Kiran Chada - Related publications

University of Medicine and Dentistry of New Jersey, Piscataway Township, New Jersey, United States 
Genetics, Biochemistry
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Bellido Molias F, Sim A, Leong KW, An O, Song Y, Ng VHE, Lim MWJ, Ying C, Teo JXJ, Göke J, Chen L. Antisense RNAs influence promoter usage of their counterpart sense genes in cancer. Cancer Research. PMID 34649947 DOI: 10.1158/0008-5472.CAN-21-1859   
2021 Mwapagha LM, Chibanga V, Shipanga H, Parker MI. New insights from Whole Genome Sequencing: BCLAF1 deletion as a structural variant that predisposes cells towards cellular transformation. Oncology Reports. 46. PMID 34490482 DOI: 10.3892/or.2021.8180   
2021 Shi Q, Tang B, Li Y, Li Y, Lin T, He D, Wei G. Identification of CDC20 as a Novel Biomarker in Diagnosis and Treatment of Wilms Tumor. Frontiers in Pediatrics. 9: 663054. PMID 34513754 DOI: 10.3389/fped.2021.663054   
2021 Zou Q, Qi H. Deletion of ribosomal paralogs Rpl39 and Rpl39l compromises cell proliferation via protein synthesis and mitochondrial activity. The International Journal of Biochemistry & Cell Biology. 139: 106070. PMID 34428590 DOI: 10.1016/j.biocel.2021.106070   
2021 Shi K, Zhu X, Wu J, Chen Y, Zhang J, Sun X. Centromere protein E as a novel biomarker and potential therapeutic target for retinoblastoma. Bioengineered. 12: 5950-5970. PMID 34482803 DOI: 10.1080/21655979.2021.1972080   
2021 Yoon JH, Cho YS, Lee HB, Park JY, Lim HK. () Gene Cloning and Gonad-Specific Expression Pattern in Starry Flounder (). Animals : An Open Access Journal From Mdpi. 11. PMID 34438719 DOI: 10.3390/ani11082256   
2021 Liu L, Zhao Q, Cheng C, Yi J, Sun H, Wang Q, Quan W, Xue Y, Sun L, Cong X, Zhang Y. Analysis of Bulk RNA Sequencing Data Reveals Novel Transcription Factors Associated With Immune Infiltration Among Multiple Cancers. Frontiers in Immunology. 12: 644350. PMID 34489925 DOI: 10.3389/fimmu.2021.644350   
2021 Han Z, Feng W, Hu R, Ge Q, Ma W, Zhang W, Xu S, Zhan B, Zhang L, Sun X, Zhou X. RNA-seq profiling reveals PBMC RNA as a potential biomarker for hepatocellular carcinoma. Scientific Reports. 11: 17797. PMID 34493740 DOI: 10.1038/s41598-021-96952-x   
2021 Prieto TG, Machado-Rugolo J, Baldavira CM, Velosa APP, Teodoro WR, Saber AMA, Capelozzi VL. The Fibrosis-Targeted Collagen/Integrins Gene Profile Predicts Risk of Metastasis in Pulmonary Neuroendocrine Neoplasms. Frontiers in Oncology. 11: 706141. PMID 34458147 DOI: 10.3389/fonc.2021.706141   
2021 Stosic A, Fuligni F, Anderson ND, Davidson S, de Borja R, Acker M, Forte V, Campisi P, Propst EJ, Wolter NE, Chami R, Mete O, Malkin D, Shlien A, Wasserman JD. Diverse oncogenic fusions and distinct gene expression patterns define the genomic landscape of pediatric papillary thyroid carcinoma. Cancer Research. PMID 34535459 DOI: 10.1158/0008-5472.CAN-21-0761   
2021 Meurer L, Ferdman L, Belcher B, Camarata T. The SIX Family of Transcription Factors: Common Themes Integrating Developmental and Cancer Biology. Frontiers in Cell and Developmental Biology. 9: 707854. PMID 34490256 DOI: 10.3389/fcell.2021.707854   
2021 Liang W, Zou X, Li G, Zhou S, Tian C, Schaefke B. Systematic Analysis of Monoallelic Gene Expression and Chromatin Accessibility Across Multiple Tissues in Hybrid Mice. Frontiers in Cell and Developmental Biology. 9: 717555. PMID 34631706 DOI: 10.3389/fcell.2021.717555   
2021 Kim SH, Kim B, Kim JH, Kim DH, Lee SH, Lee DS, Lee HJ. L- Gene Expression in Canine Fetal Fibroblasts Promotes Self-Renewal Capacity but Not Tumor Formation. Cells. 10. PMID 34440750 DOI: 10.3390/cells10081980   
2021 Graßhoff H, Müller-Fielitz H, Dogbevia GK, Körbelin J, Bannach J, Vahldieck CM, Kusche-Vihrog K, Jöhren O, Müller OJ, Nogueiras R, Prevot V, Schwaninger M. Short regulatory DNA sequences to target brain endothelial cells for gene therapy. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X211039617. PMID 34427142 DOI: 10.1177/0271678X211039617   
