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Seth T. Walk, Ph.D. - Publications

Affiliations: 
2007 Michigan State University, East Lansing, MI 
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46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Maslanka JR, Gu CH, Zarin I, Denny JE, Broadaway S, Fett B, Mattei LM, Walk ST, Abt MC. Detection and elimination of a novel non-toxigenic strain from the microbiota of a mouse colony. Gut Microbes. 12: 1-15. PMID 33305657 DOI: 10.1080/19490976.2020.1851999  0.304
2020 Snydman DR, McDermott LA, Jenkins SG, Goldstein EJC, Patel R, Forbes BA, Johnson S, Gerding DN, Thorpe CM, Walk ST. Epidemiologic trends in Clostridioides difficile isolate ribotypes in United States from 2011 to 2016. Anaerobe. 102185. PMID 32387171 DOI: 10.1016/J.Anaerobe.2020.102185  0.323
2020 Gonzales-Luna AJ, Carlson TJ, Dotson KM, Poblete K, Costa G, Miranda J, Lancaster C, Walk ST, Tupy S, Begum K, Alam MJ, Garey KW. PCR ribotypes of across Texas from 2011 to 2018 including emergence of ribotype 255. Emerging Microbes & Infections. 9: 341-347. PMID 32037964 DOI: 10.1080/22221751.2020.1721335  0.363
2019 Martinson JNV, Pinkham NV, Peters GW, Cho H, Heng J, Rauch M, Broadaway SC, Walk ST. Rethinking gut microbiome residency and the Enterobacteriaceae in healthy human adults. The Isme Journal. PMID 31089259 DOI: 10.1038/S41396-019-0435-7  0.325
2019 Endres BT, Begum K, Sun H, Walk ST, Memariani A, Lancaster C, Gonzales-Luna AJ, Dotson KM, Bassères E, Offiong C, Tupy S, Kuper K, Septimus E, Arafat R, Alam MJ, et al. Epidemic Ribotype 027 Lineages: Comparisons of Texas Versus Worldwide Strains. Open Forum Infectious Diseases. 6: ofz013. PMID 30793006 DOI: 10.1093/Ofid/Ofz013  0.347
2018 Snydman DR, McDermott LA, Thorpe CM, Chang J, Wick J, Walk ST, Vickers RJ. Antimicrobial susceptibility and ribotypes of Clostridium difficile isolates from a Phase 2 clinical trial of ridinilazole (SMT19969) and vancomycin. The Journal of Antimicrobial Chemotherapy. PMID 29718329 DOI: 10.1093/Jac/Dky135  0.342
2018 Gardiner BJ, Thorpe CM, Pinkham NV, McDermott LA, Walk ST, Snydman DR. A repeat offender: Recurrent extraintestinal Clostridium difficile infection following fecal microbiota transplantation. Anaerobe. 51: 68-72. PMID 29709869 DOI: 10.1016/J.Anaerobe.2018.04.007  0.33
2018 Blanco N, Walk S, Malani AN, Rickard A, Benn M, Eisenberg M, Zhang M, Foxman B. Clostridium difficile shows no trade-off between toxin and spore production within the human host. Journal of Medical Microbiology. PMID 29533173 DOI: 10.1099/Jmm.0.000719  0.337
2018 Alexeev EE, Lanis JM, Kao DJ, Campbell EL, Kelly CJ, Battista KD, Gerich ME, Jenkins BR, Walk ST, Kominsky DJ, Colgan SP. Microbiota-Derived Indole Metabolites Promote Human and Murine Intestinal Homeostasis through Regulation of Interleukin-10 Receptor. The American Journal of Pathology. PMID 29454749 DOI: 10.1016/J.Ajpath.2018.01.011  0.335
2018 Micic D, Yarur A, Gonsalves A, Rao VL, Broadaway S, Cohen R, Dalal S, Gaetano JN, Glick LR, Hirsch A, Pekow J, Sakuraba A, Walk ST, Rubin DT. Risk Factors for Clostridium difficile Isolation in Inflammatory Bowel Disease: A Prospective Study. Digestive Diseases and Sciences. PMID 29417331 DOI: 10.1007/S10620-018-4941-7  0.317
