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Jessica E. Prenni - Publications

Affiliations: 
2009-2013 Biochemistry and Molecular Biology Colorado State University, Fort Collins, CO 
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54/126 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Brasier N, Widmer A, Osthoff M, Mutke M, De Ieso F, Brasier-Lutz P, Wolfe L, Aithal V, Broeckling CD, Prenni J, Eckstein J. Non-invasive Drug Monitoring of β-Lactam Antibiotics Using Sweat Analysis-A Pilot Study. Frontiers in Medicine. 7: 476. PMID 32984371 DOI: 10.3389/Fmed.2020.00476  0.303
2020 Zhai C, Djimsa BA, Brown K, Prenni JE, Woerner DR, Belk KE, Nair MN. Tandem mass tagged dataset used to characterize muscle-specific proteome changes in beef during early postmortem period. Data in Brief. 32: 106064. PMID 32775575 DOI: 10.1016/J.Dib.2020.106064  0.418
2020 Le CH, Benage LG, Specht KS, Li Puma LC, Mulligan CM, Heuberger AL, Prenni JE, Claypool SM, Chatfield KC, Sparagna GC, Chicco AJ. Tafazzin deficiency impairs CoA-dependent oxidative metabolism in cardiac mitochondria. The Journal of Biological Chemistry. PMID 32665401 DOI: 10.1074/Jbc.Ra119.011229  0.311
2020 Zhai C, Djimsa BA, Prenni JE, Woerner DR, Belk KE, Nair MN. Tandem mass tag labeling to characterize muscle-specific proteome changes in beef during early postmortem period. Journal of Proteomics. 222: 103794. PMID 32330628 DOI: 10.1016/J.Jprot.2020.103794  0.378
2019 Davis HE, Badger CD, Brophy P, Geornaras I, Burnett TJ, Scanga J, Belk K, Prenni J. Quantification of ractopamine residues on and in beef digestive tract tissues. Journal of Animal Science. PMID 31410462 DOI: 10.1093/Jas/Skz263  0.301
2019 Yao L, Sheflin AM, Broeckling CD, Prenni JE. Data Processing for GC-MS- and LC-MS-Based Untargeted Metabolomics. Methods in Molecular Biology (Clifton, N.J.). 1978: 287-299. PMID 31119670 DOI: 10.1007/978-1-4939-9236-2_18  0.427
2019 Gredell DA, Schroeder AR, Belk KE, Broeckling CD, Heuberger AL, Kim SY, King DA, Shackelford SD, Sharp JL, Wheeler TL, Woerner DR, Prenni JE. Comparison of Machine Learning Algorithms for Predictive Modeling of Beef Attributes Using Rapid Evaporative Ionization Mass Spectrometry (REIMS) Data. Scientific Reports. 9: 5721. PMID 30952873 DOI: 10.1038/S41598-019-40927-6  0.315
2019 Sheflin AM, Kirkwood JS, Wolfe LM, Jahn CE, Broeckling CD, Schachtman DP, Prenni JE. High-throughput quantitative analysis of phytohormones in sorghum leaf and root tissue by ultra-performance liquid chromatography-mass spectrometry. Analytical and Bioanalytical Chemistry. PMID 30879116 DOI: 10.1007/S00216-019-01658-9  0.396
2018 Salihovic S, Fall T, Ganna A, Broeckling CD, Prenni JE, Hyötyläinen T, Kärrman A, Lind PM, Ingelsson E, Lind L. Identification of metabolic profiles associated with human exposure to perfluoroalkyl substances. Journal of Exposure Science & Environmental Epidemiology. PMID 30185940 DOI: 10.1038/S41370-018-0060-Y  0.411
2018 Broeckling CD, Hoyes E, Richardson K, Brown JM, Prenni JE. DataSet-Dependent Acquisition enables comprehensive tandem mass spectrometry coverage of complex samples. Analytical Chemistry. PMID 29846054 DOI: 10.1021/Acs.Analchem.8B00929  0.435
2018 Nieto R LM, Mehaffy C, Islam MN, Fitzgerald B, Belisle J, Prenni J, Dobos KM. Biochemical characterization of isoniazid resistant : can the analysis of clonal strains reveal novel targetable pathways? Molecular & Cellular Proteomics : McP. PMID 29844232 DOI: 10.1074/Mcp.Ra118.000821  0.401
2018 Chicco AJ, Le CH, Gnaiger E, Dreyer HC, Muyskens JB, D'Alessandro A, Nemkov T, Hocker AD, Prenni JE, Wolfe LM, Sindt NM, Lovering AT, Subudhi AW, Roach RC. Adaptive remodeling of skeletal muscle energy metabolism in high-altitude hypoxia: Lessons from AltitudeOmics. The Journal of Biological Chemistry. PMID 29540485 DOI: 10.1074/Jbc.Ra117.000470  0.34
2018 Robison FM, Turner M, Jahn CE, Schwartz HF, Prenni JE, Brick MA, Heuberger AL. Common bean varieties demonstrate differential physiological and metabolic responses to the pathogenic fungus Sclerotinia sclerotiorum. Plant, Cell & Environment. PMID 29476531 DOI: 10.1111/Pce.13176  0.322
2018 Brophy P, Broeckling CD, Murphy J, Prenni JE. Ion-neutral Clustering of Bile Acids in Electrospray Ionization Across UPLC Flow Regimes. Journal of the American Society For Mass Spectrometry. PMID 29427066 DOI: 10.1007/S13361-017-1878-6  0.352
2018 Broeckling CD, Prenni JE. Stacked Injections of Biphasic Extractions for Improved Metabolomic Coverage and Sample Throughput. Analytical Chemistry. PMID 29231702 DOI: 10.1021/Acs.Analchem.7B03654  0.355
