Jerilyn A. Timlin, Ph.D. - Publications

Affiliations: 
2000 University of Michigan, Ann Arbor, Ann Arbor, MI 
Area:
Raman spectroscopy and spectroscopically resolved two and three dimensional imaging to chemical and biomedical problems, high speed video microscopy

51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Anthony S, Carroll-Portillo A, Timlin J. Dynamics and Interactions of Individual Proteins in the Membrane of Single, Living Cells. Methods in Molecular Biology (Clifton, N.J.). 1346: 185-207. PMID 26542723 DOI: 10.1007/978-1-4939-2987-0_13  1
2015 Toomey MB, Collins AM, Frederiksen R, Cornwall MC, Timlin JA, Corbo JC. A complex carotenoid palette tunes avian colour vision. Journal of the Royal Society, Interface / the Royal Society. 12. PMID 26446559 DOI: 10.1098/rsif.2015.0563  1
2015 Kent MS, Avina IC, Rader N, Busse ML, George A, Sathitsuksanoh N, Baidoo E, Timlin J, Giron NH, Celina MC, Martin LE, Polsky R, Chavez VH, Huber DL, Keasling JD, et al. Assay for lignin breakdown based on lignin films: insights into the Fenton reaction with insoluble lignin Green Chemistry. 17: 4830-4845. DOI: 10.1039/c5gc01083g  1
2014 Reichardt TA, Collins AM, McBride RC, Behnke CA, Timlin JA. Spectroradiometric monitoring for open outdoor culturing of algae and cyanobacteria. Applied Optics. 53: F31-45. PMID 25321139 DOI: 10.1364/AO.53.000F31  1
2014 Collins AM, Jones HD, McBride RC, Behnke C, Timlin JA. Host cell pigmentation in Scenedesmus dimorphus as a beacon for nascent parasite infection. Biotechnology and Bioengineering. 111: 1748-57. PMID 24931928 DOI: 10.1002/bit.25235  1
2014 Hanson DT, Collins AM, Jones HD, Roesgen J, Lopez-Nieves S, Timlin JA. On-line stable isotope gas exchange reveals an inducible but leaky carbon concentrating mechanism in Nannochloropsis salina. Photosynthesis Research. 121: 311-22. PMID 24844569 DOI: 10.1007/s11120-014-0001-0  1
2014 Davis RW, Jones HDT, Collins AM, Ricken JB, Sinclair MB, Timlin JA, Singh S. Label-free measurement of algal triacylglyceride production using fluorescence hyperspectral imaging Algal Research. 5: 181-189. DOI: 10.1016/j.algal.2013.11.010  1
2013 Liberton M, Collins AM, Page LE, O'Dell WB, O'Neill H, Urban VS, Timlin JA, Pakrasi HB. Probing the consequences of antenna modification in cyanobacteria. Photosynthesis Research. 118: 17-24. PMID 24132812 DOI: 10.1007/s11120-013-9940-0  1
2013 Kilcrease J, Collins AM, Richins RD, Timlin JA, O'Connell MA. Multiple microscopic approaches demonstrate linkage between chromoplast architecture and carotenoid composition in diverse Capsicum annuum fruit. The Plant Journal : For Cell and Molecular Biology. 76: 1074-83. PMID 24118159 DOI: 10.1111/tpj.12351  1
2013 Lee YK, Chen W, Shen H, Han D, Li Y, Jones HDT, Timlin JA, Hu Q. Basic Culturing and Analytical Measurement Techniques Handbook of Microalgal Culture: Applied Phycology and Biotechnology. 37-68. DOI: 10.1002/9781118567166.ch3  1
2013 Reichardt TA, Collins AM, Timlin JA, McBride RC, Behnke CA. Spectroradiometric monitoring of open algal cultures Cleo: Applications and Technology, Cleo_at 2013. ATh1I.7.  1
2012 Aaron JS, Carson BD, Timlin JA. Characterization of differential Toll-like receptor responses below the optical diffraction limit. Small (Weinheim An Der Bergstrasse, Germany). 8: 3041-9. PMID 22807232 DOI: 10.1002/smll.201200106  1
