Edward J. Merino, Ph.D. - Related publications

2005 University of North Carolina, Chapel Hill, Chapel Hill, NC 
Structural and Chemical Biology of the Transcriptome
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Boucher D, Kariawasam R, Burgess J, Gimenez A, Ocampo TE, Ferguson B, Naqi A, Walker GJ, Bolderson E, Gamsjaeger R, O'Byrne KJ, Cubeddu L, Khanna KK, Richard DJ. hSSB2 (NABP1) is required for the recruitment of RPA during the cellular response to DNA UV damage. Scientific Reports. 11: 20256. PMID 34642383 DOI: 10.1038/s41598-021-99355-0   
2021 Pappalardi MB, Keenan K, Cockerill M, Kellner WA, Stowell A, Sherk C, Wong K, Pathuri S, Briand J, Steidel M, Chapman P, Groy A, Wiseman AK, McHugh CF, Campobasso N, et al. Discovery of a first-in-class reversible DNMT1-selective inhibitor with improved tolerability and efficacy in acute myeloid leukemia. Nature Cancer. 2: 1002-1017. PMID 34790902   
2021 Balanikas E, Banyasz A, Baldacchino G, Markovitsi D. Deprotonation Dynamics of Guanine Radical Cations. Photochemistry and Photobiology. PMID 34653259 DOI: 10.1111/php.13540   
2021 Park SH, Kim Y, Ra JS, Wie MW, Kang MS, Kang S, Myung K, Lee KY. Timely termination of repair DNA synthesis by ATAD5 is important in oxidative DNA damage-induced single-strand break repair. Nucleic Acids Research. PMID 34718749 DOI: 10.1093/nar/gkab999   
2021 Jayme CC, Pires AF, Fernandes DS, Bi H, Tedesco AC. DNA polymer films used as drug delivery systems to early-stage diagnose and treatment of breast cancer using 3D tumor spheroids as a model. Photodiagnosis and Photodynamic Therapy. 102575. PMID 34628073 DOI: 10.1016/j.pdpdt.2021.102575   
2021 Ko JC, Chen JC, Wei CL, Liu LL, Chien CC, Huang IH, Hsieh JM, Chiang CS, Tseng PY, Cheng HH, Tsao YC, Lin YW. Downregulation of p38 MAPK Activation and Radiation-Sensitive 52 Expression Enhances 5-Fluorouracil and Erlotinib-Induced Cytotoxicity in Human Lung Squamous Cells. Pharmacology. 106: 623-636. PMID 34753130 DOI: 10.1159/000518830   
2021 Huwaidi A, Kumari B, Robert G, Guérin B, Sanche L, Wagner JR. Profiling DNA Damage Induced by the Irradiation of DNA with Gold Nanoparticles. The Journal of Physical Chemistry Letters. 12: 9947-9954. PMID 34617774 DOI: 10.1021/acs.jpclett.1c02598   
2021 Nitiss JL, Kiianitsa K, Sun Y, Nitiss KC, Maizels N. Topoisomerase Assays. Current Protocols. 1: e250. PMID 34606690 DOI: 10.1002/cpz1.250   
2021 Barcena-Varela M, Lujambio A. A Novel Long Noncoding RNA Finetunes the DNA Damage Response in Hepatocellular Carcinoma. Cancer Research. 81: 4899-4900. PMID 34598999 DOI: 10.1158/0008-5472.CAN-21-2776   
2021 Ma W, Zhan Y, Zhang Y, Mao C, Xie X, Lin Y. The biological applications of DNA nanomaterials: current challenges and future directions. Signal Transduction and Targeted Therapy. 6: 351. PMID 34620843 DOI: 10.1038/s41392-021-00727-9   
2021 Meng Z, Wang L, Liao Y, Peng Z, Li D, Zhou X, Liu S, Li Y, Nüssler AK, Liu L, Hao L, Yang W. The Protective Effect of Heme Oxygenase-1 on Liver Injury Caused by DON-Induced Oxidative Stress and Cytotoxicity. Toxins. 13. PMID 34679025 DOI: 10.3390/toxins13100732   