2017 Sindt NM, Robison F, Brick MA, Schwartz HF, Heuberger AL, Prenni JE. MALDI-TOF-MS with PLS Modeling Enables Strain Typing of the Bacterial Plant Pathogen Xanthomonas axonopodis. Journal of the American Society For Mass Spectrometry. PMID 29181812 DOI: 10.1007/S13361-017-1839-0  0.411
2017 Romero JJ, Liebig BE, Broeckling CD, Prenni JE, Hansen TR. Pregnancy-induced changes in metabolome and proteome in ovine uterine flushings. Biology of Reproduction. 97: 273-287. PMID 29044433 DOI: 10.1093/Biolre/Iox078  0.421
2017 Hoxmeier JC, Fleshman AC, Broeckling CD, Prenni JE, Dolan MC, Gage KL, Eisen L. Metabolomics of the tick-Borrelia interaction during the nymphal tick blood meal. Scientific Reports. 7: 44394. PMID 28287618 DOI: 10.1038/Srep44394  0.332
2016 Kirkwood JS, Broeckling CD, Donahue S, Prenni JE. A novel microflow LC-MS method for the quantitation of endocannabinoids in serum. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 1033: 271-277. PMID 27592285 DOI: 10.1016/J.Jchromb.2016.08.035  0.389
2016 Broeckling CD, Ganna A, Layer MC, Brown K, Sutton B, Ingelsson E, Peers G, Prenni JE. The 1-SToP Approach to Annotation of LC-MS Metabolomics Data. Analytical Chemistry. PMID 27560453 DOI: 10.1021/Acs.Analchem.6B02479  0.441
2016 Turner MF, Heuberger AL, Kirkwood JS, Collins CC, Wolfrum EJ, Broeckling CD, Prenni JE, Jahn CE. Non-targeted Metabolomics in Diverse Sorghum Breeding Lines Indicates Primary and Secondary Metabolite Profiles Are Associated with Plant Biomass Accumulation and Photosynthesis. Frontiers in Plant Science. 7: 953. PMID 27462319 DOI: 10.3389/Fpls.2016.00953  0.309
2016 Krisher RL, Lyons S, Greene A, Stevens JM, Herrick J, Kirkwood J, Prenni J, Broeckling C, Schoolcraft WB. A novel, highly sensitive tandem mass spectrometry metabolomics approach predicts outcome of poor quality day 5 blastocysts Fertility and Sterility. 106. DOI: 10.1016/J.Fertnstert.2016.07.1016  0.311
2016 Ganna A, Fall T, Salihovic S, Lee W, Broeckling CD, Kumar J, Hägg S, Stenemo M, Magnusson PKE, Prenni JE, Lind L, Pawitan Y, Ingelsson E. Large-scale non-targeted metabolomic profiling in three human population-based studies Metabolomics. 12: 1-13. DOI: 10.1007/S11306-015-0893-5  0.39
2015 Robison FM, Heuberger AL, Brick MA, Prenni JE. Proteome Characterization of Leaves in Common Bean. Proteomes. 3: 236-248. PMID 28248269 DOI: 10.3390/Proteomes3030236  0.36
2015 Abate-Pella D, Freund DM, Ma Y, Simón-Manso Y, Hollender J, Broeckling CD, Huhman DV, Krokhin OV, Stoll DR, Hegeman AD, Kind T, Fiehn O, Schymanski EL, Prenni JE, Sumner LW, et al. Retention projection enables accurate calculation of liquid chromatographic retention times across labs and methods. Journal of Chromatography. A. 1412: 43-51. PMID 26292625 DOI: 10.1016/J.Chroma.2015.07.108  0.721
2015 Szerlong HJ, Herman JA, Krause CM, DeLuca JG, Skoultchi A, Winger QA, Prenni JE, Hansen JC. Proteomic characterization of the nucleolar linker histone H1 interaction network. Journal of Molecular Biology. 427: 2056-71. PMID 25584861 DOI: 10.1016/J.Jmb.2015.01.001  0.316
2014 Webb KM, Broccardo CJ, Prenni JE, Wintermantel WM. Proteomic Profiling of Sugar Beet (Beta vulgaris) Leaves during Rhizomania Compatible Interactions. Proteomes. 2: 208-223. PMID 28250378 DOI: 10.3390/Proteomes2020208  0.363
2014 Heuberger AL, Robison FM, Lyons SM, Broeckling CD, Prenni JE. Evaluating plant immunity using mass spectrometry-based metabolomics workflows. Frontiers in Plant Science. 5: 291. PMID 25009545 DOI: 10.3389/Fpls.2014.00291  0.359
2014 Broeckling CD, Afsar FA, Neumann S, Ben-Hur A, Prenni JE. RAMClust: A novel feature clustering method enables spectral-matching-based annotation for metabolomics data Analytical Chemistry. 86: 6812-6817. PMID 24927477 DOI: 10.1021/Ac501530D  0.43
2014 Brandt LE, Ehrhart EJ, Scherman H, Olver CS, Bohn AA, Prenni JE. Characterization of the canine urinary proteome. Veterinary Clinical Pathology / American Society For Veterinary Clinical Pathology. 43: 193-205. PMID 24773128 DOI: 10.1111/Vcp.12147  0.326
2014 Heuberger AL, Broeckling CD, Kirkpatrick KR, Prenni JE. Application of nontargeted metabolite profiling to discover novel markers of quality traits in an advanced population of malting barley. Plant Biotechnology Journal. 12: 147-60. PMID 24119106 DOI: 10.1111/Pbi.12122  0.345
2014 Broccardo CJ, Hussey GS, Goehring L, Lunn P, Prenni JE. Proteomic characterization of equine cerebrospinal fluid Journal of Equine Veterinary Science. 34: 451-458. DOI: 10.1016/J.Jevs.2013.07.013  0.319
