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Yangming Wang, Ph.D. - Publications

Affiliations: 
2006 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
DNA as a catalyst
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Huang W, Xiong T, Zhao Y, Heng J, Han G, Wang P, Zhao Z, Shi M, Li J, Wang J, Wu Y, Liu F, Xi JJ, Wang Y, Zhang QC. Computational prediction and experimental validation identify functionally conserved lncRNAs from zebrafish to human. Nature Genetics. PMID 38195860 DOI: 10.1038/s41588-023-01620-7  0.459
2023 Shi F, Zhang K, Cheng Q, Che S, Zhi S, Yu Z, Liu F, Duan F, Wang Y, Yang N. Molecular mechanism governing RNA-binding property of mammalian TRIM71 protein. Science Bulletin. PMID 38036331 DOI: 10.1016/j.scib.2023.11.041  0.621
2023 Huang R, Liu J, Chen X, Zhi Y, Ding S, Ming J, Li Y, Wang Y, Na J. A long non-coding RNA LncSync regulates mouse cardiomyocyte homeostasis and cardiac hypertrophy through coordination of miRNA actions. Protein & Cell. 14: 153-157. PMID 36929003 DOI: 10.1093/procel/pwac019  0.356
2022 Wang G, Du Y, Ma X, Ye F, Qin Y, Wang Y, Xiang Y, Tao R, Chen T. Thermophilic Nucleic Acid Polymerases and Their Application in Xenobiology. International Journal of Molecular Sciences. 23. PMID 36499296 DOI: 10.3390/ijms232314969  0.414
2022 Hu LF, Li YX, Wang JZ, Zhao YT, Wang Y. Controlling CRISPR-Cas9 by guide RNA engineering. Wiley Interdisciplinary Reviews. Rna. e1731. PMID 35393779 DOI: 10.1002/wrna.1731  0.613
2021 Zhao YT, Wang Y. Monitoring the promoter activity of long noncoding RNAs and stem cell differentiation through knock-in of sgRNA flanked by tRNA in an intron. Cell Discovery. 7: 45. PMID 34127653 DOI: 10.1038/s41421-021-00272-3  0.491
2020 Guo CJ, Ma XK, Xing YH, Zheng CC, Xu YF, Shan L, Zhang J, Wang S, Wang Y, Carmichael GG, Yang L, Chen LL. Distinct Processing of lncRNAs Contributes to Non-conserved Functions in Stem Cells. Cell. PMID 32259487 DOI: 10.1016/J.Cell.2020.03.006  0.321
2019 Li YP, Duan FF, Zhao YT, Gu KL, Liao LQ, Su HB, Hao J, Zhang K, Yang N, Wang Y. A TRIM71 binding long noncoding RNA Trincr1 represses FGF/ERK signaling in embryonic stem cells. Nature Communications. 10: 1368. PMID 30911006 DOI: 10.1038/S41467-019-08911-W  0.479
2019 Wang XW, Hu LF, Hao J, Liao LQ, Chiu YT, Shi M, Wang Y. A microRNA-inducible CRISPR-Cas9 platform serves as a microRNA sensor and cell-type-specific genome regulation tool. Nature Cell Biology. PMID 30804503 DOI: 10.1038/S41556-019-0292-7  0.345
2018 Wu DR, Gu KL, Yu JC, Fu X, Wang XW, Guo WT, Liao LQ, Zhu H, Zhang XS, Hui J, Wang Y. Opposing roles of miR-294 and MBNL1/2 in shaping the gene regulatory network of embryonic stem cells. Embo Reports. PMID 29735517 DOI: 10.15252/Embr.201745657  0.309
2018 Bao X, Guo X, Yin M, Tariq M, Lai Y, Kanwal S, Zhou J, Li N, Lv Y, Pulido-Quetglas C, Wang X, Ji L, Khan MJ, Zhu X, Luo Z, ... ... Wang Y, et al. Capturing the interactome of newly transcribed RNA. Nature Methods. PMID 29431736 DOI: 10.1038/Nmeth.4595  0.703
2017 Wang XW, Hao J, Guo WT, Liao LQ, Huang SY, Guo X, Bao X, Esteban MA, Wang Y. A DGCR8-Independent Stable MicroRNA Expression Strategy Reveals Important Functions of miR-290 and miR-183-182 Families in Mouse Embryonic Stem Cells. Stem Cell Reports. PMID 28988987 DOI: 10.1016/J.Stemcr.2017.08.027  0.32
2017 Jiang L, Shao C, Wu QJ, Chen G, Zhou J, Yang B, Li H, Gou LT, Zhang Y, Wang Y, Yeo GW, Zhou Y, Fu XD. NEAT1 scaffolds RNA-binding proteins and the Microprocessor to globally enhance pri-miRNA processing. Nature Structural & Molecular Biology. PMID 28846091 DOI: 10.1038/Nsmb.3455  0.515
