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Michael E. Rothenberg, Ph.D. - Publications

Affiliations: 
2003 University of California, San Francisco, San Francisco, CA 
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23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sigal M, Reinés MDM, Müllerke S, Fischer C, Kapalczynska M, Berger H, Bakker ERM, Mollenkopf HJ, Rothenberg ME, Wiedenmann B, Sauer S, Meyer TF. R-spondin-3 induces secretory, antimicrobial Lgr5 cells in the stomach. Nature Cell Biology. PMID 31235935 DOI: 10.1038/S41556-019-0339-9  0.379
2016 Lee JJ, Rothenberg ME, Seeley ES, Zimdahl B, Kawano S, Lu WJ, Shin K, Sakata-Kato T, Chen JK, Diehn M, Clarke MF, Beachy PA. Control of inflammation by stromal Hedgehog pathway activation restrains colitis. Proceedings of the National Academy of Sciences of the United States of America. PMID 27815529 DOI: 10.1073/Pnas.1616447113  0.347
2015 Korem Y, Szekely P, Hart Y, Sheftel H, Hausser J, Mayo A, Rothenberg ME, Kalisky T, Alon U. Geometry of the Gene Expression Space of Individual Cells. Plos Computational Biology. 11: e1004224. PMID 26161936 DOI: 10.1371/Journal.Pcbi.1004224  0.369
2015 Sigal M, Rothenberg ME, Logan CY, Lee JY, Honaker RW, Cooper RL, Passarelli B, Camorlinga M, Bouley DM, Alvarez G, Nusse R, Torres J, Amieva MR. Helicobacter pylori Activates and Expands Lgr5(+) Stem Cells Through Direct Colonization of the Gastric Glands. Gastroenterology. 148: 1392-1404.e21. PMID 25725293 DOI: 10.1053/J.Gastro.2015.02.049  0.302
2015 Chen EC, Kalisky T, Gupta S, O'Brien CA, Longacre TA, van de Rijn M, Karl TA, Quake S, Clarke MF, Rothenberg ME. 531 KIT Signaling Promotes Tumor Growth in a Subset of Human Colon Cancers Gastroenterology. 148: S-106. DOI: 10.1016/S0016-5085(15)30363-2  0.36
2014 Scheeren FA, Kuo AH, van Weele LJ, Cai S, Glykofridis I, Sikandar SS, Zabala M, Qian D, Lam JS, Johnston D, Volkmer JP, Sahoo D, van de Rijn M, Dirbas FM, Somlo G, ... ... Rothenberg ME, et al. A cell-intrinsic role for TLR2-MYD88 in intestinal and breast epithelia and oncogenesis. Nature Cell Biology. 16: 1238-48. PMID 25362351 DOI: 10.1038/Ncb3058  0.338
2014 Wu AR, Neff NF, Kalisky T, Dalerba P, Treutlein B, Rothenberg ME, Mburu FM, Mantalas GL, Sim S, Clarke MF, Quake SR. Quantitative assessment of single-cell RNA-sequencing methods Nature Methods. 11: 41-46. PMID 24141493 DOI: 10.1038/Nmeth.2694  0.3
2014 Rothenberg ME, Cintra T, Chen EC, Kalisky T, Sahoo D, Mobley B, Quake S, Clarke MF. 398 Loss of Gpsm2 Disrupts Stem Cell Dynamics and Mitotic Spindle Orientation in Normal Colon and Colon Cancer Gastroenterology. 146: S-85-S-86. DOI: 10.1016/S0016-5085(14)60306-1  0.342
2013 Rothenberg ME, Sen A, Mukherjee G, Feng N, Kalisky T, Nair N, Johnstone IM, Clarke MF, Greenberg HB. 549 A Novel Approach to Understanding Viral Pathogenesis: Defining in-Vivo Rotavirus Infection of Intestinal Enterocytes At the Single Cell Level by Comparing Infected Cells, Bystanders, and Uninfected Cells Gastroenterology. 144: S-100. DOI: 10.1016/S0016-5085(13)60369-8  0.349
2012 Sen A, Rothenberg ME, Mukherjee G, Feng N, Kalisky T, Nair N, Johnstone IM, Clarke MF, Greenberg HB. Innate immune response to homologous rotavirus infection in the small intestinal villous epithelium at single-cell resolution. Proceedings of the National Academy of Sciences of the United States of America. 109: 20667-72. PMID 23188796 DOI: 10.1073/Pnas.1212188109  0.317