2013 Barnes BB, Wilson MB, Carr PW, Vitha MF, Broeckling CD, Heuberger AL, Prenni J, Janis GC, Corcoran H, Snow NH, Chopra S, Dhandapani R, Tawfall A, Sumner LW, Boswell PG. "Retention projection" enables reliable use of shared gas chromatographic retention data across laboratories, instruments, and methods. Analytical Chemistry. 85: 11650-7. PMID 24205931 DOI: 10.1021/Ac4033615  0.406
2013 Broccardo CJ, Schauer KL, Kohrt WM, Schwartz RS, Murphy JP, Prenni JE. Multiplexed analysis of steroid hormones in human serum using novel microflow tile technology and LC-MS/MS. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 934: 16-21. PMID 23891914 DOI: 10.1016/J.Jchromb.2013.06.031  0.432
2013 Schauer KL, Broccardo CJ, Webb KM, Covey PA, Prenni JE. Mass spectrometry contamination from Tinuvin 770, a common additive in laboratory plastics. Journal of Biomolecular Techniques : Jbt. 24: 57-61. PMID 23814497 DOI: 10.7171/Jbt.13-2402-004  0.421
2013 Schauer KL, Freund DM, Prenni JE, Curthoys NP. Proteomic profiling and pathway analysis of the response of rat renal proximal convoluted tubules to metabolic acidosis. American Journal of Physiology. Renal Physiology. 305: F628-40. PMID 23804448 DOI: 10.1152/Ajprenal.00210.2013  0.771
2013 Freund DM, Prenni JE, Curthoys NP. Proteomic profiling of the mitochondrial inner membrane of rat renal proximal convoluted tubules. Proteomics. 13: 2495-9. PMID 23780708 DOI: 10.1002/Pmic.201200558  0.761
2013 Broeckling CD, Heuberger AL, Prenni JE. Large scale non-targeted metabolomic profiling of serum by ultra performance liquid chromatography-mass spectrometry (UPLC-MS). Journal of Visualized Experiments : Jove. e50242. PMID 23524330 DOI: 10.3791/50242  0.478
2013 Shen M, Broeckling CD, Chu EY, Ziegler G, Baxter IR, Prenni JE, Hoekenga OA. Leveraging non-targeted metabolite profiling via statistical genomics. Plos One. 8: e57667. PMID 23469044 DOI: 10.1371/Journal.Pone.0057667  0.302
2013 Freund DM, Prenni JE. Improved detection of quantitative differences using a combination of spectral counting and MS/MS total ion current. Journal of Proteome Research. 12: 1996-2004. PMID 23445521 DOI: 10.1021/Pr400100K  0.774
2013 Kalashnikova AA, Winkler DD, McBryant SJ, Henderson RK, Herman JA, DeLuca JG, Luger K, Prenni JE, Hansen JC. Linker histone H1.0 interacts with an extensive network of proteins found in the nucleolus. Nucleic Acids Research. 41: 4026-35. PMID 23435226 DOI: 10.1093/Nar/Gkt104  0.315
2013 Hong MG, Karlsson R, Magnusson PK, Lewis MR, Isaacs W, Zheng LS, Xu J, Grönberg H, Ingelsson E, Pawitan Y, Broeckling C, Prenni JE, Wiklund F, Prince JA. A genome-wide assessment of variability in human serum metabolism. Human Mutation. 34: 515-24. PMID 23281178 DOI: 10.1002/Humu.22267  0.348
2013 Freund DM, Prenni JE, Curthoys NP. Response of the mitochondrial proteome of rat renal proximal convoluted tubules to chronic metabolic acidosis. American Journal of Physiology. Renal Physiology. 304: F145-55. PMID 23136003 DOI: 10.1152/Ajprenal.00526.2012  0.749
2013 Broeckling CD, Heuberger AL, Prince JA, Ingelsson E, Prenni JE. Assigning precursor-product ion relationships in indiscriminant MS/MS data from non-targeted metabolite profiling studies Metabolomics. 9: 33-43. DOI: 10.1007/S11306-012-0426-4  0.455
2012 Prenni JE, Vidal M, Olver CS. Preliminary characterization of the murine membrane reticulocyte proteome. Blood Cells, Molecules & Diseases. 49: 74-82. PMID 22633119 DOI: 10.1016/J.Bcmd.2012.05.002  0.359
2012 Cho YS, Dobos KM, Prenni J, Yang H, Hess A, Rosenkrands I, Andersen P, Ryoo SW, Bai GH, Brennan MJ, Izzo A, Bielefeldt-Ohmann H, Belisle JT. Deciphering the proteome of the in vivo diagnostic reagent "purified protein derivative" from Mycobacterium tuberculosis. Proteomics. 12: 979-91. PMID 22522804 DOI: 10.1002/Pmic.201100544  0.33
2011 Goldstrohm DA, Broeckling CD, Prenni JE, Curthoys NP. Importance of manual validation for the identification of phosphopeptides using a linear ion trap mass spectrometer. Journal of Biomolecular Techniques : Jbt. 22: 10-20. PMID 21455477  0.626
2011 Ryan EP, Heuberger AL, Weir TL, Barnett B, Broeckling CD, Prenni JE. Rice bran fermented with saccharomyces boulardii generates novel metabolite profiles with bioactivity. Journal of Agricultural and Food Chemistry. 59: 1862-70. PMID 21306106 DOI: 10.1021/Jf1038103  0.383
2010 Walmsley SJ, Broeckling C, Hess A, Prenni J, Curthoys NP. Proteomic analysis of brush-border membrane vesicles isolated from purified proximal convoluted tubules. American Journal of Physiology. Renal Physiology. 298: F1323-31. PMID 20219825 DOI: 10.1152/Ajprenal.00711.2009  0.652
