Theresa A. Ramelot, Ph.D. - Publications

Affiliations: 
2001 Cornell University, Ithaca, NY, United States 

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Everett J, Tejero R, Murthy SB, Acton TB, Aramini JM, Baran MC, Benach J, Cort JR, Eletsky A, Forouhar F, Guan R, Kuzin AP, Lee HW, Liu G, Mani R, ... ... Ramelot T, et al. A Community Resource of Experimental Data for NMR - X-ray Crystal Structure Pairs. Protein Science : a Publication of the Protein Society. PMID 26293815 DOI: 10.1002/pro.2774  0.88
2014 Yang Y, Ramelot TA, Lee HW, Xiao R, Everett JK, Montelione GT, Prestegard JH, Kennedy MA. Solution structure of a C-terminal fragment (175-257) of CV_0373 protein from Chromobacterium violaceum adopts a winged helix-turn-helix (wHTH) fold. Journal of Biomolecular Nmr. 60: 197-202. PMID 25270885 DOI: 10.1007/s10858-014-9860-0  0.88
2014 Yang Y, Ramelot TA, Lee HW, Xiao R, Everett JK, Montelione GT, Prestegard JH, Kennedy MA. Solution structure of the free Zα domain of human DLM-1 (ZBP1/DAI), a Z-DNA binding domain. Journal of Biomolecular Nmr. 60: 189-95. PMID 25173411 DOI: 10.1007/s10858-014-9858-7  0.88
2014 Elshahawi SI, Ramelot TA, Seetharaman J, Chen J, Singh S, Yang Y, Pederson K, Kharel MK, Xiao R, Lew S, Yennamalli RM, Miller MD, Wang F, Tong L, Montelione GT, et al. Structure-guided functional characterization of enediyne self-sacrifice resistance proteins, CalU16 and CalU19. Acs Chemical Biology. 9: 2347-58. PMID 25079510 DOI: 10.1021/cb500327m  0.88
2014 Lavery LA, Partridge JR, Ramelot TA, Elnatan D, Kennedy MA, Agard DA. Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism. Molecular Cell. 53: 330-43. PMID 24462206 DOI: 10.1016/j.molcel.2013.12.023  0.88
2014 Yang Y, Ramelot TA, Ni S, McCarrick RM, Kennedy MA. Applications of NMR-based PRE and EPR-based DEER spectroscopy to homodimer chain exchange characterization and structure determination. Methods in Molecular Biology (Clifton, N.J.). 1091: 215-27. PMID 24203336 DOI: 10.1007/978-1-62703-691-7_16  0.88
2013 Ramelot TA, Yang Y, Sahu ID, Lee HW, Xiao R, Lorigan GA, Montelione GT, Kennedy MA. NMR structure and MD simulations of the AAA protease intermembrane space domain indicates peripheral membrane localization within the hexaoligomer. Febs Letters. 587: 3522-8. PMID 24055473 DOI: 10.1016/j.febslet.2013.09.009  0.88
2013 Yang Y, Ramelot TA, Ni S, McCarrick RM, Kennedy MA. Measurement of rate constants for homodimer subunit exchange using double electron-electron resonance and paramagnetic relaxation enhancements. Journal of Biomolecular Nmr. 55: 47-58. PMID 23180051 DOI: 10.1007/s10858-012-9685-7  0.88
2012 Ramelot TA, Rossi P, Forouhar F, Lee HW, Yang Y, Ni S, Unser S, Lew S, Seetharaman J, Xiao R, Acton TB, Everett JK, Prestegard JH, Hunt JF, Montelione GT, et al. Structure of a specialized acyl carrier protein essential for lipid A biosynthesis with very long-chain fatty acids in open and closed conformations. Biochemistry. 51: 7239-49. PMID 22876860 DOI: 10.1021/bi300546b  0.88
2012 Feldmann EA, Seetharaman J, Ramelot TA, Lew S, Zhao L, Hamilton K, Ciccosanti C, Xiao R, Acton TB, Everett JK, Tong L, Montelione GT, Kennedy MA. Solution NMR and X-ray crystal structures of Pseudomonas syringae Pspto_3016 from protein domain family PF04237 (DUF419) adopt a "double wing" DNA binding motif. Journal of Structural and Functional Genomics. 13: 155-62. PMID 22865330 DOI: 10.1007/s10969-012-9140-8  0.88
2012 Yang Y, Ramelot TA, Cort JR, Garcia M, Yee A, Arrowsmith CH, Kennedy MA. Solution NMR structure of hypothetical protein CV_2116 encoded by a viral prophage element in Chromobacterium violaceum. International Journal of Molecular Sciences. 13: 7354-64. PMID 22837698 DOI: 10.3390/ijms13067354  0.88