2021 Hossain MA, Lin Y, Driscoll G, Li J, McMahon A, Matos J, Zhao H, Tsuchimoto D, Nakabeppu Y, Zhao J, Yan S. APE2 Is a General Regulator of the ATR-Chk1 DNA Damage Response Pathway to Maintain Genome Integrity in Pancreatic Cancer Cells. Frontiers in Cell and Developmental Biology. 9: 738502. PMID 34796173 DOI: 10.3389/fcell.2021.738502   
2021 Kumari S, Sharma S, Advani D, Khosla A, Kumar P, Ambasta RK. Unboxing the molecular modalities of mutagens in cancer. Environ Sci Pollut Res Int.. PMID 34611806 DOI: doi: 10.1007/s11356-021-16726-w   
2021 Cooper KL, Volk LB, Dominguez DR, Duran AD, Ke Jian Liu KJ, Hudson LG. Contribution of NADPH oxidase to the retention of UVR-induced DNA damage by arsenic. Toxicology and Applied Pharmacology. 115799. PMID 34798142 DOI: 10.1016/j.taap.2021.115799   
2021 Kunisky AK, Anyaeche VI, Herron RS, Park CY, Hwang HW. Shift in MSL1 alternative polyadenylation in response to DNA damage protects cancer cells from chemotherapeutic agent-induced apoptosis. Cell Reports. 37: 109815. PMID 34644577 DOI: 10.1016/j.celrep.2021.109815   
2021 Cao CH, Ling H, Han K, Lu XP, Cai MY, Cao JH, Zhou J, Xiang ZC, Chen JW, Li S, Lin JL, Duan JL, Luo J, Fang YJ, Pan ZZ, et al. PPIP5K2 promotes colorectal carcinoma pathogenesis through facilitating DNA homologous recombination repair. Oncogene. PMID 34645979 DOI: 10.1038/s41388-021-02052-5   
2021 Alemi F, Raei Sadigh A, Malakoti F, Elhaei Y, Ghaffari SH, Maleki M, Asemi Z, Yousefi B, Targhazeh N, Majidinia M. Molecular mechanisms involved in DNA repair in human cancers: An overview of PI3k/Akt signaling and PIKKs crosstalk. Journal of Cellular Physiology. PMID 34515349 DOI: 10.1002/jcp.30573   
2021 Jayaprakash KT, Hussein M, Shaffer R, Michael A, Nisbet A, Ajaz M. Folate Depletion as a Radiosensitizing Strategy for Solid Tumors. International Journal of Radiation Oncology, Biology, Physics. 111: e250. PMID 34701014 DOI: 10.1016/j.ijrobp.2021.07.835   
2021 Longinotti G, Ybarra G, Vighi S, Perandones C, Montserrat J, Yakisich JS, Grasselli M, Radrizzani M. One Step Histological Detection and Staining of the PTEN Tumor Suppressor Protein by a Single Strand DNA. Diagnostics (Basel, Switzerland). 11. PMID 33530289 DOI: 10.3390/diagnostics11020171   
2021 Kang Y, Wei C. Highly selective turn-on red fluorescence probes for visualization of the G-quadruplexes DNA in living cells. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 267: 120518. PMID 34700155 DOI: 10.1016/j.saa.2021.120518   
2021 Fogg JM, Judge AK, Stricker E, Chan HL, Zechiedrich L. Supercoiling and looping promote DNA base accessibility and coordination among distant sites. Nature Communications. 12: 5683. PMID 34584096 DOI: 10.1038/s41467-021-25936-2   
2021 Li S, Fu Z, Wang C, Shang X, Zhao Y, Liu C, Pei M. An ultrasensitive and specific electrochemical biosensor for DNA detection based on T7 exonuclease-assisted regulatory strand displacement amplification. Analytica Chimica Acta. 1183: 338988. PMID 34627518 DOI: 10.1016/j.aca.2021.338988   
2021 Ouyang P, Fang C, Han J, Zhang J, Yang Y, Qing Y, Chen Y, Shang W, Du J. A DNA Electrochemical Sensor via Terminal Protection of Small-Molecule-Linked DNA for Highly Sensitive Protein Detection. Biosensors. 11. PMID 34821667 DOI: 10.3390/bios11110451   