2021 Xiao L, Zhang S, Zheng Q, Zhang S. Dysregulation of KIF14 regulates the cell cycle and predicts poor prognosis in cervical cancer: a study based on integrated approaches. Brazilian Journal of Medical and Biological Research = Revista Brasileira De Pesquisas Medicas E Biologicas. 54: e11363. PMID 34495250 DOI: 10.1590/1414-431X2021e11363   
2021 Goszczynski DE, Tinetti PS, Choi YH, Hinrichs K, Ross PJ. Genome activation in equine in vitro-produced embryos. Biology of Reproduction. PMID 34515744 DOI: 10.1093/biolre/ioab173   
2021 Galfrè SG, Morandin F, Pietrosanto M, Cremisi F, Helmer-Citterich M. COTAN: scRNA-seq data analysis based on gene co-expression. Nar Genomics and Bioinformatics. 3: lqab072. PMID 34396096 DOI: 10.1093/nargab/lqab072   
2021 Yang GH, Fontaine DA, Lodh S, Blumer JT, Roopra A, Davis DB. TCF19 Impacts a Network of Inflammatory and DNA Damage Response Genes in the Pancreatic β-Cell. Metabolites. 11. PMID 34436454 DOI: 10.3390/metabo11080513   
2021 Ha JH, Jayaraman M, Yan M, Dhanasekaran P, Isidoro C, Song YS, Dhanasekaran DN. -Regulated Transcriptome and Its Therapeutic Significance in Ovarian Cancer. Biomolecules. 11. PMID 34439877 DOI: 10.3390/biom11081211   
2021 Sun Z, Mao Y, Zhang X, Lu S, Wang H, Zhang C, Xiao C, Cao Y, Qing Y, Wang Y, Li K. Identification of ARHGEF38, NETO2, GOLM1, and SAPCD2 Associated With Prostate Cancer Progression by Bioinformatic Analysis and Experimental Validation. Frontiers in Cell and Developmental Biology. 9: 718638. PMID 34540835 DOI: 10.3389/fcell.2021.718638   
2021 Yang J, Li Q, Du W, Yao Y, Shen G, Jiang W, Pang Y. Genome-Wide Analysis of Glycoside Hydrolase Family 35 Genes and Their Potential Roles in Cell Wall Development in . Plants (Basel, Switzerland). 10. PMID 34451684 DOI: 10.3390/plants10081639   
2021 Rud D, Marjoram P, Siegmund K, Shibata D. Functional human genes typically exhibit epigenetic conservation. Plos One. 16: e0253250. PMID 34520456 DOI: 10.1371/journal.pone.0253250   
2021 Zheng T, Huang J, Xiang X, Li S, Yu J, Qu K, Xu Z, Han P, Dong Z, Liu Y, Xu F, Yang H, Jäättelä M, Luo Y, Liu B. Systematical analysis reveals a strong cancer relevance of CREB1-regulated genes. Cancer Cell International. 21: 530. PMID 34641874 DOI: 10.1186/s12935-021-02224-z   
2021 Xie CD, Wang B, Shen ZJ, Yao WY, Ao H, Li B, Pei Y, Zhou R. Validation of the Reference Genes for the Gene Expression Studies in Different Cell Lines of Pig. Biomed Research International. 2021: 5364190. PMID 34458368 DOI: 10.1155/2021/5364190   
2021 Dai Z, Li R, Hou Y, Li Q, Zhao K, Li T, Li MJ, Wu X. Inducible CRISPRa screen identifies putative enhancers. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34531148 DOI: 10.1016/j.jgg.2021.06.012   
2021 Zuo Z, Sun X, Cao L, Zhang S, Yu J, Xu X, Xu Z, Liu G, Qu C. Genome-wide identification of genes in and their expression under different nitrogen treatments. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 27: 1919-1931. PMID 34616114 DOI: 10.1007/s12298-021-01055-6   
2021 Thomas AL, Marsman J, Antony J, Schierding W, O'Sullivan JM, Horsfield JA. Transcriptional Regulation of : An Informatics Analysis. Genes. 12. PMID 34440349 DOI: 10.3390/genes12081175   
2021 Rehnitz J, Capp E, Messmer B, Nguyen XP, Germeyer A, Freis A, Dietrich JE, Hinderhofer K, Strowitzki T, Vogt PH. and AKT/mTOR Signaling in Human Granulosa Cells: Functional Interaction and Impact on Ovarian Response. Journal of Clinical Medicine. 10. PMID 34501340 DOI: 10.3390/jcm10173892   
2021 Zhang X, Wang W, Wang Y, Jiang G. Identification of genes and pathways leading to metastasis and poor prognosis in melanoma. Aging. 13. PMID 34582363 DOI: 10.18632/aging.203554   