2012 Collins AM, Liberton M, Jones HD, Garcia OF, Pakrasi HB, Timlin JA. Photosynthetic pigment localization and thylakoid membrane morphology are altered in Synechocystis 6803 phycobilisome mutants. Plant Physiology. 158: 1600-9. PMID 22331410 DOI: 10.1104/pp.111.192849  1
2012 Jones HDT, Haaland DM, Sinclair MB, Melgaard DK, Collins AM, Timlin JA. Preprocessing strategies to improve MCR analyses of hyperspectral images Chemometrics and Intelligent Laboratory Systems. 117: 149-158. DOI: 10.1016/j.chemolab.2012.01.011  1
2012 Reichardt TA, Collins AM, Garcia OF, Ruffing AM, Jones HDT, Timlin JA. Spectroradiometric Monitoring of Nannochloropsis salina Growth Algal Research. 1: 22-31. DOI: 10.1016/j.algal.2011.12.001  1
2011 Collins AM, Jones HD, Han D, Hu Q, Beechem TE, Timlin JA. Carotenoid distribution in living cells of Haematococcus pluvialis (Chlorophyceae). Plos One. 6: e24302. PMID 21915307 DOI: 10.1371/journal.pone.0024302  1
2011 Aaron JS, Greene AC, Kotula PG, Bachand GD, Timlin JA. Advanced optical imaging reveals the dependence of particle geometry on interactions between CdSe quantum dots and immune cells. Small (Weinheim An Der Bergstrasse, Germany). 7: 334-41. PMID 21294262 DOI: 10.1002/smll.201001619  1
2011 Aaron JS, Carson BD, Timlin JA. Simultaneous, dual-color STORM imaging of membrane reorganization during early immune response Optics Infobase Conference Papers 1
2010 Spendier K, Carroll-Portillo A, Lidke KA, Wilson BS, Timlin JA, Thomas JL. Distribution and dynamics of rat basophilic leukemia immunoglobulin E receptors (FcepsilonRI) on planar ligand-presenting surfaces. Biophysical Journal. 99: 388-97. PMID 20643056 DOI: 10.1016/j.bpj.2010.04.029  1
2010 Davis RW, Timlin JA, Kaiser JN, Sinclair MB, Jones HD, Lane TW. Accurate detection of low levels of fluorescence emission in autofluorescent background: francisella-infected macrophage cells. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 16: 478-87. PMID 20569528 DOI: 10.1017/S1431927610000322  1
2010 Carroll-Portillo A, Spendier K, Pfeiffer J, Griffiths G, Li H, Lidke KA, Oliver JM, Lidke DS, Thomas JL, Wilson BS, Timlin JA. Formation of a mast cell synapse: Fc epsilon RI membrane dynamics upon binding mobile or immobilized ligands on surfaces. Journal of Immunology (Baltimore, Md. : 1950). 184: 1328-38. PMID 20042583 DOI: 10.4049/jimmunol.0903071  1
2010 Davis RW, Aaron JS, Rempe SL, Timlin JA. Fluorescence fluctuation analysis of mixed chromophores from a line-scanning hyperspectral imaging system Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7570. DOI: 10.1117/12.842294  1
2009 Thomas EV, Phillippy KH, Brahamsha B, Haaland DM, Timlin JA, Elbourne LD, Palenik B, Paulsen IT. Statistical analysis of microarray data with replicated spots: a case study with synechococcus WH8102. Comparative and Functional Genomics. 950171. PMID 19404483 DOI: 10.1155/2009/950171  1
2009 Aaron JS, Carroll-Portillo A, Pfeiffer JR, Wilson BS, Timlin JA. Imaging adaptive immune response in single cells using TIRF microscopy Microscopy and Microanalysis. 15: 858-859. DOI: 10.1017/S1431927609095476  1
2009 Timlin JA, Martin LE, Lyons CR, Hjelle B, Alam MK. Dynamics of cellular activation as revealed by attenuated total reflectance infrared spectroscopy Vibrational Spectroscopy. 50: 78-85. DOI: 10.1016/j.vibspec.2008.07.017  1
