| Year |
Citation |
Score |
| 2023 |
Maltz-Matyschsyk M, Melchiorre CK, Herbst KW, Hogan AH, Dibble K, O'Sullivan B, Graf J, Jadhav A, Lawrence DA, Lee WT, Carson KJ, Radolf JD, Salazar JC, Lynes MA. Development of a biomarker signature using grating-coupled fluorescence plasmonic microarray for diagnosis of MIS-C. Frontiers in Bioengineering and Biotechnology. 11: 1066391. PMID 37064248 DOI: 10.3389/fbioe.2023.1066391 |
0.663 |
|
| 2021 |
Thees AV, Pietrosimone KM, Melchiorre CK, Marden JN, Graf J, Lynes MA, Maltz-Matyschsyk M. PmtA Regulates Pyocyanin Expression and Biofilm Formation in . Frontiers in Microbiology. 12: 789765. PMID 34867928 DOI: 10.3389/fmicb.2021.789765 |
0.687 |
|
| 2020 |
Talagrand-Reboul E, Colston S, Graf J, Lamy B, Jumas-Bilak E. Comparative and evolutionary genomics of isolates provide insight into the pathoadaptation of Aeromonas. Genome Biology and Evolution. PMID 32196086 DOI: 10.1093/Gbe/Evaa055 |
0.414 |
|
| 2019 |
Rangel LT, Marden J, Colston S, Setubal JC, Graf J, Gogarten JP. Identification and characterization of putative Aeromonas spp. T3SS effectors. Plos One. 14: e0214035. PMID 31163020 DOI: 10.1371/Journal.Pone.0214035 |
0.416 |
|
| 2019 |
Jozwick AKS, LaPatra SE, Graf J, Welch TJ. Flagellar regulation mediated by the Rcs pathway is required for virulence in the fish pathogen Yersinia ruckeri. Fish & Shellfish Immunology. 91: 306-314. PMID 31121291 DOI: 10.1016/J.Fsi.2019.05.036 |
0.379 |
|
| 2019 |
Goldstein S, Beka L, Graf J, Klassen JL. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing. Bmc Genomics. 20: 23. PMID 30626323 DOI: 10.1186/S12864-018-5381-7 |
0.342 |
|
| 2018 |
Talagrand-Reboul E, Latif-Eugenín F, Beaz-Hidalgo R, Colston S, Figueras MJ, Graf J, Jumas-Bilak E, Lamy B. Genome-driven evaluation and redesign of PCR tools for improving the detection of virulence-associated genes in aeromonads. Plos One. 13: e0201428. PMID 30110345 DOI: 10.1371/Journal.Pone.0201428 |
0.409 |
|
| 2018 |
Benjamino J, Beka L, Graf J. Microbiome Analyses for Toxicological Studies. Current Protocols in Toxicology. e53. PMID 30044549 DOI: 10.1002/Cptx.53 |
0.384 |
|
| 2018 |
Beka L, Fullmer MS, Colston SM, Nelson MC, Talagrand-Reboul E, Walker P, Ford B, Whitaker IS, Lamy B, Gogarten JP, Graf J. Low-Level Antimicrobials in the Medicinal Leech Select for Resistant Pathogens That Spread to Patients. Mbio. 9. PMID 30042201 DOI: 10.1128/Mbio.01328-18 |
0.348 |
|
| 2018 |
Gogarten JF, Davies TJ, Benjamino J, Gogarten JP, Graf J, Mielke A, Mundry R, Nelson MC, Wittig RM, Leendertz FH, Calvignac-Spencer S. Factors influencing bacterial microbiome composition in a wild non-human primate community in Taï National Park, Côte d'Ivoire. The Isme Journal. PMID 29955140 DOI: 10.1038/S41396-018-0166-1 |
0.338 |
|
| 2018 |
Benjamino J, Lincoln S, Srivastava R, Graf J. Low-abundant bacteria drive compositional changes in the gut microbiota after dietary alteration. Microbiome. 6: 86. PMID 29747692 DOI: 10.1186/S40168-018-0469-5 |
0.361 |
|
| 2018 |
Colston SM, Navarro A, Martinez-Murcia AJ, Graf J. Draft Genome Sequence of Aeromonas cavernicola sp. nov. DSM 24474, Isolated from a Cavern Brook in the Moravia Region of the Czech Republic. Genome Announcements. 6. PMID 29650571 DOI: 10.1128/Genomea.00227-18 |