2017 Hill DR, Huang S, Nagy MS, Yadagiri VK, Fields C, Mukherjee D, Bons B, Dedhia PH, Chin AM, Tsai YH, Thodla S, Schmidt TM, Walk S, Young VB, Spence JR. Bacterial colonization stimulates a complex physiological response in the immature human intestinal epithelium. Elife. 6. PMID 29110754 DOI: 10.7554/Elife.29132  0.335
2017 Alam MJ, Walk ST, Endres BT, Basseres E, Khaleduzzaman M, Amadio J, Musick WL, Christensen JL, Kuo J, Atmar RL, Garey KW. Community Environmental Contamination of Toxigenic Clostridium difficile. Open Forum Infectious Diseases. 4: ofx018. PMID 28480289 DOI: 10.1093/Ofid/Ofx018  0.342
2017 Snydman DR, McDermott LA, Jenkins SG, Goldstein EJC, Patel R, Forbes BA, Johnson S, Gerding DN, Thorpe CM, Walk ST. Epidemiologic Trends in Clostridium difficile Isolate Ribotypes in United States from 2010 to 2014 Open Forum Infectious Diseases. 4: S391-S391. DOI: 10.1093/Ofid/Ofx163.973  0.303
2016 Manrique P, Bolduc B, Walk ST, van der Oost J, de Vos WM, Young MJ. Healthy human gut phageome. Proceedings of the National Academy of Sciences of the United States of America. PMID 27573828 DOI: 10.1073/Pnas.1601060113  0.315
2016 Micic D, Gaetano JN, Gonsalves A, Broadaway S, Hirsch A, Yarur A, Cohen R, Dalal S, Pekow J, Sakuraba A, Walk S, Rubin DT. Crohnʼs Disease, Antibiotic Use, and Recent Health Care Exposures Are Associated with Clostridium difficile Isolation in IBD American Journal of Gastroenterology. 111: S270-S271. DOI: 10.14309/00000434-201610001-00590  0.305
2015 Aitken SL, Alam MJ, Khaleduzzuman M, Walk ST, Musick WL, Pham VP, Christensen JL, Atmar RL, Xie Y, Garey KW. In the Endemic Setting, Clostridium difficile Ribotype 027 Is Virulent But Not Hypervirulent. Infection Control and Hospital Epidemiology. 1-6. PMID 26288985 DOI: 10.1017/Ice.2015.187  0.33
2015 Rao K, Micic D, Natarajan M, Winters S, Kiel MJ, Walk ST, Santhosh K, Mogle JA, Galecki AT, LeBar W, Higgins PD, Young VB, Aronoff DM. Clostridium difficile Ribotype 027: Relationship to Age, Detectability of Toxins A or B in Stool With Rapid Testing, Severe Infection, and Mortality. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 61: 233-41. PMID 25828993 DOI: 10.1093/Cid/Civ254  0.326
2015 Martinson JN, Broadaway S, Lohman E, Johnson C, Alam MJ, Khaleduzzaman M, Garey KW, Schlackman J, Young VB, Santhosh K, Rao K, Lyons RH, Walk ST. Evaluation of portability and cost of a fluorescent PCR ribotyping protocol for Clostridium difficile epidemiology. Journal of Clinical Microbiology. 53: 1192-7. PMID 25631804 DOI: 10.1128/Jcm.03591-14  0.342
2014 Alam MJ, Anu A, Walk ST, Garey KW. Investigation of potentially pathogenic Clostridium difficile contamination in household environs. Anaerobe. 27: 31-3. PMID 24657158 DOI: 10.1016/J.Anaerobe.2014.03.002  0.327
2013 Jain R, Walk ST, Aronoff DM, Young VB, Newton DW, Chenoweth CE, Washer LL. Emergence of Carbapenemaseproducing Klebsiella Pneumoniae of Sequence type 258 in Michigan, USA. Infectious Disease Reports. 5: e5. PMID 24470956 DOI: 10.4081/Idr.2013.E5  0.368
2013 Natarajan M, Walk ST, Young VB, Aronoff DM. A clinical and epidemiological review of non-toxigenic Clostridium difficile. Anaerobe. 22: 1-5. PMID 23727391 DOI: 10.1016/J.Anaerobe.2013.05.005  0.413
2013 Carlson PE, Walk ST, Bourgis AE, Liu MW, Kopliku F, Lo E, Young VB, Aronoff DM, Hanna PC. The relationship between phenotype, ribotype, and clinical disease in human Clostridium difficile isolates. Anaerobe. 24: 109-16. PMID 23608205 DOI: 10.1016/J.Anaerobe.2013.04.003  0.416