2021 Bisserier M, Shanmughapriya S, Rai AK, Gonzalez C, Brojakowska A, Garikipati VNS, Madesh M, Mills PJ, Walsh K, Arakelyan A, Kishore R, Hadri L, Goukassian DA. Cell-Free Mitochondrial DNA as a Potential Biomarker for Astronauts' Health. Journal of the American Heart Association. e022055. PMID 34666498 DOI: 10.1161/JAHA.121.022055   
2021 Swan RL, Cowell IG, Austin CA. . Molecular Pharmacology. PMID 34689119 DOI: 10.1124/molpharm.121.000374   
2021 Meier B, Volkova NV, Wang B, González-Huici V, Bertolini S, Campbell PJ, Gerstung M, Gartner A. C. elegans genome-wide analysis reveals DNA repair pathways that act cooperatively to preserve genome integrity upon ionizing radiation. Plos One. 16: e0258269. PMID 34614038 DOI: 10.1371/journal.pone.0258269   
2021 Al-Khateeb RS, Althagafy HS, ElAssouli MZ, Nori DA, AlFattani M, Al-Najjar SA, Al Amri T, Hashem AM, Harakeh S, Helmi N. Iron Chelation Reduces DNA Damage in Sickle Cell Anemia. Clinical and Applied Thrombosis/Hemostasis : Official Journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis. 27: 10760296211047230. PMID 34633875 DOI: 10.1177/10760296211047230   
2021 Zhang R, Lai W, Wang H. Quantification of Epigenetic DNA Modifications in the Subchromatin Structure Matrix Attachment Regions by Stable Isotope Dilution UHPLC-MS/MS Analysis. Analytical Chemistry. PMID 34783527 DOI: 10.1021/acs.analchem.1c04151   
2021 Gabriel P, Maranha FG, Nordlander E, Neves A, Terenzi H. A heterotrinuclear bioinspired coordination complex capable of binding to DNA and emulation of nuclease activity. Journal of Inorganic Biochemistry. 226: 111631. PMID 34717251 DOI: 10.1016/j.jinorgbio.2021.111631   
2021 Song W, Song P, Sun Y, Zhang Z, Zhou H, Zhang X, He P. Self-Assembly of Multifunctional DNA Nanohydrogels with Tumor Microenvironment-Responsive Cascade Reactions for Cooperative Cancer Therapy. Acs Biomaterials Science & Engineering. PMID 34704735 DOI: 10.1021/acsbiomaterials.1c00959   
2021 Zentout S, Smith R, Jacquier M, Huet S. New Methodologies to Study DNA Repair Processes in Space and Time Within Living Cells. Frontiers in Cell and Developmental Biology. 9: 730998. PMID 34589495 DOI: 10.3389/fcell.2021.730998   
2021 Thakur BL, Ray A, Redon CE, Aladjem MI. Preventing excess replication origin activation to ensure genome stability. Trends in Genetics : Tig. PMID 34625299 DOI: 10.1016/j.tig.2021.09.008   
2021 Costa PM. Current aspects of DNA damage and repair in ecotoxicology: a mini-review. Ecotoxicology (London, England). PMID 34623548 DOI: 10.1007/s10646-021-02487-2   
2021 Draxler A, Franzke B, Cortolezis JT, Gillies NA, Unterberger S, Aschauer R, Zöhrer PA, Bragagna L, Kodnar J, Strasser EM, Neubauer O, Sharma P, Mitchell SM, Zeng N, Ramzan F, et al. The Effect of Elevated Protein Intake on DNA Damage in Older People: Comparative Secondary Analysis of Two Randomized Controlled Trials. Nutrients. 13. PMID 34684481 DOI: 10.3390/nu13103479   
2021 Higgs EB, Godschalk R, Langie SAS, van Schooten FJ, Hodges NJ. Upregulation of mNEIL3 in Ogg1-null cells is a potential backup mechanism for 8-oxoG repair. Mutagenesis. PMID 34644377 DOI: 10.1093/mutage/geab038   
2021 Katerji M, Duerksen-Hughes PJ. DNA damage in cancer development: special implications in viral oncogenesis. American Journal of Cancer Research. 11: 3956-3979. PMID 34522461   
2021 Xue W, Dan Zhao, Zhang Q, Chang Y, Liu M. An origami paper-based analytical device for DNA damage analysis. Chemical Communications (Cambridge, England). PMID 34651618 DOI: 10.1039/d1cc05019b   