0.368 |
|
| 2018 |
Colston SM, Navarro A, Martinez-Murcia AJ, Graf J. Draft Genome Sequence of Aeromonas lusitana sp. nov. Strain DSM 24905, Isolated from a Hot Spring in Vila-Real, Portugal. Genome Announcements. 6. PMID 29650570 DOI: 10.1128/Genomea.00226-18 |
0.381 |
|
| 2017 |
Talagrand-Reboul E, Roger F, Kimper JL, Colston SM, Graf J, Latif-Eugenín F, Figueras MJ, Petit F, Marchandin H, Jumas-Bilak E, Lamy B. Delineation of Taxonomic Species within Complex of Species: Aeromonas media and Related Species as a Test Case. Frontiers in Microbiology. 8: 621. PMID 28458658 DOI: 10.3389/Fmicb.2017.00621 |
0.38 |
|
| 2017 |
Evenhuis JP, LaPatra SE, Graf J. Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain CSF-298-10. Genome Announcements. 5. PMID 28408684 DOI: 10.1128/Genomea.00173-17 |
0.392 |
|
| 2016 |
Jozwick AK, Graf J, Welch TJ. The flagellar master operon flhDC is a pleiotropic regulator involved in motility and virulence of the fish pathogen Yersinia ruckeri. Journal of Applied Microbiology. PMID 27981729 DOI: 10.1111/Jam.13374 |
0.335 |
|
| 2016 |
Marden JN, McClure EA, Beka L, Graf J. Host Matters: Medicinal Leech Digestive-Tract Symbionts and Their Pathogenic Potential. Frontiers in Microbiology. 7: 1569. PMID 27790190 DOI: 10.3389/Fmicb.2016.01569 |
0.39 |
|
| 2016 |
Nelson MC, Varney JS, Welch TJ, Graf J. Draft Genome Sequence of Lactococcus garvieae Strain PAQ102015-99, an Outbreak Strain Isolated from a Commercial Trout Farm in the Northwestern United States. Genome Announcements. 4. PMID 27492003 DOI: 10.1128/Genomea.00781-16 |
0.369 |
|
| 2016 |
Graf J. Lessons from Digestive-Tract Symbiosis Between Bacteria and Invertebrates. Annual Review of Microbiology. PMID 27482740 DOI: 10.1146/Annurev-Micro-091014-104258 |
0.372 |
|
| 2016 |
Benjamino J, Graf J. Characterization of the Core and Caste-Specific Microbiota in the Termite, Reticulitermes flavipes. Frontiers in Microbiology. 7: 171. PMID 26925043 DOI: 10.3389/Fmicb.2016.00171 |
0.419 |
|
| 2016 |
Federhen S, Rossello-Mora R, Klenk HP, Tindall BJ, Konstantinidis KT, Whitman WB, Brown D, Labeda D, Ussery D, Garrity GM, Colwell RR, Hasan N, Graf J, Parte A, Yarza P, et al. Meeting report: GenBank microbial genomic taxonomy workshop (12-13 May, 2015) Standards in Genomic Sciences. DOI: 10.1186/S40793-016-0134-1 |
0.339 |
|
| 2015 |
Ott BM, Beka L, Graf J, Rio RV. Draft Genome Sequence of Pedobacter sp. Strain Hv1, an Isolate from Medicinal Leech Mucosal Castings. Genome Announcements. 3. PMID 26679583 DOI: 10.1128/Genomea.01469-15 |
0.375 |
|
| 2015 |
Mosser T, Talagrand-Reboul E, Colston SM, Graf J, Figueras MJ, Jumas-Bilak E, Lamy B. Exposure to pairs of Aeromonas strains enhances virulence in the Caenorhabditis elegans infection model. Frontiers in Microbiology. 6: 1218. PMID 26583012 DOI: 10.3389/Fmicb.2015.01218 |
0.365 |
|
| 2015 |
Maltz M, LeVarge BL, Graf J. Identification of iron and heme utilization genes in Aeromonas and their role in the colonization of the leech digestive tract. Frontiers in Microbiology. 6: 763. PMID 26284048 DOI: 10.3389/Fmicb.2015.00763 |
0.301 |
|
| 2015 |