2013 Rao K, Walk ST, Micic D, Chenoweth E, Deng L, Galecki AT, Jain R, Trivedi I, Yu M, Santhosh K, Ring C, Young VB, Huffnagle GB, Aronoff DM. Procalcitonin levels associate with severity of Clostridium difficile infection. Plos One. 8: e58265. PMID 23505476 DOI: 10.1371/Journal.Pone.0058265  0.332
2013 Walk ST, Micic D, Galecki AT, Rogers MA, Washer L, Newton DW, Malani PN, Young VB, Aronoff DM. Reply to Walker et al. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 56: 1846-7. PMID 23420819 DOI: 10.1093/Cid/Cit099  0.319
2013 Feglo P, Adu-Sarkodie Y, Ayisi L, Jain R, Spurbeck RR, Springman AC, Engleberg NC, Newton DW, Xi C, Walk ST. Emergence of a novel extended-spectrum-β-lactamase (ESBL)-producing, fluoroquinolone-resistant clone of extraintestinal pathogenic Escherichia coli in Kumasi, Ghana. Journal of Clinical Microbiology. 51: 728-30. PMID 23241377 DOI: 10.1128/Jcm.03006-12  0.315
2013 Walk ST, Micic D, Galecki AT, Rogers MA, Washer L, Newton DW, Malani PN, Young VB, Aronoff DM. Reply to McDonald. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 56: 907-8. PMID 23196958 DOI: 10.1093/Cid/Cis1003  0.361
2012 Nelson AM, Walk ST, Taube S, Taniuchi M, Houpt ER, Wobus CE, Young VB. Disruption of the human gut microbiota following Norovirus infection. Plos One. 7: e48224. PMID 23118957 DOI: 10.1371/Journal.Pone.0048224  0.571
2012 Walk ST, Micic D, Jain R, Lo ES, Trivedi I, Liu EW, Almassalha LM, Ewing SA, Ring C, Galecki AT, Rogers MA, Washer L, Newton DW, Malani PN, Young VB, et al. Clostridium difficile ribotype does not predict severe infection. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 55: 1661-8. PMID 22972866 DOI: 10.1093/Cid/Cis786  0.337
2012 Spurbeck RR, Dinh PC, Walk ST, Stapleton AE, Hooton TM, Nolan LK, Kim KS, Johnson JR, Mobley HL. Escherichia coli isolates that carry vat, fyuA, chuA, and yfcV efficiently colonize the urinary tract. Infection and Immunity. 80: 4115-22. PMID 22966046 DOI: 10.1128/Iai.00752-12  0.427
2012 Walters MS, Lane MC, Vigil PD, Smith SN, Walk ST, Mobley HL. Kinetics of uropathogenic Escherichia coli metapopulation movement during urinary tract infection. Mbio. 3. PMID 22318320 DOI: 10.1128/Mbio.00303-11  0.398
2011 Spurbeck RR, Stapleton AE, Johnson JR, Walk ST, Hooton TM, Mobley HL. Fimbrial profiles predict virulence of uropathogenic Escherichia coli strains: contribution of ygi and yad fimbriae. Infection and Immunity. 79: 4753-63. PMID 21911462 DOI: 10.1128/Iai.05621-11  0.407
2011 Walk ST, Jain R, Trivedi I, Grossman S, Newton DW, Thelen T, Hao Y, Songer JG, Carter GP, Lyras D, Young VB, Aronoff DM. Non-toxigenic Clostridium sordellii: clinical and microbiological features of a case of cholangitis-associated bacteremia. Anaerobe. 17: 252-6. PMID 21726656 DOI: 10.1016/J.Anaerobe.2011.06.009  0.399
2011 Clermont O, Gordon DM, Brisse S, Walk ST, Denamur E. Characterization of the cryptic Escherichia lineages: rapid identification and prevalence. Environmental Microbiology. 13: 2468-77. PMID 21651689 DOI: 10.1111/J.1462-2920.2011.02519.X  0.41
2011 Luo C, Walk ST, Gordon DM, Feldgarden M, Tiedje JM, Konstantinidis KT. Genome sequencing of environmental Escherichia coli expands understanding of the ecology and speciation of the model bacterial species. Proceedings of the National Academy of Sciences of the United States of America. 108: 7200-5. PMID 21482770 DOI: 10.1073/Pnas.1015622108  0.403