2010 Mehaffy C, Hess A, Prenni JE, Mathema B, Kreiswirth B, Dobos KM. Descriptive proteomic analysis shows protein variability between closely related clinical isolates of Mycobacterium tuberculosis. Proteomics. 10: 1966-84. PMID 20217870 DOI: 10.1002/Pmic.200900836  0.405
2007 Prenni JE, Avery AC, Olver CS. Proteomics: a review and an example using the reticulocyte membrane proteome. Veterinary Clinical Pathology / American Society For Veterinary Clinical Pathology. 36: 13-24. PMID 17311189 DOI: 10.1111/J.1939-165X.2007.Tb00176.X  0.389
2006 Dooley GP, Prenni JE, Prentiss PL, Cranmer BK, Andersen ME, Tessari JD. Identification of a novel hemoglobin adduct in Sprague Dawley rats exposed to atrazine. Chemical Research in Toxicology. 19: 692-700. PMID 16696572 DOI: 10.1021/Tx060023C  0.354
2003 Go EP, Prenni JE, Wei J, Jones A, Hall SC, Witkowska HE, Shen Z, Siuzdak G. Desorption/ionization on silicon time-of-flight/time-of-flight mass spectrometry. Analytical Chemistry. 75: 2504-6. PMID 12918997 DOI: 10.1021/Ac026253N  0.432
2003 Prenni JE, Shen Z, Trauger S, Chen W, Siuzdak G. Protein characterization using Liquid Chromatography Desorption Ionization on Silicon Mass Spectrometry (LC-DIOS-MS) Spectroscopy. 17: 693-698. DOI: 10.1155/2003/172838  0.448
Low-probability matches (unlikely to be authored by this person)
2016 Schlenker T, Greene A, Lyons S, Stevens JM, Herrick J, Prenni J, Kirkwood J, Broeckling C, Schoolcraft WB, Krisher RL. Blastocyst metabolism, as determined by a novel quantitative approach, is not impacted by chromosome complement or gender but is altered with maternal age Fertility and Sterility. 106. DOI: 10.1016/J.Fertnstert.2016.07.1001  0.294
2015 Hoxmeier JC, Thompson BD, Broeckling CD, Small P, Foy BD, Prenni J, Dobos KM. Analysis of the metabolome of Anopheles gambiae mosquito after exposure to Mycobacterium ulcerans. Scientific Reports. 5: 9242. PMID 25784490 DOI: 10.1038/Srep09242  0.292
2012 Machain-Williams C, Mammen MP, Zeidner NS, Beaty BJ, Prenni JE, Nisalak A, Blair CD. Association of human immune response to Aedes aegypti salivary proteins with dengue disease severity. Parasite Immunology. 34: 15-22. PMID 21995849 DOI: 10.1111/J.1365-3024.2011.01339.X  0.289
2021 Mason TJ, Bettenhausen HM, Chaparro JM, Uchanski ME, Prenni JE. Evaluation of ambient mass spectrometry tools for assessing inherent postharvest pepper quality. Horticulture Research. 8: 160. PMID 34193823 DOI: 10.1038/s41438-021-00596-x  0.288
2015 Webb KM, Wintermantel WM, Kaur N, Prenni JE, Broccardo CJ, Wolfe LM, Hladky LL. Differential abundance of proteins in response to Beet necrotic yellow vein virus during compatible and incompatible interactions in sugar beet containing Rz1 or Rz2 Physiological and Molecular Plant Pathology. 91: 96-105. DOI: 10.1016/J.Pmpp.2015.06.006  0.287
2010 Olver CS, Webb TL, Long LJ, Scherman H, Prenni JE. Comparison of methods for depletion of albumin and IgG from equine serum. Veterinary Clinical Pathology / American Society For Veterinary Clinical Pathology. 39: 337-45. PMID 20727125 DOI: 10.1111/J.1939-165X.2010.00241.X  0.287
2014 Ganna A, Salihovic S, Sundström J, Broeckling CD, Hedman ÅK, Magnusson PKE, Pedersen NL, Larsson A, Siegbahn A, Zilmer M, Prenni J, Ärnlöv J, Lind L, Fall T, Ingelsson E. Large-scale Metabolomic Profiling Identifies Novel Biomarkers for Incident Coronary Heart Disease Plos Genetics. 10. PMID 25502724 DOI: 10.1371/Journal.Pgen.1004801  0.286
2018 Chaparro JM, Holm DG, Broeckling CD, Prenni JE, Heuberger AL. Metabolomics and Ionomics of Potato Tuber Reveals an Influence of Cultivar and Market Class on Human Nutrients and Bioactive Compounds. Frontiers in Nutrition. 5: 36. PMID 29876353 DOI: 10.3389/Fnut.2018.00036  0.285
2012 Heuberger AL, Broeckling CD, Lewis MR, Salazar L, Bouckaert P, Prenni JE. Metabolomic profiling of beer reveals effect of temperature on non-volatile small molecules during short-term storage. Food Chemistry. 135: 1284-9. PMID 22953855 DOI: 10.1016/J.Foodchem.2012.05.048  0.285
2010 Mueller NH, Walters MS, Marcus RA, Graf LL, Prenni J, Gilden D, Silverstein SJ, Cohrs RJ. Identification of phosphorylated residues on varicella-zoster virus immediate-early protein ORF63. The Journal of General Virology. 91: 1133-7. PMID 20089801 DOI: 10.1099/Vir.0.019067-0  0.28
2016 Fall T, Salihovic S, Brandmaier S, Nowak C, Ganna A, Gustafsson S, Broeckling CD, Prenni JE, Kastenmüller G, Peters A, Magnusson PK, Wang-Sattler R, Giedraitis V, Berne C, Gieger C, et al. Non-targeted metabolomics combined with genetic analyses identifies bile acid synthesis and phospholipid metabolism as being associated with incident type 2 diabetes. Diabetologia. PMID 27406814 DOI: 10.1007/S00125-016-4041-1  0.28