Li YF, Abraham C, Nelson MC, Chen PH, Graf J, Yu Z. Effect of organic loading on the microbiota in a temperature-phased anaerobic digestion (TPAD) system co-digesting dairy manure and waste whey. Applied Microbiology and Biotechnology. PMID 26084892 DOI: 10.1007/S00253-015-6738-3 |
0.326 |
|
| 2015 |
Nelson MC, Bomar L, Graf J. Complete Genome Sequence of the Novel Leech Symbiont Mucinivorans hirudinis M3T. Genome Announcements. 3. PMID 25657285 DOI: 10.1128/Genomea.01530-14 |
0.751 |
|
| 2015 |
Nelson MC, LaPatra SE, Welch TJ, Graf J. Complete Genome Sequence of Yersinia ruckeri Strain CSF007-82, Etiologic Agent of Red Mouth Disease in Salmonid Fish. Genome Announcements. 3. PMID 25635018 DOI: 10.1128/Genomea.01491-14 |
0.362 |
|
| 2015 |
Nelson MC, Bomar L, Maltz M, Graf J. Mucinivorans hirudinis gen. nov., sp. nov., an anaerobic, mucin-degrading bacterium isolated from the digestive tract of the medicinal leech Hirudo verbana. International Journal of Systematic and Evolutionary Microbiology. 65: 990-5. PMID 25563920 DOI: 10.1099/Ijs.0.000052 |
0.74 |
|
| 2014 |
Colston SM, Fullmer MS, Beka L, Lamy B, Gogarten JP, Graf J. Bioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test case. Mbio. 5: e02136. PMID 25406383 DOI: 10.1128/Mbio.02136-14 |
0.404 |
|
| 2014 |
Maltz MA, Bomar L, Lapierre P, Morrison HG, McClure EA, Sogin ML, Graf J. Metagenomic analysis of the medicinal leech gut microbiota. Frontiers in Microbiology. 5: 151. PMID 24860552 DOI: 10.3389/Fmicb.2014.00151 |
0.771 |
|
| 2014 |
Yu R, Smets BF, Gan P, MacKay AA, Graf J. Seasonal and spatial variations in microbial activity at various phylogenetic resolutions at a groundwater - surface water interface. Canadian Journal of Microbiology. 60: 277-86. PMID 24749954 DOI: 10.1139/Cjm-2014-0048 |
0.324 |
|
| 2014 |
Nelson MC, Morrison HG, Benjamino J, Grim SL, Graf J. Analysis, optimization and verification of Illumina-generated 16S rRNA gene amplicon surveys. Plos One. 9: e94249. PMID 24722003 DOI: 10.1371/Journal.Pone.0094249 |
0.366 |
|
| 2014 |
Whitaker IS, Maltz M, Siddall ME, Graf J. Characterization of the digestive tract microbiota of Hirudo orientalis (medicinal leech) and antibiotic resistance profile. Plastic and Reconstructive Surgery. 133: 408e-418e. PMID 24572887 DOI: 10.1097/01.Prs.0000438461.06217.Bb |
0.426 |
|
| 2013 |
Bomar L, Stephens WZ, Nelson MC, Velle K, Guillemin K, Graf J. Draft Genome Sequence of Aeromonas veronii Hm21, a Symbiotic Isolate from the Medicinal Leech Digestive Tract. Genome Announcements. 1. PMID 24092791 DOI: 10.1128/Genomea.00800-13 |
0.773 |
|
| 2012 |
Bomar L, Graf J. Investigation into the physiologies of Aeromonas veronii in vitro and inside the digestive tract of the medicinal leech using RNA-seq. The Biological Bulletin. 223: 155-66. PMID 22983040 DOI: 10.1086/Bblv223N1P155 |
0.752 |
|
| 2012 |
Nelson MC, Graf J. Bacterial symbioses of the medicinal leech Hirudo verbana. Gut Microbes. 3: 322-31. PMID 22572874 DOI: 10.4161/Gmic.20227 |
0.36 |
|
| 2011 |
Bomar L, Maltz M, Colston S, Graf J. Directed culturing of microorganisms using metatranscriptomics. Mbio. 2: e00012-11. PMID 21467263 DOI: 10.1128/Mbio.00012-11 |
0.76 |
|
| 2011 |
Silver AC, Williams D, Faucher J, Horneman AJ, Gogarten JP, Graf J. Complex evolutionary history of the Aeromonas veronii group revealed by host interaction and DNA sequence data. Plos One. 6: e16751. PMID 21359176 DOI: 10.1371/Journal.Pone.0016751 |