2008 Vermaas WF, Timlin JA, Jones HD, Sinclair MB, Nieman LT, Hamad SW, Melgaard DK, Haaland DM. In vivo hyperspectral confocal fluorescence imaging to determine pigment localization and distribution in cyanobacterial cells. Proceedings of the National Academy of Sciences of the United States of America. 105: 4050-5. PMID 18316743 DOI: 10.1073/pnas.0708090105  1
2008 Timlin JA, Noek RM, Kaiser JN, Sinclair MB, Jones HDT, Davis RW, Lane TW. Accurate measurement of cellular autofluorescence is critical for imaging of host-pathogen interactions Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6859. DOI: 10.1117/12.763915  1
2008 Noek RM, Jones HDT, Poulter GA, Timlin JA. Spectral image aberration correction using image transformations Microscopy and Microanalysis. 14: 600-601. DOI: 10.1017/S1431927608088144  1
2008 Carroll-Portillo A, Noek RM, Carson B, Rebeil R, Timlin JA. Spatial and temporal interactions of TLR4 pathway membrane components revealed by total internal reflection fluorescence (TIRF) microscopy Microscopy and Microanalysis. 14: 1510-1511. DOI: 10.1017/S143192760808803X  1
2008 Riley Z, Byrnes E, Parry S, Smith S, Dee N, Timlin J, Jones A, Jeromin A. Quantum dot (Qdot) labeling of gene expression in fresh frozen brain tissue using high-throughput in situ hybridization Technical Proceedings of the 2008 Nsti Nanotechnology Conference and Trade Show, Nsti-Nanotech, Nanotechnology 2008. 2: 479.  1
2007 Sutherland VL, Timlin JA, Nieman LT, Guzowski JF, Chawla MK, Worley PF, Roysam B, McNaughton BL, Sinclair MB, Barnes CA. Advanced imaging of multiple mRNAs in brain tissue using a custom hyperspectral imager and multivariate curve resolution. Journal of Neuroscience Methods. 160: 144-8. PMID 17049619 DOI: 10.1016/j.jneumeth.2006.08.018  1
2006 Timlin JA. Scanning microarrays: current methods and future directions. Methods in Enzymology. 411: 79-98. PMID 16939787 DOI: 10.1016/S0076-6879(06)11006-X  1
2006 Sinclair MB, Haaland DM, Timlin JA, Jones HD. Hyperspectral confocal microscope. Applied Optics. 45: 6283-91. PMID 16892134 DOI: 10.1364/AO.45.006283  1
2006 Timlin JA, Nieman LT, Jones HDT, Sinclair MB, Haaland DM, Guzowski JF. Imaging multiple endogenous and exogenous fluorescent species in cells and tissues Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6088. DOI: 10.1117/12.647228  1
2006 Nieman LT, Sinclair MB, Timlin JA, Jones HDT, Haaland DM. Hyperspectral imaging system for quantitative identification and discrimination of fluorescent labels in the presence of autofluorescence 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 1288-1291.  1
2005 Guzowski JF, Timlin JA, Roysam B, McNaughton BL, Worley PF, Barnes CA. Mapping behaviorally relevant neural circuits with immediate-early gene expression. Current Opinion in Neurobiology. 15: 599-606. PMID 16150584 DOI: 10.1016/j.conb.2005.08.018  1
2005 Timlin JA, Haaland DM, Sinclair MB, Aragon AD, Martinez MJ, Werner-Washburne M. Hyperspectral microarray scanning: impact on the accuracy and reliability of gene expression data. Bmc Genomics. 6: 72. PMID 15888208 DOI: 10.1186/1471-2164-6-72  1
2004 Sinclair MB, Timlin JA, Haaland DM, Werner-Washburne M. Design, construction, characterization, and application of a hyperspectral microarray scanner. Applied Optics. 43: 2079-88. PMID 15074416 DOI: 10.1364/AO.43.002079  1