2018 Mitacek RM, Ke Y, Prenni JE, Jadeja R, VanOverbeke DL, Mafi GG, Ramanathan R. Mitochondrial Degeneration, Depletion of NADH, and Oxidative Stress Decrease Color Stability of Wet-Aged Beef Longissimus Steaks. Journal of Food Science. PMID 30496612 DOI: 10.1111/1750-3841.14396  0.275
2016 Heuberger AL, Broeckling CD, Sedin D, Holbrook C, Barr L, Kirkpatrick K, Prenni JE. Evaluation of non-volatile metabolites in beer stored at high temperature and utility as an accelerated method to predict flavour stability. Food Chemistry. 200: 301-7. PMID 26830592 DOI: 10.1016/J.Foodchem.2016.01.022  0.274
2014 Sessions-Bresnahan DR, Schauer KL, Heuberger AL, Prenni JE, Carnevale EM. Alterations in the equine oocyte and follicle associated with obesity and metabolic syndrome Journal of Equine Veterinary Science. 34: 112. DOI: 10.1016/J.Jevs.2013.10.077  0.273
2008 Bhamidi S, Scherman MS, Rithner CD, Prenni JE, Chatterjee D, Khoo KH, McNeil MR. The identification and location of succinyl residues and the characterization of the interior arabinan region allow for a model of the complete primary structure of Mycobacterium tuberculosis mycolyl arabinogalactan. The Journal of Biological Chemistry. 283: 12992-3000. PMID 18303028 DOI: 10.1074/Jbc.M800222200  0.271
2018 Mulawa EA, Kirkwood JS, Wolfe LM, Wojda SJ, Prenni JE, Florant GL, Donahue SW. Seasonal Changes in Endocannabinoid Concentrations between Active and Hibernating Marmots (Marmota flaviventris). Journal of Biological Rhythms. 748730418777660. PMID 29862861 DOI: 10.1177/0748730418777660  0.267
2008 Dooley GP, Reardon KF, Prenni JE, Tjalkens RB, Legare ME, Foradori CD, Tessari JE, Hanneman WH. Proteomic analysis of diaminochlorotriazine adducts in wistar rat pituitary glands and LbetaT2 rat pituitary cells. Chemical Research in Toxicology. 21: 844-51. PMID 18370413 DOI: 10.1021/tx700386f  0.267
2018 Nowak C, Hetty S, Salihovic S, Castillejo-Lopez C, Ganna A, Cook NL, Broeckling CD, Prenni JE, Shen X, Giedraitis V, Ärnlöv J, Lind L, Berne C, Sundström J, Fall T, et al. Glucose challenge metabolomics implicates medium-chain acylcarnitines in insulin resistance. Scientific Reports. 8: 8691. PMID 29875472 DOI: 10.1038/S41598-018-26701-0  0.263
2012 Fujimoto S, Seebart C, Guastafierro T, Prenni J, Caiafa P, Zlatanova J. Proteome analysis of protein partners to nucleosomes containing canonical H2A or the variant histones H2A.Z or H2A.X. Biological Chemistry. 393: 47-61. PMID 22628298 DOI: 10.1515/Bc-2011-216  0.261
2023 Seitz VA, Chaparro JM, Schipanski ME, Wrighton KC, Prenni JE. Cover Crop Cultivar, Species, and Functional Diversity is Reflected in Variable Root Exudation Composition. Journal of Agricultural and Food Chemistry. 71: 11373-11385. PMID 37477948 DOI: 10.1021/acs.jafc.3c02912  0.258
2014 Henley T, Reddivari L, Broeckling CD, Bunning M, Miller J, Avens JS, Stone M, Prenni JE, Vanamala J. American India Pale Ale matrix rich in xanthohumol is potent in suppressing proliferation and elevating apoptosis of human colon cancer cells International Journal of Food Science and Technology. 49: 2464-2471. DOI: 10.1111/Ijfs.12570  0.255
2012 Bisson GP, Mehaffy C, Broeckling C, Prenni J, Rifat D, Lun DS, Burgos M, Weissman D, Karakousis PC, Dobos K. Upregulation of the phthiocerol dimycocerosate biosynthetic pathway by rifampin-resistant, rpoB mutant Mycobacterium tuberculosis. Journal of Bacteriology. 194: 6441-52. PMID 23002228 DOI: 10.1128/Jb.01013-12  0.25
2013 Prenni J, Heuberger A, Sedin D. Nontargeted metabolite profiling by UHPLC-MS: A case study in beer reveals effect of temperature on nonvolatile small molecules during storage Lcgc North America. 31: 306-315.  0.25
2010 Kruh NA, Troudt J, Izzo A, Prenni J, Dobos KM. Portrait of a pathogen: the Mycobacterium tuberculosis proteome in vivo. Plos One. 5: e13938. PMID 21085642 DOI: 10.1371/Journal.Pone.0013938  0.249
2017 Kim S, Rossmassler K, Broeckling CD, Galloway S, Prenni J, De Long SK. Impact of inoculum sources on biotransformation of pharmaceuticals and personal care products. Water Research. 125: 227-236. PMID 28865372 DOI: 10.1016/J.Watres.2017.08.041  0.248
2022 Yao L, Davidson EA, Shaikh MW, Forsyth CB, Prenni JE, Broeckling CD. Quantitative analysis of short-chain fatty acids in human plasma and serum by GC-MS. Analytical and Bioanalytical Chemistry. PMID 35091760 DOI: 10.1007/s00216-021-03785-8  0.248
2013 Reisdorph N, Stearman R, Kechris K, Phang TL, Reisdorph R, Prenni J, Erle DJ, Coldren C, Schey K, Nesvizhskii A, Geraci M. Hands-on workshops as an effective means of learning advanced technologies including genomics, proteomics and bioinformatics. Genomics, Proteomics & Bioinformatics. 11: 368-77. PMID 24316330 DOI: 10.1016/J.Gpb.2013.10.002  0.244