0.384 |
|
| 2011 |
Maltz M, Graf J. The type II secretion system is essential for erythrocyte lysis and gut colonization by the leech digestive tract symbiont Aeromonas veronii. Applied and Environmental Microbiology. 77: 597-603. PMID 21097598 DOI: 10.1128/Aem.01621-10 |
0.343 |
|
| 2009 |
Chopra AK, Graf J, Horneman AJ, Johnson JA. Virulence factor-activity relationships (VFAR) with specific emphasis on Aeromonas species (spp.). Journal of Water and Health. 7: S29-54. PMID 19717930 DOI: 10.2166/Wh.2009.053 |
0.38 |
|
| 2009 |
Kikuchi Y, Bomar L, Graf J. Stratified bacterial community in the bladder of the medicinal leech, Hirudo verbana. Environmental Microbiology. 11: 2758-70. PMID 19678832 DOI: 10.1111/J.1462-2920.2009.02004.X |
0.752 |
|
| 2009 |
Rio RV, Maltz M, McCormick B, Reiss A, Graf J. Symbiont succession during embryonic development of the European medicinal leech, Hirudo verbana. Applied and Environmental Microbiology. 75: 6890-5. PMID 19648363 DOI: 10.1128/Aem.01129-09 |
0.371 |
|
| 2009 |
Silver AC, Graf J. Prevalence of genes encoding the type three secretion system and the effectors AexT and AexU in the Aeromonas veronii group. Dna and Cell Biology. 28: 383-8. PMID 19534604 DOI: 10.1089/Dna.2009.0867 |
0.414 |
|
| 2008 |
Laufer AS, Siddall ME, Graf J. Characterization of the digestive-tract microbiota of Hirudo orientalis, a european medicinal leech. Applied and Environmental Microbiology. 74: 6151-4. PMID 18689513 DOI: 10.1128/Aem.00795-08 |
0.359 |
|
| 2008 |
Yu R, Graf J, Smets BF. An improved cell recovery method for iron oxidizing bacterial (IOB) enrichments. Journal of Microbiological Methods. 72: 235-40. PMID 18207592 DOI: 10.1016/J.Mimet.2007.12.001 |
0.307 |
|
| 2007 |
Sha J, Wang SF, Suarez G, Sierra JC, Fadl AA, Erova TE, Foltz SM, Khajanchi BK, Silver A, Graf J, Schein CH, Chopra AK. Further characterization of a type III secretion system (T3SS) and of a new effector protein from a clinical isolate of Aeromonas hydrophila--part I. Microbial Pathogenesis. 43: 127-46. PMID 17644303 DOI: 10.1016/J.Micpath.2007.05.002 |
0.378 |
|
| 2007 |
Silver AC, Rabinowitz NM, Küffer S, Graf J. Identification of Aeromonas veronii genes required for colonization of the medicinal leech, Hirudo verbana. Journal of Bacteriology. 189: 6763-72. PMID 17616592 DOI: 10.1128/Jb.00685-07 |
0.394 |
|
| 2007 |
Rio RV, Anderegg M, Graf J. Characterization of a catalase gene from Aeromonas veronii, the digestive-tract symbiont of the medicinal leech. Microbiology (Reading, England). 153: 1897-906. PMID 17526846 DOI: 10.1099/Mic.0.2006/003020-0 |
0.395 |
|
| 2007 |
Silver AC, Kikuchi Y, Fadl AA, Sha J, Chopra AK, Graf J. Interaction between innate immune cells and a bacterial type III secretion system in mutualistic and pathogenic associations. Proceedings of the National Academy of Sciences of the United States of America. 104: 9481-6. PMID 17517651 DOI: 10.1073/Pnas.0700286104 |
0.39 |
|
| 2007 |
Kikuchi Y, Graf J. Spatial and temporal population dynamics of a naturally occurring two-species microbial community inside the digestive tract of the medicinal leech. Applied and Environmental Microbiology. 73: 1984-91. PMID 17277211 DOI: 10.1128/Aem.01833-06 |