2004 Alam MK, Timlin JA, Martin LE, Williams D, Lyons CR, Garrison K, Hjelle B. Spectroscopic evaluation of living murine macrophage cells before and after activation using attenuated total reflectance infrared spectroscopy Vibrational Spectroscopy. 34: 3-11. DOI: 10.1016/j.vibspec.2003.07.002  1
2004 Timlin JA, Sinclair MB, Haaland DM, Martinez MJ, Manginell M, Brozik SM, Guzowski JF, Werner-Washburne M. Hyperspectral imaging of biological targets: The difference a high resolution spectral dimension and multivariate analysis can make 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 2: 1529-1532.  1
2003 Martinez MJ, Aragon AD, Rodriguez AL, Weber JM, Timlin JA, Sinclair MB, Haaland DM, Werner-Washburne M. Identification and removal of contaminating fluorescence from commercial and in-house printed DNA microarrays. Nucleic Acids Research. 31: e18. PMID 12582263  1
2003 Haaland DM, Timlin JA, Sinclair MB, Van Benthem MH, Martinez MJ, Aragon AD, Werner-Washburne M. Multivariate curve resolution for hyperspectral image analysis: Applications to microarray technology Proceedings of Spie - the International Society For Optical Engineering. 4959: 55-66. DOI: 10.1117/12.477945  1
2002 Heffelfinger GS, Martino A, Gorin A, Xu Y, Rintoul MD, Geist A, Al-Hashimi HM, Davidson GS, Faulon JL, Frink LJ, Haaland DM, Hart WE, Jakobsson E, Lane T, Li M, ... ... Timlin JA, et al. Carbon sequestration in Synechococcus Sp.: from molecular machines to hierarchical modeling. Omics : a Journal of Integrative Biology. 6: 305-30. PMID 12626091 DOI: 10.1089/153623102321112746  1
2002 Keenan MR, Timlin JA, Van Benthem MH, Haaland DM. Algorithms for constrained linear unmixing with application to the hyperspectral analysis of fluorophore mixtures Proceedings of Spie - the International Society For Optical Engineering. 4816: 193-202. DOI: 10.1117/12.451662  1
2001 Timlin JA, Martin LE, Alam MK, Haaland DM, Garrison KA, Lyons CR, Hjelle B. Infrared ATR: A probe for cellular activation Proceedings of Spie - the International Society For Optical Engineering. 4577: 40-48. DOI: 10.1117/12.455749  1
2000 Timlin JA, Carden A, Morris MD, Rajachar RM, Kohn DH. Raman spectroscopic imaging markers for fatigue-related microdamage in bovine bone. Analytical Chemistry. 72: 2229-36. PMID 10845368 DOI: 10.1021/ac9913560  1
2000 Morris MD, Timlin JA, Carden A, Tarnowski CP, Edwards CM. Multivariate data reduction techniques for hyperspectral Raman imaging Proceedings of Spie - the International Society For Optical Engineering. 3920: 151-158.  1
2000 Morris MD, Tarnowski CP, Timlin JA, Carden A, Dreier JL, Ignelzi MA, Lin DL, Keller ET. Raman imaging as a probe of chemical and biomechanical properties of bone tissue Proceedings of Spie - the International Society For Optical Engineering. 3918: 2-8.  1
1999 Timlin JA, Carden A, Morris MD, Bonadio JF, Hoffler CE, Kozloff KM, Goldstein SA. Spatial distribution of phosphate species in mature and newly generated Mammalian bone by hyperspectral Raman imaging. Journal of Biomedical Optics. 4: 28-34. PMID 23015166 DOI: 10.1117/1.429918  1
1999 Timlin JA, Carden A, Morris MD. Chemical microstructure of cortical bone probed by Raman transects Applied Spectroscopy. 53: 1429-1435.  1
1999 Carden A, Timlin JA, Edwards CM, Morris MD, Hoffler CE, Kozloff K, Goldstein SA. Raman imaging of bone mineral and matrix: Composition and function Proceedings of Spie - the International Society For Optical Engineering. 3608: 132-138.  1
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