistry; Physical Chemistry; Organic Chemistry

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Olivieri C, Wang Y, Li GC, Subrahmanian MV, Kim J, Stultz BR, Neibergall M, Porcelli F, Muretta JM, T Thomas DD, Gao J, Blumenthal DK, Taylor SS, Veglia G. Multi-state recognition pathway of the intrinsically disordered protein kinase inhibitor by protein kinase A. Elife. 9. PMID 32338601 DOI: 10.7554/eLife.55607  0.6
2019 Ge J, Yan Q, Wang Y, Cheng X, Song D, Wu C, Yu H, Yang H, Zou J. IL-10 delays the degeneration of intervertebral discs by suppressing the p38 MAPK signaling pathway-10 protects intervertebral disc via p38 MAPK pathway. Free Radical Biology & Medicine. PMID 31883468 DOI: 10.1016/j.freeradbiomed.2019.12.040  0.36
2019 Gu C, Chen H, Wang Y, Zhang T, Wang H, Zhao G. Structural Insight into Binary Protein MOFs with Ferritin Nanocages as Linkers and Nickel Clusters as Nodes. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 31820500 DOI: 10.1002/chem.201905315  0.32
2019 Gao X, Xu T, Jiang Z, Yu H, Wang Y, He Y. Rational construction and remarkable gas adsorption properties of a HKUST-1-like tbo-type MOF based on a tetraisophthalate linker. Dalton Transactions (Cambridge, England : 2003). PMID 31681938 DOI: 10.1039/c9dt03716k  0.36
2019 Walker C, Wang Y, Olivieri C, Karamafrooz A, Casby J, Bathon K, Calebiro D, Gao J, Bernlohr DA, Taylor SS, Veglia G. Cushing's syndrome driver mutation disrupts protein kinase A allosteric network, altering both regulation and substrate specificity. Science Advances. 5: eaaw9298. PMID 31489371 DOI: 10.1126/sciadv.aaw9298  0.6
2019 Wang Y, V S M, Kim J, Li G, Ahuja LG, Aoto P, Taylor SS, Veglia G. Globally correlated conformational entropy underlies positive and negative cooperativity in a kinase's enzymatic cycle. Nature Communications. 10: 799. PMID 30778078 DOI: 10.1038/s41467-019-08655-7  0.44
2019 Shang J, Gao J, Xi J, Wang Y, Ji F, Li R. Immobilization of Cr(VI) from solution by a graphene oxide-nZVI/biochar composite. Water Environment Research : a Research Publication of the Water Environment Federation. PMID 30667126 DOI: 10.1002/wer.1059  0.6
2018 Li H, Li J, Wang X, Pang H, Di Y, Ren G, Li P, Liu C, Chen X, Kang X, Wang Y, Xia T. Promising Clinical Outcome With Long Term Follow-Up After Body Gamma Knife Stereotactic Radiosurgery for Patients With Early Stage Non-small Cell Lung Cancer. Frontiers in Oncology. 8: 618. PMID 30622929 DOI: 10.3389/fonc.2018.00618  0.32
2018 Zhao Y, Wang Y, Niu C, Zhang L, Li G, Yang Y. Construction of polyacrylamide/graphene oxide/gelatin/sodium alginate (PAM/GO/Gel/SA) composite hydrogel for promoting Schwann cells growth. Journal of Biomedical Materials Research. Part A. PMID 29575695 DOI: 10.1002/jbm.a.36393  0.4
2018 Tomasini MD, Wang Y, Karamafrooz A, Li G, Beuming T, Gao J, Taylor SS, Veglia G, Simon SM. Conformational Landscape of the PRKACA-DNAJB1 Chimeric Kinase, the Driver for Fibrolamellar Hepatocellular Carcinoma. Scientific Reports. 8: 720. PMID 29335433 DOI: 10.1038/s41598-017-18956-w  0.6
2017 Xu D, Sun Y, Wang C, Wang H, Wang Y, Zhao W, Bao G, Wang F, Cui Z, Jiang B. Hippocampal mTOR signaling is required for the antidepressant effects of paroxetine. Neuropharmacology. PMID 29030165 DOI: 10.1016/j.neuropharm.2017.10.008  0.32
2016 Dicke A, Gopinath T, Wang Y, Veglia G. Probing Residue-Specific Water-Protein Interactions in Oriented Lipid Membranes via Solid-State NMR Spectroscopy. The Journal of Physical Chemistry. B. PMID 27704861 DOI: 10.1021/acs.jpcb.6b08282  0.4
2016 Kim J, Wang Y, Li G, Veglia G. A Semiautomated Assignment Protocol for Methyl Group Side Chains in Large Proteins. Methods in Enzymology. 566: 35-57. PMID 26791975 DOI: 10.1016/bs.mie.2015.08.033  0.4
2015 Wang Y, Gao J. Projected hybrid orbitals: a general QM/MM method. The Journal of Physical Chemistry. B. 119: 1213-24. PMID 25317748 DOI: 10.1021/jp507983u  0.6
