Katrine L. Whiteson, Ph.D. - Publications

2007 University of Chicago, Chicago, IL 
Structural biochemistry of DNA recombination

20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Quinn RA, Phelan VV, Whiteson KL, Garg N, Bailey BA, Lim YW, Conrad DJ, Dorrestein PC, Rohwer FL. Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome. The Isme Journal. PMID 26623545 DOI: 10.1038/Ismej.2015.207  0.92
2015 Quinn RA, Whiteson K, Lim YW, Salamon P, Bailey B, Mienardi S, Sanchez SE, Blake D, Conrad D, Rohwer F. A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation. The Isme Journal. 9: 1024-38. PMID 25514533 DOI: 10.1038/Ismej.2014.234  0.92
2015 Thrift W, Bhattacharjee A, Darvishzadeh-Varcheie M, Lu Y, Hochbaum A, Capolino F, Whiteson K, Ragan R. Surface enhanced Raman scattering for detection of Pseudomonas aeruginosa quorum sensing compounds Proceedings of Spie - the International Society For Optical Engineering. 9550. DOI: 10.1117/12.2188806  0.92
2014 Whiteson KL, Lazarevic V, Tangomo-Bento M, Girard M, Maughan H, Pittet D, Francois P, Schrenzel J. Noma affected children from niger have distinct oral microbial communities based on high-throughput sequencing of 16S rRNA gene fragments. Plos Neglected Tropical Diseases. 8: e3240. PMID 25474262 DOI: 10.1371/Journal.Pntd.0003240  0.92
2014 Whiteson KL, Bailey B, Bergkessel M, Conrad D, Delhaes L, Felts B, Harris JK, Hunter R, Lim YW, Maughan H, Quinn R, Salamon P, Sullivan J, Wagner BD, Rainey PB. The upper respiratory tract as a microbial source for pulmonary infections in cystic fibrosis. Parallels from island biogeography. American Journal of Respiratory and Critical Care Medicine. 189: 1309-15. PMID 24702670 DOI: 10.1164/Rccm.201312-2129Pp  0.92
2014 Quinn RA, Lim YW, Maughan H, Conrad D, Rohwer F, Whiteson KL. Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung. Mbio. 5: e00956-13. PMID 24643867 DOI: 10.1128/Mbio.00956-13  0.92
2014 Whiteson KL, Hernandez D, Lazarevic V, Gaia N, Farinelli L, François P, Pilo P, Frey J, Schrenzel J. A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis. Bmc Genomics. 15: 169. PMID 24581117 DOI: 10.1186/1471-2164-15-169  0.92
2014 Whiteson KL, Meinardi S, Lim YW, Schmieder R, Maughan H, Quinn R, Blake DR, Conrad D, Rohwer F. Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation. The Isme Journal. 8: 1247-58. PMID 24401860 DOI: 10.1038/Ismej.2013.229  0.92
2013 Lim YW, Schmieder R, Haynes M, Furlan M, Matthews TD, Whiteson K, Poole SJ, Hayes CS, Low DA, Maughan H, Edwards R, Conrad D, Rohwer F. Mechanistic model of Rothia mucilaginosa adaptation toward persistence in the CF lung, based on a genome reconstructed from metagenomic data. Plos One. 8: e64285. PMID 23737977 DOI: 10.1371/Journal.Pone.0064285  0.92
2013 Barr JJ, Auro R, Furlan M, Whiteson KL, Erb ML, Pogliano J, Stotland A, Wolkowicz R, Cutting AS, Doran KS, Salamon P, Youle M, Rohwer F. Bacteriophage adhering to mucus provide a non-host-derived immunity. Proceedings of the National Academy of Sciences of the United States of America. 110: 10771-6. PMID 23690590 DOI: 10.1073/Pnas.1305923110  0.92
2013 Lazarevic V, Manzano S, Gaïa N, Girard M, Whiteson K, Hibbs J, François P, Gervaix A, Schrenzel J. Effects of amoxicillin treatment on the salivary microbiota in children with acute otitis media Clinical Microbiology and Infection. 19: E335-E342. PMID 23565884 DOI: 10.1111/1469-0691.12213  0.92
2012 Reyes A, Semenkovich NP, Whiteson K, Rohwer F, Gordon JI. Going viral: next-generation sequencing applied to phage populations in the human gut. Nature Reviews. Microbiology. 10: 607-17. PMID 22864264 DOI: 10.1038/Nrmicro2853  0.92
2012 Bolivar I, Whiteson K, Stadelmann B, Baratti-Mayer D, Gizard Y, Mombelli A, Pittet D, Schrenzel J. Bacterial diversity in oral samples of children in Niger with acute noma, acute necrotizing gingivitis, and healthy controls Plos Neglected Tropical Diseases. 6. PMID 22413030 DOI: 10.1371/Journal.Pntd.0001556  0.92
2012 Lazarevic V, Whiteson K, Gaïa N, Gizard Y, Hernandez D, Farinelli L, Østerås M, François P, Schrenzel J. Analysis of the salivary microbiome using culture-independent techniques Journal of Clinical Bioinformatics. 2. DOI: 10.1186/2043-9113-2-4  0.92
2011 Stenz L, Francois P, Whiteson K, Wolz C, Linder P, Schrenzel J. The CodY pleiotropic repressor controls virulence in gram-positive pathogens Fems Immunology and Medical Microbiology. 62: 123-139. PMID 21539625 DOI: 10.1111/J.1574-695X.2011.00812.X  0.92
2010 Lazarevic V, Whiteson K, Hernandez D, François P, Schrenzel J. Study of inter- and intra-individual variations in the salivary microbiota Bmc Genomics. 11. PMID 20920195 DOI: 10.1186/1471-2164-11-523  0.92
2009 Lazarevic V, Whiteson K, Huse S, Hernandez D, Farinelli L, Østerås M, Schrenzel J, François P. Metagenomic study of the oral microbiota by Illumina high-throughput sequencing Journal of Microbiological Methods. 79: 266-271. PMID 19796657 DOI: 10.1016/J.Mimet.2009.09.012  0.92
2008 Whiteson KL, Rice PA. Binding and catalytic contributions to site recognition by flp recombinase. The Journal of Biological Chemistry. 283: 11414-23. PMID 18276592 DOI: 10.1074/Jbc.M800106200  0.92
2007 Whiteson KL, Chen Y, Chopra N, Raymond AC, Rice PA. Identification of a potential general acid/base in the reversible phosphoryl transfer reactions catalyzed by tyrosine recombinases: Flp H305. Chemistry & Biology. 14: 121-9. PMID 17317566 DOI: 10.1016/J.Chembiol.2007.01.011  0.92
2006 Grindley ND, Whiteson KL, Rice PA. Mechanisms of site-specific recombination. Annual Review of Biochemistry. 75: 567-605. PMID 16756503 DOI: 10.1146/Annurev.Biochem.73.011303.073908  0.92
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