2015 Salihovic S, Ganna A, Fall T, Broeckling CD, Prenni JE, van Bavel B, Lind PM, Ingelsson E, Lind L. The metabolic fingerprint of p,p'-DDE and HCB exposure in humans. Environment International. 88: 60-66. PMID 26720637 DOI: 10.1016/J.Envint.2015.12.015  0.241
2023 Zhai C, Lonergan SM, Huff-Lonergan EJ, Johnson LG, Brown K, Prenni JE, N Nair M. Lipid Peroxidation Products Influence Calpain-1 Functionality In Vitro by Covalent Binding. Journal of Agricultural and Food Chemistry. PMID 37167568 DOI: 10.1021/acs.jafc.3c01225  0.239
2016 Chicco AJ, Le CH, Gnaiger E, Dreyer HC, Hocker AD, Prenni JE, D'alessandro A, Nemkov TG, Lovering AT, Subudhi AW, Roach RC. Remodeling of muscle mitochondrial bioenergetics in hypoxia Biochimica Et Biophysica Acta (Bba) - Bioenergetics. 1857: e29-e30. DOI: 10.1016/J.Bbabio.2016.04.059  0.237
2016 Adewole OO, Erhabor GE, Adewole TO, Ojo AO, Harriet O, Wolfe LM, Prenni JE. Proteomic profiling of Eccrine sweat reveals its potential as a diagnostic biofluid for active tuberculosis. Proteomics. Clinical Applications. PMID 26948146 DOI: 10.1002/Prca.201500071  0.237
2019 Rossmassler K, Kim S, Broeckling CD, Galloway S, Prenni J, De Long SK. Impact of primary carbon sources on microbiome shaping and biotransformation of pharmaceuticals and personal care products. Biodegradation. PMID 30820709 DOI: 10.1007/S10532-019-09871-0  0.235
2019 Stenemo M, Ganna A, Salihovic S, Nowak C, Sundström J, Giedraitis V, Broeckling CD, Prenni JE, Svensson P, Magnusson PKE, Lind L, Ingelsson E, Ärnlöv J, Fall T. The metabolites urobilin and sphingomyelin (30:1) are associated with incident heart failure in the general population. Esc Heart Failure. PMID 31148414 DOI: 10.1002/Ehf2.12453  0.23
2020 Michell KA, Isweiri H, Newman SE, Bunning M, Bellows LL, Dinges MM, Grabos LE, Rao S, Foster MT, Heuberger AL, Prenni JE, Thompson HJ, Uchanski ME, Weir TL, Johnson SA. Microgreens: Consumer sensory perception and acceptance of an emerging functional food crop. Journal of Food Science. PMID 32144771 DOI: 10.1111/1750-3841.15075  0.229
2010 Szerlong HJ, Prenni JE, Nyborg JK, Hansen JC. Activator-dependent p300 acetylation of chromatin in vitro: Enhancement of transcription by disruption of repressive nucleosome-nucleosome interactions Journal of Biological Chemistry. 285: 31954-31964. PMID 20720004 DOI: 10.1074/Jbc.M110.148718  0.229
2016 Chicco AJ, Le CH, Benage L, Mulligan CM, Heuberger AL, Prenni JE. Substrate-specific impairment of respiratory function in Taz -deficient cardiac mitochondria: Potential role of CoA deficiency Biochimica Et Biophysica Acta (Bba) - Bioenergetics. 1857: e75. DOI: 10.1016/J.Bbabio.2016.04.175  0.227
2019 Cravens EM, Kirkwood JS, Wolfe LM, Packer RA, Whalen LR, Wojda SJ, Prenni JE, Florant GL, Donahue SW. The effects of neurectomy and hibernation on bone properties and the endocannabinoid system in marmots (Marmota flaviventris). Comparative Biochemistry and Physiology. Part a, Molecular & Integrative Physiology. 110621. PMID 31783174 DOI: 10.1016/J.Cbpa.2019.110621  0.224
2019 Lind L, Salihovic S, Ganna A, Sundström J, Broeckling CD, Magnusson PK, Pedersen NL, Siegbahn A, Prenni J, Fall T, Ingelsson E, Ärnlöv J. A Multi-Cohort Metabolomics Analysis Discloses Sphingomyelin (32:1) Levels to be Inversely Related to Incident Ischemic Stroke. Journal of Stroke and Cerebrovascular Diseases : the Official Journal of National Stroke Association. 104476. PMID 31806450 DOI: 10.1016/J.Jstrokecerebrovasdis.2019.104476  0.223
2012 Hussey GS, Lunn DP, Hussey SB, Broccardo C, Broeckling C, Prenni J, Ashton LV, Goehring LS. Use of CSF biomarkers as a model to study EHM Journal of Equine Veterinary Science. 32. DOI: 10.1016/J.Jevs.2012.08.139  0.221
2016 Nowak C, Salihovic S, Ganna A, Brandmaier S, Tukiainen T, Broeckling CD, Magnusson PK, Prenni JE, Wang-Sattler R, Peters A, Strauch K, Meitinger T, Giedraitis V, Ärnlöv J, Berne C, et al. Effect of Insulin Resistance on Monounsaturated Fatty Acid Levels: A Multi-cohort Non-targeted Metabolomics and Mendelian Randomization Study. Plos Genetics. 12: e1006379. PMID 27768686 DOI: 10.1371/Journal.Pgen.1006379  0.22
2016 Doherty AH, Roteliuk DM, Gookin SE, McGrew AK, Broccardo CJ, Condon KW, Prenni JE, Wojda SJ, Florant GL, Donahue SW. Exploring the Bone Proteome to Help Explain Altered Bone Remodeling and Preservation of Bone Architecture and Strength in Hibernating Marmots. Physiological and Biochemical Zoology : Pbz. 89: 364-376. PMID 27617358 DOI: 10.1086/687413  0.22