2012 Ramelot TA, Yang Y, Xiao R, Acton TB, Everett JK, Montelione GT, Kennedy MA. Solution NMR structure of BT_0084, a conjugative transposon lipoprotein from Bacteroides thetaiotamicron. Proteins. 80: 667-70. PMID 22116783 DOI: 10.1002/prot.23235  0.88
2012 Feldmann EA, Ramelot TA, Yang Y, Xiao R, Acton TB, Everett JK, Montelione GT, Kennedy MA. Solution NMR structure of Asl3597 from Nostoc sp. PCC7120, the first structure from protein domain family PF12095, reveals a novel fold. Proteins. 80: 671-5. PMID 22113821 DOI: 10.1002/prot.23236  0.88
2011 Kryshtafovych A, Moult J, Bartual SG, Bazan JF, Berman H, Casteel DE, Christodoulou E, Everett JK, Hausmann J, Heidebrecht T, Hills T, Hui R, Hunt JF, Seetharaman J, Joachimiak A, ... ... Ramelot TA, et al. Target highlights in CASP9: Experimental target structures for the critical assessment of techniques for protein structure prediction. Proteins. 79: 6-20. PMID 22020785 DOI: 10.1002/prot.23196  0.88
2011 Yang Y, Ramelot TA, Cort JR, Wang H, Ciccosanti C, Jiang M, Janjua H, Acton TB, Xiao R, Everett JK, Montelione GT, Kennedy MA. Solution NMR structure of Dsy0195 homodimer from Desulfitobacterium hafniense: first structure representative of the YabP domain family of proteins involved in spore coat assembly. Journal of Structural and Functional Genomics. 12: 175-9. PMID 21904870 DOI: 10.1007/s10969-011-9117-z  0.88
2011 Ramelot TA, Smola MJ, Lee HW, Ciccosanti C, Hamilton K, Acton TB, Xiao R, Everett JK, Prestegard JH, Montelione GT, Kennedy MA. Solution structure of 4'-phosphopantetheine - GmACP3 from Geobacter metallireducens: a specialized acyl carrier protein with atypical structural features and a putative role in lipopolysaccharide biosynthesis. Biochemistry. 50: 1442-53. PMID 21235239 DOI: 10.1021/bi101932s  0.88
2011 Yang Y, Ramelot TA, Cort JR, Wang D, Ciccosanti C, Hamilton K, Nair R, Rost B, Acton TB, Xiao R, Everett JK, Montelione GT, Kennedy MA. Solution NMR structure of photosystem II reaction center protein Psb28 from Synechocystis sp. Strain PCC 6803. Proteins. 79: 340-4. PMID 21058299 DOI: 10.1002/prot.22876  0.88
2011 Watanabe M, Sheriff S, Ramelot TA, Kadeer N, Cho J, Lewis KB, Balasubramaniam A, Kennedy MA. NMR based metabonomics study of DAG treatment in a C2C12 mouse skeletal muscle cell line myotube model of burn-injury International Journal of Peptide Research and Therapeutics. 17: 281-299. DOI: 10.1007/s10989-011-9264-x  0.88
2010 Yang Y, Ramelot TA, McCarrick RM, Ni S, Feldmann EA, Cort JR, Wang H, Ciccosanti C, Jiang M, Janjua H, Acton TB, Xiao R, Everett JK, Montelione GT, Kennedy MA. Combining NMR and EPR methods for homodimer protein structure determination. Journal of the American Chemical Society. 132: 11910-3. PMID 20698532 DOI: 10.1021/ja105080h  0.88
2010 Raman S, Lange OF, Rossi P, Tyka M, Wang X, Aramini J, Liu G, Ramelot TA, Eletsky A, Szyperski T, Kennedy MA, Prestegard J, Montelione GT, Baker D. NMR structure determination for larger proteins using backbone-only data. Science (New York, N.Y.). 327: 1014-8. PMID 20133520 DOI: 10.1126/science.1183649  0.88
2009 Bertonati C, Punta M, Fischer M, Yachdav G, Forouhar F, Zhou W, Kuzin AP, Seetharaman J, Abashidze M, Ramelot TA, Kennedy MA, Cort JR, Belachew A, Hunt JF, Tong L, et al. Structural genomics reveals EVE as a new ASCH/PUA-related domain. Proteins. 75: 760-73. PMID 19191354 DOI: 10.1002/prot.22287  0.88
2009 Ramelot TA, Raman S, Kuzin AP, Xiao R, Ma LC, Acton TB, Hunt JF, Montelione GT, Baker D, Kennedy MA. Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study. Proteins. 75: 147-67. PMID 18816799 DOI: 10.1002/prot.22229  0.88
2008 Cort JR, Ramelot TA, Murray D, Acton TB, Ma LC, Xiao R, Montelione GT, Kennedy MA. Structure of an acetyl-CoA binding protein from Staphylococcus aureus representing a novel subfamily of GCN5-related N-acetyltransferase-like proteins. Journal of Structural and Functional Genomics. 9: 7-20. PMID 18709443 DOI: 10.1007/s10969-008-9041-z  0.88