2011 Ingle DJ, Clermont O, Skurnik D, Denamur E, Walk ST, Gordon DM. Biofilm formation by and thermal niche and virulence characteristics of Escherichia spp. Applied and Environmental Microbiology. 77: 2695-700. PMID 21335385 DOI: 10.1128/Aem.02401-10  0.398
2011 Dave M, Johnson LA, Walk ST, Young VB, Stidham RW, Chaudhary MN, Funnell J, Higgins PD. A randomised trial of sheathed versus standard forceps for obtaining uncontaminated biopsy specimens of microbiota from the terminal ileum. Gut. 60: 1043-9. PMID 21317176 DOI: 10.1136/Gut.2010.224337  0.312
2010 Walk ST, Blum AM, Ewing SA, Weinstock JV, Young VB. Alteration of the murine gut microbiota during infection with the parasitic helminth Heligmosomoides polygyrus. Inflammatory Bowel Diseases. 16: 1841-9. PMID 20848461 DOI: 10.1002/Ibd.21299  0.325
2010 Aronoff DM, Thelen T, Walk ST, Petersen K, Jackson J, Grossman S, Rudrik J, Newton DW, Chenoweth CE. Pseudo-outbreak of Clostridium sordellii infection following probable cross-contamination in a hospital clinical microbiology laboratory. Infection Control and Hospital Epidemiology. 31: 640-2. PMID 20412011 DOI: 10.1086/652774  0.403
2010 Oaks JL, Besser TE, Walk ST, Gordon DM, Beckmen KB, Burek KA, Haldorson GJ, Bradway DS, Ouellette L, Rurangirwa FR, Davis MA, Dobbin G, Whittam TS. Escherichia albertii in wild and domestic birds. Emerging Infectious Diseases. 16: 638-46. PMID 20350378 DOI: 10.3201/Eid1604.090695  0.622
2009 Walk ST, Alm EW, Gordon DM, Ram JL, Toranzos GA, Tiedje JM, Whittam TS. Cryptic lineages of the genus Escherichia. Applied and Environmental Microbiology. 75: 6534-44. PMID 19700542 DOI: 10.1128/Aem.01262-09  0.598
2009 Walk ST, Xu G, Stull JW, Rich SM. Correlation between tick density and pathogen endemicity, New Hampshire. Emerging Infectious Diseases. 15: 585-7. PMID 19331738 DOI: 10.3201/Eid1504.080940  0.337
2008 Walk ST, Young VB. Emerging Insights into Antibiotic-Associated Diarrhea and Clostridium difficile Infection through the Lens of Microbial Ecology. Interdisciplinary Perspectives On Infectious Diseases. 2008: 125081. PMID 19277109 DOI: 10.1155/2008/125081  0.401
2007 Walk ST, Mladonicky JM, Middleton JA, Heidt AJ, Cunningham JR, Bartlett P, Sato K, Whittam TS. Influence of antibiotic selection on genetic composition of Escherichia coli populations from conventional and organic dairy farms. Applied and Environmental Microbiology. 73: 5982-9. PMID 17704272 DOI: 10.1128/Aem.00709-07  0.577
2007 Walk ST, Alm EW, Calhoun LM, Mladonicky JM, Whittam TS. Genetic diversity and population structure of Escherichia coli isolated from freshwater beaches. Environmental Microbiology. 9: 2274-88. PMID 17686024 DOI: 10.1111/J.1462-2920.2007.01341.X  0.604
2006 Saeed AM, Walk ST, Arshad M, Whittam TS. Clonal structure and variation in virulence of Salmonella enteritidis isolated from mice, chickens, and humans. Journal of Aoac International. 89: 504-11. PMID 16640300 DOI: 10.1093/Jaoac/89.2.504  0.624
2005 Large TM, Walk ST, Whittam TS. Variation in acid resistance among shiga toxin-producing clones of pathogenic Escherichia coli. Applied and Environmental Microbiology. 71: 2493-500. PMID 15870339 DOI: 10.1128/Aem.71.5.2493-2500.2005  0.548
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