0.358 |
|
| 2007 |
Siddall ME, Worthen PL, Johnson M, Graf J. Novel role for Aeromonas jandaei as a digestive tract symbiont of the North American medicinal leech. Applied and Environmental Microbiology. 73: 655-8. PMID 17114316 DOI: 10.1128/Aem.01282-06 |
0.354 |
|
| 2006 |
Seshadri R, Joseph SW, Chopra AK, Sha J, Shaw J, Graf J, Haft D, Wu M, Ren Q, Rosovitz MJ, Madupu R, Tallon L, Kim M, Jin S, Vuong H, et al. Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades. Journal of Bacteriology. 188: 8272-82. PMID 16980456 DOI: 10.1128/Jb.00621-06 |
0.436 |
|
| 2006 |
Graf J, Kikuchi Y, Rio RV. Leeches and their microbiota: naturally simple symbiosis models. Trends in Microbiology. 14: 365-71. PMID 16843660 DOI: 10.1016/J.Tim.2006.06.009 |
0.357 |
|
| 2006 |
Worthen PL, Gode CJ, Graf J. Culture-independent characterization of the digestive-tract microbiota of the medicinal leech reveals a tripartite symbiosis. Applied and Environmental Microbiology. 72: 4775-81. PMID 16820471 DOI: 10.1128/Aem.00356-06 |
0.405 |
|
| 2005 |
Morandi A, Zhaxybayeva O, Gogarten JP, Graf J. Evolutionary and diagnostic implications of intragenomic heterogeneity in the 16S rRNA gene in Aeromonas strains. Journal of Bacteriology. 187: 6561-4. PMID 16159790 DOI: 10.1128/Jb.187.18.6561-6564.2005 |
0.385 |
|
| 2003 |
Braschler TR, Merino S, Tomás JM, Graf J. Complement resistance is essential for colonization of the digestive tract of Hirudo medicinalis by Aeromonas strains. Applied and Environmental Microbiology. 69: 4268-71. PMID 12839811 DOI: 10.1128/Aem.69.7.4268-4271.2003 |
0.31 |
|
| 2001 |
Indergand S, Graf J. Ingested blood contributes to the specificity of the symbiosis of Aeromonas veronii biovar sobria and Hirudo medicinalis, the medicinal leech. Applied and Environmental Microbiology. 66: 4735-41. PMID 11055917 DOI: 10.1128/Aem.66.11.4735-4741.2000 |
0.351 |
|
| 2000 |
Graf J, Ruby EG. Novel effects of a transposon insertion in the Vibrio fischeri glnD gene: Defects in iron uptake and symbiotic persistence in addition to nitrogen utilization Molecular Microbiology. 37: 168-179. PMID 10931314 DOI: 10.1046/J.1365-2958.2000.01984.X |
0.303 |
|
| 1999 |
Graf J. Diverse restriction fragment length polymorphism patterns of the PCR-amplified 16S rRNA genes in Aeromonas veronii strains and possible misidentification of Aeromonas species. Journal of Clinical Microbiology. 37: 3194-3197. PMID 10488176 DOI: 10.1128/Jcm.37.10.3194-3197.1999 |
0.362 |
|
| 1999 |
Graf J. Symbiosis of Aeromonas veronii Biovar sobria and Hirudo medicinalis, the Medicinal Leech: a Novel Model for Digestive Tract Associations Infection and Immunity. 67: 1-7. PMID 9864188 DOI: 10.1128/Iai.67.1.1-7.1999 |
0.401 |
|
| 1998 |
Graf J, Ruby EG. Host-derived amino acids support the proliferation of symbiotic bacteria Proceedings of the National Academy of Sciences of the United States of America. 95: 1818-1822. PMID 9465100 DOI: 10.1073/Pnas.95.4.1818 |
0.353 |
|
| 1994 |
Graf J, Dunlap PV, Ruby EG. Effect of transposon-induced motility mutations on colonization of the host light organ by Vibrio fischeri Journal of Bacteriology. 176: 6986-6991. PMID 7961462 DOI: 10.1128/Jb.176.22.6986-6991.1994 |
0.344 |
|
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