2017 Shishkova E, Kwiecien NW, Hebert AS, Westphall MS, Prenni JE, Coon JJ. Gender Diversity in a STEM Subfield - Analysis of a Large Scientific Society and Its Annual Conferences. Journal of the American Society For Mass Spectrometry. PMID 28952050 DOI: 10.1007/S13361-017-1803-Z  0.219
2022 Zhai C, Schilling B, Prenni JE, Brooks JC, Legako JF, Miller RK, Hernandez-Sintharakao MJ, Gifford CL, Delmore R, Nair MN. Evaluating the ability of rapid evaporative ionization mass spectrometry to differentiate beef palatability based on consumer preference. Journal of Food Science and Technology. 59: 4134-4140. PMID 36193374 DOI: 10.1007/s13197-022-05562-6  0.216
2013 Prenni AJ, Tobo Y, Garcia E, DeMott PJ, Huffman JA, McCluskey CS, Kreidenweis SM, Prenni JE, Pöhlker C, Pöschl U. The impact of rain on ice nuclei populations at a forested site in Colorado Geophysical Research Letters. 40: 227-231. DOI: 10.1029/2012Gl053953  0.21
2013 Ryan EP, Heuberger AL, Broeckling CD, Borresen EC, Tillotson C, Prenni JE. Advances in Nutritional Metabolomics. Current Metabolomics. 1: 109-120. PMID 29682447 DOI: 10.2174/2213235x11301020001  0.206
2020 Salihovic S, Broeckling CD, Ganna A, Prenni JE, Sundström J, Berne C, Lind L, Ingelsson E, Fall T, Ärnlöv J, Nowak C. Non-targeted urine metabolomics and associations with prevalent and incident type 2 diabetes. Scientific Reports. 10: 16474. PMID 33020500 DOI: 10.1038/s41598-020-72456-y  0.203
2021 Lind L, Salihovic S, Sundström J, Broeckling CD, Magnusson PK, Prenni J, Fall T, Ärnlöv J. Multicohort Metabolomics Analysis Discloses 9-Decenoylcarnitine to Be Associated With Incident Atrial Fibrillation. Journal of the American Heart Association. 10: e017579. PMID 33399003 DOI: 10.1161/JAHA.120.017579  0.181
2019 Sheflin AM, Chiniquy D, Yuan C, Goren E, Kumar I, Braud M, Brutnell T, Eveland AL, Tringe S, Liu P, Kresovich S, Marsh EL, Schachtman DP, Prenni JE. Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis. Plant Direct. 3: e00122. PMID 31245765 DOI: 10.1002/pld3.122  0.177
2007 Bruemmer J, Lewis M, Prenni J, Squires E, Hansen T. GENE EXPRESSION IN THE EQUINE ENDOMETRIUM DURING MATERNAL RECOGNITION OF PREGNANCY Biology of Reproduction. 77: 98-98. DOI: 10.1093/Biolreprod/77.S1.98B  0.176
2020 Ross A, Brunius C, Chevallier O, Dervilly G, Elliott C, Guitton Y, Prenni JE, Savolainen O, Hemeryck L, Vidkjær NH, Scollan N, Stead SL, Zhang R, Vanhaecke L. Making complex measurements of meat composition fast: Application of rapid evaporative ionisation mass spectrometry to measuring meat quality and fraud. Meat Science. 108333. PMID 33067082 DOI: 10.1016/j.meatsci.2020.108333  0.174
2023 Anthony BM, Chaparro JM, Prenni JE, Minas IS. Carbon sufficiency boosts phenylpropanoid biosynthesis early in peach fruit development priming superior fruit quality. Plant Physiology and Biochemistry : Ppb. 196: 1019-1031. PMID 36898214 DOI: 10.1016/j.plaphy.2023.02.038  0.171
2021 Bowen JK, Chaparro JM, McCorkle AM, Palumbo E, Prenni JE. The impact of extraction protocol on the chemical profile of cannabis extracts from a single cultivar. Scientific Reports. 11: 21801. PMID 34750475 DOI: 10.1038/s41598-021-01378-0  0.14
2020 Anthony BM, Chaparro JM, Prenni JE, Minas IS. Early metabolic priming under differing carbon sufficiency conditions influences peach fruit quality development. Plant Physiology and Biochemistry : Ppb. 157: 416-431. PMID 33202321 DOI: 10.1016/j.plaphy.2020.11.004  0.126
2010 Seebart C, Prenni J, Tomschik M, Zlatanova J. New nuclear partners for nucleosome assembly protein 1: unexpected associations. Biochemistry and Cell Biology = Biochimie Et Biologie Cellulaire. 88: 927-36. PMID 21102655 DOI: 10.1139/O10-115  0.125
2023 Ventura M, Holland ME, Smith MB, Chaparro JM, Prenni J, Patz JA, Paskewitz S, Weir TL, Stull VJ. Suitability of maize crop residue fermented by as feed for edible crickets: growth performance, micronutrient content, and iron bioavailability. Frontiers in Nutrition. 10: 1157811. PMID 37497060 DOI: 10.3389/fnut.2023.1157811  0.123
2024 Seitz VA, McGivem BB, Borton MA, Chaparro JM, Schipanski ME, Prenni JE, Wrighton KC. Cover Crop Root Exudates Impact Soil Microbiome Functional Trajectories in Agricultural Soils. Research Square. PMID 38410449 DOI: 10.21203/rs.3.rs-3956430/v1  0.12
2021 Goren E, Wang C, He Z, Sheflin AM, Chiniquy D, Prenni JE, Tringe S, Schachtman DP, Liu P. Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization. Bmc Bioinformatics. 22: 362. PMID 34229628 DOI: 10.1186/s12859-021-04232-2  0.107
