Arun K. Ramani, Ph.D. - Publications

Affiliations: 
2005 University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
proteomics, bioinformatics, systems biology

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Norris AD, Gao S, Norris ML, Ray D, Ramani AK, Fraser AG, Morris Q, Hughes TR, Zhen M, Calarco JA. A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types. Molecular Cell. 54: 946-59. PMID 24910101 DOI: 10.1016/j.molcel.2014.05.004  0.96
2014 Verster AJ, Ramani AK, McKay SJ, Fraser AG. Comparative RNAi screens in C. elegans and C. briggsae reveal the impact of developmental system drift on gene function. Plos Genetics. 10: e1004077. PMID 24516395 DOI: 10.1371/journal.pgen.1004077  0.96
2012 Ramani AK, Chuluunbaatar T, Verster AJ, Na H, Vu V, Pelte N, Wannissorn N, Jiao A, Fraser AG. The majority of animal genes are required for wild-type fitness. Cell. 148: 792-802. PMID 22341449 DOI: 10.1016/j.cell.2012.01.019  0.96
2011 Ramani AK, Calarco JA, Pan Q, Mavandadi S, Wang Y, Nelson AC, Lee LJ, Morris Q, Blencowe BJ, Zhen M, Fraser AG. Genome-wide analysis of alternative splicing in Caenorhabditis elegans. Genome Research. 21: 342-8. PMID 21177968 DOI: 10.1101/gr.114645.110  0.96
2011 Ip JY, Schmidt D, Pan Q, Ramani AK, Fraser AG, Odom DT, Blencowe BJ. Global impact of RNA polymerase II elongation inhibition on alternative splicing regulation. Genome Research. 21: 390-401. PMID 21163941 DOI: 10.1101/gr.111070.110  0.96
2009 Ramani AK, Nelson AC, Kapranov P, Bell I, Gingeras TR, Fraser AG. High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans. Genome Biology. 10: R101. PMID 19778439 DOI: 10.1186/gb-2009-10-9-r101  0.96
2008 Ramani AK, Li Z, Hart GT, Carlson MW, Boutz DR, Marcotte EM. A map of human protein interactions derived from co-expression of human mRNAs and their orthologs. Molecular Systems Biology. 4: 180. PMID 18414481 DOI: 10.1038/msb.2008.19  0.96
2007 Ramani A, Mathura VS, Zhanhua C, Kangueane P. Protein-protein interaction and macromolecular visualization Bioinformatics: a Concept-Based Introduction. 79-96. DOI: 10.1007/978-0-387-84870-9_7  0.96
2006 Hart GT, Ramani AK, Marcotte EM. How complete are current yeast and human protein-interaction networks? Genome Biology. 7: 120. PMID 17147767 DOI: 10.1186/gb-2006-7-11-120  0.96
2005 Ramani AK, Bunescu RC, Mooney RJ, Marcotte EM. Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome. Genome Biology. 6: R40. PMID 15892868 DOI: 10.1186/gb-2005-6-5-r40  0.96
2005 Bunescu R, Ge R, Kate RJ, Marcotte EM, Mooney RJ, Ramani AK, Wong YW. Comparative experiments on learning information extractors for proteins and their interactions. Artificial Intelligence in Medicine. 33: 139-55. PMID 15811782 DOI: 10.1016/j.artmed.2004.07.016  0.96
2004 Bork P, Jensen LJ, von Mering C, Ramani AK, Lee I, Marcotte EM. Protein interaction networks from yeast to human. Current Opinion in Structural Biology. 14: 292-9. PMID 15193308 DOI: 10.1016/j.sbi.2004.05.003  0.96
2003 Ramani AK, Marcotte EM. Exploiting the co-evolution of interacting proteins to discover interaction specificity. Journal of Molecular Biology. 327: 273-84. PMID 12614624 DOI: 10.1016/S0022-2836(03)00114-1  0.96
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