2014 Liu M, Wang Y, Chen Y, Field MJ, Gao J. QM/MM through the 1990s: The First Twenty Years of Method Development and Applications. Israel Journal of Chemistry. 54: 1250-1263. PMID 29386687 DOI: 10.1002/ijch.201400036  0.6
2014 Gao J, Truhlar DG, Wang Y, Mazack MJ, Löffler P, Provorse MR, Rehak P. Explicit polarization: a quantum mechanical framework for developing next generation force fields. Accounts of Chemical Research. 47: 2837-45. PMID 25098651 DOI: 10.1021/ar5002186  0.6
2014 Liu C, Wang Y, Huang H, Wang C, Zhang H, Kong Y, Zhang H. Association between CLPTM1L-TERT rs401681 polymorphism and pancreatic cancer risk among Chinese Han population. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. 35: 5453-7. PMID 24577890 DOI: 10.1007/s13277-014-1711-9  0.32
2013 Isegawa M, Fiedler L, Leverentz HR, Wang Y, Nachimuthu S, Gao J, Truhlar DG. Polarized Molecular Orbital Model Chemistry 3. The PMO Method Extended to Organic Chemistry. Journal of Chemical Theory and Computation. 9: 33-45. PMID 23704835 DOI: 10.1021/ct300509d  0.56
2013 Wang A, Chen F, Wang Y, Shen M, Xu Y, Hu J, Wang S, Geng F, Wang C, Ran X, Su Y, Cheng T, Wang J. Enhancement of antiviral activity of human alpha-defensin 5 against herpes simplex virus 2 by arginine mutagenesis at adaptive evolution sites. Journal of Virology. 87: 2835-45. PMID 23269800 DOI: 10.1128/JVI.02209-12  0.32
2012 Yang H, Liu C, Jamsen J, Wu Z, Wang Y, Chen J, Zheng L, Shen B. The DNase domain-containing protein TATDN1 plays an important role in chromosomal segregation and cell cycle progression during zebrafish eye development. Cell Cycle (Georgetown, Tex.). 11: 4626-32. PMID 23187801 DOI: 10.4161/cc.22886  0.32
2012 Guo Z, Kanjanapangka J, Liu N, Liu S, Liu C, Wu Z, Wang Y, Loh T, Kowolik C, Jamsen J, Zhou M, Truong K, Chen Y, Zheng L, Shen B. Sequential posttranslational modifications program FEN1 degradation during cell-cycle progression. Molecular Cell. 47: 444-56. PMID 22749529 DOI: 10.1016/j.molcel.2012.05.042  0.32
2012 Wang Y, Sosa CP, Cembran A, Truhlar DG, Gao J. Multilevel X-Pol: a fragment-based method with mixed quantum mechanical representations of different fragments. The Journal of Physical Chemistry. B. 116: 6781-8. PMID 22428657 DOI: 10.1021/jp212399g  0.56
2012 Gao J, Wang Y. Communication: variational many-body expansion: accounting for exchange repulsion, charge delocalization, and dispersion in the fragment-based explicit polarization method. The Journal of Chemical Physics. 136: 071101. PMID 22360228 DOI: 10.1063/1.3688232  0.6
2011 Yu H, Liu Y, Han J, Yang Z, Sheng W, Dai H, Wang Y, Xia T, Hou M. TLR7 regulates dendritic cell-dependent B-cell responses through BlyS in immune thrombocytopenic purpura. European Journal of Haematology. 86: 67-74. PMID 21039888 DOI: 10.1111/j.1600-0609.2010.01534.x  0.36
2010 Cembran A, Bao P, Wang Y, Song L, Truhlar DG, Gao J. On the Interfragment Exchange in the X-Pol Method. Journal of Chemical Theory and Computation. 6: 2469-2476. PMID 20730021 DOI: 10.1021/ct100268p  0.6
2010 Liu T, Zhang S, Chen X, Li G, Wang Y. Hepatic differentiation of mouse embryonic stem cells in three-dimensional polymer scaffolds. Tissue Engineering. Part A. 16: 1115-22. PMID 19916802 DOI: 10.1089/ten.TEA.2009.0391  0.4
2005 Wang Y, Wang L, Feng Q, Chen D, Zhang H, Xiao Z, Zhou Z, Ou G, Zhao L, Zhang Z, Zhang K, Yin W. [Factors predicting radiation toxicity in the treatment of three-dimensional conformal radiotherapy for lung cancer]. Zhongguo Fei Ai Za Zhi = Chinese Journal of Lung Cancer. 8: 454-8. PMID 21205533 DOI: 10.3779/j.issn.1009-3419.2005.05.22  0.32
2004 Gao J, Wang Y, Chen S, Cui H, Mao X, Zhang L, Gao M. [Determination and identification of anions and cations in cosmetics]. SE Pu = Chinese Journal of Chromatography / Zhongguo Hua Xue Hui. 22: 68-71. PMID 15712952  0.6
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