2012 Rothenberg ME, Nusse Y, Kalisky T, Lee JJ, Dalerba P, Scheeren F, Lobo N, Kulkarni S, Sim S, Qian D, Beachy PA, Pasricha PJ, Quake SR, Clarke MF. Identification of a cKit(+) colonic crypt base secretory cell that supports Lgr5(+) stem cells in mice. Gastroenterology. 142: 1195-1205.e6. PMID 22333952 DOI: 10.1053/J.Gastro.2012.02.006  0.44
2012 Hisamori S, Dalerba P, Shimono Y, Rothenberg ME, Zabara M, Cai S, Qian D, Clarke MF. Abstract 1012: MicroRNA-203 restricts the proliferation capacity of normal colon and colon cancer stem cells by regulating the expression of Tcf4 Cancer Research. 72: 1012-1012. DOI: 10.1158/1538-7445.Am2012-1012  0.355
2012 Rothenberg ME, Nusse Y, Kalisky T, Lee J, Dalerba PD, Czechowicz A, Scheeren F, Kulkarni S, Lobo NA, Sim S, Beachy P, Pasricha PJ, Quake S, Clarke MF. 906 CKit/CD117 Identifies a Colonic Paneth-Like Cell That Contributes to the Stem Cell Niche and Regulates Crypt Homeostasis Gastroenterology. 142: S-159. DOI: 10.1016/S0016-5085(12)60601-5  0.379
2011 Dalerba P, Kalisky T, Sahoo D, Rajendran PS, Rothenberg ME, Leyrat AA, Sim S, Okamoto J, Johnston DM, Qian D, Zabala M, Bueno J, Neff NF, Wang J, Shelton AA, et al. Single-cell dissection of transcriptional heterogeneity in human colon tumors. Nature Biotechnology. 29: 1120-7. PMID 22081019 DOI: 10.1038/Nbt.2038  0.367
2011 Rothenberg ME, Kalisky T, Dalerba PD, Nusse Y, Quake S, Clarke MF. Single Cell Gene Expression Profiling of Adult Murine Colon Provides Novel Insight Into Both the Origin of Stem Cells and Their Supportive Cell Type Gastroenterology. 140: S-13-S-14. DOI: 10.1016/S0016-5085(11)60054-1  0.415
2010 Rothenberg ME, Clarke MF, Diehn M. The Myc connection: ES cells and cancer. Cell. 143: 184-6. PMID 20946977 DOI: 10.1016/J.Cell.2010.09.046  0.38
2010 Rothenberg ME, Dalerba PD, Nusse Y, Lee J, Lobo N, Kalisky T, Leyrat A, Quake S, Beachy P, Diehn M, Clarke MF. 788 Evidence for an Evolutionarily-Conserved Mechanism Regulating Stem and Progenitor Cell Numbers in the Regenerative Response to Ulcerative Colitis Gastroenterology. 138: S-111. DOI: 10.1016/S0016-5085(10)60509-4  0.363
2003 Rothenberg ME, Jan YN. Cell biology: the hippo hypothesis. Nature. 425: 469-70. PMID 14523431 DOI: 10.1038/425469A  0.505
2003 Rothenberg ME, Rogers SL, Vale RD, Jan LY, Jan YN. Drosophila pod-1 crosslinks both actin and microtubules and controls the targeting of axons. Neuron. 39: 779-91. PMID 12948445 DOI: 10.1016/S0896-6273(03)00508-7  0.44
2002 Rothenberg ME, Jan YN. salvador--The persistence of proliferation. Cancer Cell. 2: 171-3. PMID 12242148 DOI: 10.1016/S1535-6108(02)00131-9  0.522
1999 Alexander J, Rothenberg M, Henry GL, Stainier DY. casanova plays an early and essential role in endoderm formation in zebrafish. Developmental Biology. 215: 343-57. PMID 10545242 DOI: 10.1006/Dbio.1999.9441  0.363
1998 Lu B, Rothenberg M, Jan LY, Jan YN. Partner of Numb colocalizes with Numb during mitosis and directs Numb asymmetric localization in Drosophila neural and muscle progenitors. Cell. 95: 225-35. PMID 9790529 DOI: 10.1016/S0092-8674(00)81753-5  0.606
1998 Chien CT, Wang S, Rothenberg M, Jan LY, Jan YN. Numb-associated kinase interacts with the phosphotyrosine binding domain of Numb and antagonizes the function of Numb in vivo. Molecular and Cellular Biology. 18: 598-607. PMID 9418906 DOI: 10.1128/Mcb.18.1.598  0.578
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