2017 Hao J, Duan FF, Wang Y. MicroRNAs and RNA binding protein regulators of microRNAs in the control of pluripotency and reprogramming. Current Opinion in Genetics & Development. 46: 95-103. PMID 28753462 DOI: 10.1016/J.Gde.2017.07.001  0.352
2015 Li YP, Wang Y. Large noncoding RNAs are promising regulators in embryonic stem cells. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 42: 99-105. PMID 25819086 DOI: 10.1016/J.Jgg.2015.02.002  0.473
2014 Guo WT, Wang XW, Wang Y. Micro-management of pluripotent stem cells. Protein & Cell. 5: 36-47. PMID 24470117 DOI: 10.1007/S13238-013-0014-Z  0.34
2011 Wang Y, Blelloch R. Cell cycle regulation by microRNAs in stem cells. Results and Problems in Cell Differentiation. 53: 459-72. PMID 21630156 DOI: 10.1007/978-3-642-19065-0_19  0.319
2009 Wang Y, Blelloch R. Cell cycle regulation by MicroRNAs in embryonic stem cells. Cancer Research. 69: 4093-6. PMID 19435891 DOI: 10.1158/0008-5472.Can-09-0309  0.325
2008 Babiarz JE, Ruby JG, Wang Y, Bartel DP, Blelloch R. Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs. Genes & Development. 22: 2773-85. PMID 18923076 DOI: 10.1101/Gad.1705308  0.616
2007 Wang Y, Medvid R, Melton C, Jaenisch R, Blelloch R. DGCR8 is essential for microRNA biogenesis and silencing of embryonic stem cell self-renewal. Nature Genetics. 39: 380-5. PMID 17259983 DOI: 10.1038/Ng1969  0.396
2006 Wang Y, Silverman SK. Experimental tests of two proofreading mechanisms for 5'-splice site selection. Acs Chemical Biology. 1: 316-24. PMID 17163761 DOI: 10.1021/Cb6001569  0.769
2006 Wang Y, Silverman SK. Efficient RNA 5'-adenylation by T4 DNA ligase to facilitate practical applications. Rna (New York, N.Y.). 12: 1142-6. PMID 16618967 DOI: 10.1261/Rna.33106  0.773
2006 Zelin E, Wang Y, Silverman SK. Adenosine is inherently favored as the branch-site RNA nucleotide in a structural context that resembles natural RNA splicing. Biochemistry. 45: 2767-71. PMID 16503631 DOI: 10.1021/Bi052499L  0.77
2006 Wang Y, Silverman SK. A general two-step strategy to synthesize lariat RNAs. Rna (New York, N.Y.). 12: 313-21. PMID 16373486 DOI: 10.1261/Rna.2259406  0.791
2005 Wang Y, Silverman SK. Efficient one-step synthesis of biologically related lariat RNAs by a deoxyribozyme. Angewandte Chemie (International Ed. in English). 44: 5863-6. PMID 16086354 DOI: 10.1002/Anie.200501643  0.809
2005 Pratico ED, Wang Y, Silverman SK. A deoxyribozyme that synthesizes 2',5'-branched RNA with any branch-site nucleotide. Nucleic Acids Research. 33: 3503-12. PMID 15967808 DOI: 10.1093/Nar/Gki656  0.75
2005 Wang Y, Silverman SK. Directing the outcome of deoxyribozyme selections to favor native 3'-5' RNA ligation. Biochemistry. 44: 3017-23. PMID 15723545 DOI: 10.1021/Bi0478291  0.789
2003 Wang Y, Silverman SK. Characterization of deoxyribozymes that synthesize branched RNA. Biochemistry. 42: 15252-63. PMID 14690435 DOI: 10.1021/Bi0355847  0.726
2003 Wang Y, Silverman SK. Deoxyribozymes that synthesize branched and lariat RNA. Journal of the American Chemical Society. 125: 6880-1. PMID 12783536 DOI: 10.1021/Ja035150Z  0.805
2003 Flynn-Charlebois A, Wang Y, Prior TK, Rashid I, Hoadley KA, Coppins RL, Wolf AC, Silverman SK. Deoxyribozymes with 2'-5' RNA ligase activity. Journal of the American Chemical Society. 125: 2444-54. PMID 12603132 DOI: 10.1021/Ja028774Y  0.754
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