2021 Russo MT, De Luca G, Palma N, Leopardi P, Degan P, Cinelli S, Pepe G, Mosesso P, Di Carlo E, Sorrentino C, Musiani P, Crebelli R, Bignami M, Dogliotti E. Oxidative Stress, Mutations and Chromosomal Aberrations Induced by In Vitro and In Vivo Exposure to Furan. International Journal of Molecular Sciences. 22. PMID 34575853 DOI: 10.3390/ijms22189687   
2021 Yao C, Zhang R, Tang J, Yang D. Rolling circle amplification (RCA)-based DNA hydrogel. Nature Protocols. PMID 34716450 DOI: 10.1038/s41596-021-00621-2   
2021 Zhang T, Tian T, Lin Y. Functionalizing Framework Nucleic Acid-Based Nanostructures for Biomedical Application. Advanced Materials (Deerfield Beach, Fla.). e2107820. PMID 34787933 DOI: 10.1002/adma.202107820   
2021 Lyu J, Yang M, Zhang C, Luo Y, Qin T, Su Z, Huang Z. DNA nanostructures directed by RNA clamps. Nanoscale. PMID 34825903 DOI: 10.1039/d1nr03919a   
2021 Hama T, Nagesh PK, Chowdhury P, Moore BM, Yallapu MM, Regner KR, Park F. DNA damage is overcome by TRIP13 overexpression during cisplatin nephrotoxicity. Jci Insight. 6. PMID 34806647 DOI: 10.1172/jci.insight.139092   
2021 Khamari L, Pramanik S, Shekhar S, Mahato P, Mukherjee S. Preferential Binding of Epirubicin Hydrochloride with Single Nucleotide Mismatched DNA and Subsequent Sequestration by a Mixed Micelle. The Journal of Physical Chemistry. B. PMID 34652157 DOI: 10.1021/acs.jpcb.1c06944   
2021 Johnson KC, Anderson KJ, Courtois ET, Gujar AD, Barthel FP, Varn FS, Luo D, Seignon M, Yi E, Kim H, Estecio MRH, Zhao D, Tang M, Navin NE, Maurya R, et al. Single-cell multimodal glioma analyses identify epigenetic regulators of cellular plasticity and environmental stress response. Nature Genetics. PMID 34594038 DOI: 10.1038/s41588-021-00926-8   
2021 Zou RS, Ha T. Light activation and deactivation of Cas9 for DNA repair studies. Methods in Enzymology. 661: 219-249. PMID 34776214 DOI: 10.1016/bs.mie.2021.08.007   
2021 Ge J, Qiu X. Expression, purification, characterization of DNA binding activity and crystallization of a putative type II DNA Cytosine-5-methyltransferase from Microcystis aeruginosa. Protein Expression and Purification. 189: 105988. PMID 34634480 DOI: 10.1016/j.pep.2021.105988   
2021 Miura T, Onodera R, Terashima J, Ozawa S, Habano W. β-naphthoflavone-induced upregulation of expression is mediated by the preferential binding of aryl hydrocarbon receptor to unmethylated xenobiotic responsive elements. Experimental and Therapeutic Medicine. 22: 1410. PMID 34676003 DOI: 10.3892/etm.2021.10846   
2021 Cantor SB. Revisiting the BRCA-pathway through the lens of replication gap suppression: "Gaps determine therapy response in BRCA mutant cancer". Dna Repair. 107: 103209. PMID 34419699 DOI: 10.1016/j.dnarep.2021.103209   
2021 Zhang J, Fakharzadeh A, Pan F, Roland C, Sagui C. Construction of DNA/RNA Triplex Helices Based on GAA/TTC Trinucleotide Repeats. Bio-Protocol. 11: e4155. PMID 34692905 DOI: 10.21769/BioProtoc.4155   
2021 Zhou W, Cheng Y, Song B, Hao J, Miao W, Jia G, Li C. Cationic Porphyrin-Mediated G-Quadruplex DNA Oxidative Damage: Regulated by the Initial Interplay between DNA and TMPyP4. Biochemistry. PMID 34757721 DOI: 10.1021/acs.biochem.1c00557