2022 Seitz VA, McGivern BB, Daly RA, Chaparro JM, Borton MA, Sheflin AM, Kresovich S, Shields L, Schipanski ME, Wrighton KC, Prenni JE. Variation in Root Exudate Composition Influences Soil Microbiome Membership and Function. Applied and Environmental Microbiology. e0022622. PMID 35536051 DOI: 10.1128/aem.00226-22  0.106
2021 Chiniquy D, Barnes EM, Zhou J, Hartman K, Li X, Sheflin A, Pella A, Marsh E, Prenni J, Deutschbauer AM, Schachtman DP, Tringe SG. Microbial Community Field Surveys Reveal Abundant Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes. Frontiers in Microbiology. 12: 598180. PMID 33767674 DOI: 10.3389/fmicb.2021.598180  0.105
2016 Heuberger A, Broeckling CD, Prenni J. Nontargeted metabolite profiling in next-generation plant breeding: A case study in Malting Barley Lc-Gc Europe. 29.  0.104
2023 Chai YN, Qi Y, Goren E, Chiniquy D, Sheflin AM, Tringe SG, Prenni JE, Liu P, Schachtman DP. Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum. Msystems. e0119023. PMID 38132569 DOI: 10.1128/msystems.01190-23  0.099
2023 Larson VJ, Rico JL, Wolfe LM, Sharvelle S, Prenni J, De Long SK. Composting Post-Anaerobic Digestion for Emerging Contaminant Biodegradation: Impacts of Operating Conditions. Journal of Environmental Quality. PMID 37729590 DOI: 10.1002/jeq2.20515  0.095
2020 Davis HE, Geornaras I, Lindstrom V, Chaparro JM, Nair MN, Delmore RJ, Engle TE, Belk KE, Prenni JE. Effects of differing withdrawal times from ractopamine hydrochloride on residue concentrations of beef muscle, adipose tissue, rendered tallow, and large intestine. Plos One. 15: e0242673. PMID 33264353 DOI: 10.1371/journal.pone.0242673  0.093
2023 Hayes CB, Carter O, MacWilliams JR, Cranshaw W, Chaparro JM, Prenni JE, Nachappa P. Biology and management of hemp russet mite (Acari: Eriophyidae). Journal of Economic Entomology. PMID 37450624 DOI: 10.1093/jee/toad137  0.092
2021 Brasier N, Widmer A, Osthoff M, Mutke M, De Ieso F, Brasier-Lutz P, Brown K, Yao L, Broeckling CD, Prenni J, Eckstein J. The Detection of Vancomycin in Sweat: A Next-Generation Digital Surrogate Marker for Antibiotic Tissue Penetration: A Pilot Study. Digital Biomarkers. 5: 24-28. PMID 33615119 DOI: 10.1159/000512947  0.086
2021 Watson HG, Decloedt AI, Hemeryck LY, Van Landschoot A, Prenni J. Peptidomics of an industrial gluten-free barley malt beer and its non-gluten-free counterpart: Characterisation and immunogenicity. Food Chemistry. 355: 129597. PMID 33878557 DOI: 10.1016/j.foodchem.2021.129597  0.084
2017 Nowak C, Salihovic S, Ganna A, Brandmaier S, Tukiainen T, Broeckling CD, Magnusson PK, Prenni JE, Wang-Sattler R, Peters A, Strauch K, Meitinger T, Giedraitis V, Ärnlöv J, Berne C, et al. Correction: Effect of Insulin Resistance on Monounsaturated Fatty Acid Levels: A Multi-cohort Non-targeted Metabolomics and Mendelian Randomization Study. Plos Genetics. 13: e1007002. PMID 28910285 DOI: 10.1371/journal.pgen.1007002  0.075
2022 Berry JC, Qi M, Sonawane BV, Sheflin A, Cousins A, Prenni J, Schachtman DP, Liu P, Bart RS. Increased signal-to-noise ratios within experimental field trials by regressing spatially distributed soil properties as principal components. Elife. 11. PMID 35819140 DOI: 10.7554/eLife.70056  0.075
2021 Johnson SA, Prenni JE, Heuberger AL, Isweiri H, Chaparro JM, Newman SE, Uchanski ME, Omerigic HM, Michell KA, Bunning M, Foster MT, Thompson HJ, Weir TL. Comprehensive Evaluation of Metabolites and Minerals in 6 Microgreen Species and the Influence of Maturity. Current Developments in Nutrition. 5: nzaa180. PMID 33644632 DOI: 10.1093/cdn/nzaa180  0.067
2022 Ahmed S, de la Parra J, Elouafi I, German B, Jarvis A, Lal V, Lartey A, Longvah T, Malpica C, Vázquez-Manjarrez N, Prenni J, Aguilar-Salinas CA, Srichamnong W, Rajasekharan M, Shafizadeh T, et al. Foodomics: A Data-Driven Approach to Revolutionize Nutrition and Sustainable Diets. Frontiers in Nutrition. 9: 874312. PMID 35592635 DOI: 10.3389/fnut.2022.874312  0.064
2020 Schinkel ER, Nelson ER, Young BE, Bernstein RM, Taylor SN, Brown LD, Hay WW, Brown KJ, Prenni J. Concentrating human milk: an innovative point-of-care device designed to increase human milk feeding options for preterm infants. Journal of Perinatology : Official Journal of the California Perinatal Association. PMID 33060780 DOI: 10.1038/s41372-020-00820-x  0.048
2013 Prenni AJ, Tobo Y, Garcia E, DeMott PJ, Huffman JA, Hill TCJ, McCluskey CS, Prenni JE, Franc GD, Pöhlker C, Pöschl U, Kreidenweis SM. Biological ice nuclei and the impact of rain on ice nuclei populations Aip Conference Proceedings. 1527: 895-898. DOI: 10.1063/1.4803415  0.016
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