2008 Wu B, Yee A, Huang YJ, Ramelot TA, Cort JR, Semesi A, Jung JW, Lee W, Montelione GT, Kennedy MA, Arrowsmith CH. The solution structure of ribosomal protein S17E from Methanobacterium thermoautotrophicum: a structural homolog of the FF domain. Protein Science : a Publication of the Protein Society. 17: 583-8. PMID 18218711 DOI: 10.1110/ps.073272208  0.88
2008 Wu B, Lukin J, Yee A, Lemak A, Semesi A, Ramelot TA, Kennedy MA, Arrowsmith CH. Solution structure of ribosomal protein L40E, a unique C4 zinc finger protein encoded by archaeon Sulfolobus solfataricus. Protein Science : a Publication of the Protein Society. 17: 589-96. PMID 18218710 DOI: 10.1110/ps.073273008  0.88
2007 Ramelot TA, Yee A, Cort JR, Semesi A, Arrowsmith CH, Kennedy MA. NMR structure and binding studies confirm that PA4608 from Pseudomonas aeruginosa is a PilZ domain and a c-di-GMP binding protein. Proteins. 66: 266-71. PMID 17096419 DOI: 10.1002/prot.21199  0.88
2004 Ramelot TA, Cort JR, Goldsmith-Fischman S, Kornhaber GJ, Xiao R, Shastry R, Acton TB, Honig B, Montelione GT, Kennedy MA. Solution NMR structure of the iron-sulfur cluster assembly protein U (IscU) with zinc bound at the active site. Journal of Molecular Biology. 344: 567-83. PMID 15522305 DOI: 10.1016/j.jmb.2004.08.038  0.88
2003 Wu B, Yee A, Pineda-Lucena A, Semesi A, Ramelot TA, Cort JR, Jung JW, Edwards A, Lee W, Kennedy M, Arrowsmith CH. Solution structure of ribosomal protein S28E from Methanobacterium thermoautotrophicum. Protein Science : a Publication of the Protein Society. 12: 2831-7. PMID 14627743 DOI: 10.1110/ps.03358203  0.88
2003 Ramelot TA, Cort JR, Yee AA, Semesi A, Edwards AM, Arrowsmith CH, Kennedy MA. Solution structure of the yeast ubiquitin-like modifier protein Hub1. Journal of Structural and Functional Genomics. 4: 25-30. PMID 12943364 DOI: 10.1023/A:1024674220425  0.88
2003 Ramelot TA, Ni S, Goldsmith-Fischman S, Cort JR, Honig B, Kennedy MA. Solution structure of Vibrio cholerae protein VC0424: a variation of the ferredoxin-like fold. Protein Science : a Publication of the Protein Society. 12: 1556-61. PMID 12824501 DOI: 10.1110/ps.03108103  0.88
2002 Ramelot TA, Cort JR, Yee AA, Liu F, Goshe MB, Edwards AM, Smith RD, Arrowsmith CH, Dever TE, Kennedy MA. Myxoma virus immunomodulatory protein M156R is a structural mimic of eukaryotic translation initiation factor eIF2alpha. Journal of Molecular Biology. 322: 943-54. PMID 12367520 DOI: 10.1016/S0022-2836(02)00858-6  0.88
2002 Ramelot TA, Cort JR, Yee AA, Semesi A, Edwards AM, Arrowsmith CH, Kennedy MA. NMR structure of the Escherichia coli protein YacG: a novel sequence motif in the zinc-finger family of proteins. Proteins. 49: 289-93. PMID 12211008 DOI: 10.1002/prot.10214  0.88
2002 Yee A, Chang X, Pineda-Lucena A, Wu B, Semesi A, Le B, Ramelot T, Lee GM, Bhattacharyya S, Gutierrez P, Denisov A, Lee CH, Cort JR, Kozlov G, Liao J, et al. An NMR approach to structural proteomics. Proceedings of the National Academy of Sciences of the United States of America. 99: 1825-30. PMID 11854485 DOI: 10.1073/pnas.042684599  0.88
2001 Ramelot TA, Nicholson LK. Phosphorylation-induced structural changes in the amyloid precursor protein cytoplasmic tail detected by NMR. Journal of Molecular Biology. 307: 871-84. PMID 11273707 DOI: 10.1006/jmbi.2001.4535  0.88
2000 Ramelot TA, Gentile LN, Nicholson LK. Transient structure of the amyloid precursor protein cytoplasmic tail indicates preordering of structure for binding to cytosolic factors. Biochemistry. 39: 2714-25. PMID 10704223 DOI: 10.1021/bi992580m  0.88
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