2021 Ubina T, Vahedi-Hunter T, Agnew-Svoboda W, Wong W, Gupta A, Santhakumar V, Riccomagno MM. ExBoX: a simple Boolean exclusion strategy to drive expression in neurons. Journal of Cell Science. PMID 34515305 DOI: 10.1242/jcs.257212   
2021 Kumar S, Ruggles A, Logan S, Mazarakis A, Tyson T, Bates M, Grosse C, Reed D, Li Z, Grimwood J, Schmutz J, Saski C. Comparative Transcriptomics of Non-Embryogenic and Embryogenic Callus in Semi-Recalcitrant and Non-Recalcitrant Upland Cotton Lines. Plants (Basel, Switzerland). 10. PMID 34579308 DOI: 10.3390/plants10091775   
2021 Liu S, Zhang Y, Zhang S, Qiu L, Zhang B, Han J. Identification of Hub Genes Related to Liver Metastasis of Colorectal Cancer by Integrative Analysis. Frontiers in Oncology. 11: 714866. PMID 34490113 DOI: 10.3389/fonc.2021.714866   
2021 Haam S, Han JH, Lee HW, Koh YW. Tumor Nonimmune-Microenvironment-Related Gene Expression Signature Predicts Brain Metastasis in Lung Adenocarcinoma Patients after Surgery: A Machine Learning Approach Using Gene Expression Profiling. Cancers. 13. PMID 34503278 DOI: 10.3390/cancers13174468   
2021 Marion-Poll L, Forêt B, Zielinski D, Massip F, Attia M, Carter AC, Syx L, Chang HY, Gendrel AV, Heard E. Locus specific epigenetic modalities of random allelic expression imbalance. Nature Communications. 12: 5330. PMID 34504093 DOI: 10.1038/s41467-021-25630-3   
2021 Efremenko A, Balbuena P, Clewell RA, Black M, Pluta L, Andersen ME, Gentry PR, Yager JW, Clewell HJ. Time-dependent genomic response in primary human uroepithelial cells exposed to arsenite for up to 60 days. Toxicology. 461: 152893. PMID 34425169 DOI: 10.1016/j.tox.2021.152893   
2021 Yu X, Han Y, Liu S, Jiang W, Song Y, Tong J, Qiao T, Lv Z, Li D. Analysis of Genetic Alterations Related to DNA Methylation in Testicular Germ Cell Tumors Based on Data Mining. Cytogenetic and Genome Research. 1-12. PMID 34433169 DOI: 10.1159/000516385   
2021 Luo D, Zhang X, Li XK, Chen G. Identification of Key Functional Modules and Immunomodulatory Regulators of Hepatocellular Carcinoma. Journal of Immunology Research. 2021: 1801873. PMID 34423049 DOI: 10.1155/2021/1801873   
2021 Shen H, Guo YL, Li GH, Zhao W, Zhang L. Gene Expression Analysis Reveals Key Genes and Signalings Associated with the Prognosis of Prostate Cancer. Computational and Mathematical Methods in Medicine. 2021: 9946015. PMID 34497666 DOI: 10.1155/2021/9946015   
2021 Holland CH, Ramirez Flores RO, Myllys M, Hassan R, Edlund K, Hofmann U, Marchan R, Cadenas C, Reinders J, Hoehme S, Seddek AL, Dooley S, Keitel V, Godoy P, Begher-Tibbe B, et al. Transcriptomic Cross-Species Analysis of Chronic Liver Disease Reveals Consistent Regulation Between Humans and Mice. Hepatology Communications. PMID 34558834 DOI: 10.1002/hep4.1797   
2021 Liang Y, Wang M, Liu Y, Wang C, Takahashi K, Naruse K. Meta-Analysis-Assisted Detection of Gravity-Sensitive Genes in Human Vascular Endothelial Cells. Frontiers in Cell and Developmental Biology. 9: 689662. PMID 34422812 DOI: 10.3389/fcell.2021.689662   
2021 Zhu Z, Song M, Li W, Li M, Chen S, Chen B. Identification, Verification and Pathway Enrichment Analysis of Prognosis-Related Immune Genes in Patients With Hepatocellular Carcinoma. Frontiers in Oncology. 11: 695001. PMID 34616672 DOI: 10.3389/fonc.2021.695001   
2021 Sheng T, Ho SWT, Ooi WF, Xu C, Xing M, Padmanabhan N, Huang KK, Ma L, Ray M, Guo YA, Sim NL, Anene-Nzelu CG, Chang MM, Razavi-Mohseni M, Beer MA, et al. Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer. Genome Medicine. 13: 158. PMID 34635154 DOI: 10.1186/s13073-021-00970-3   
2021 Huang G, Kawabe Y, Shirakawa K, Akiyama T, Kamihira M. Novel transgenic Chlamydomonas reinhardtii strain with retargetable genomic transgene integration using Cre-loxP system. Journal of Bioscience and Bioengineering. PMID 34420898 DOI: 10.1016/j.jbiosc.2021.07.006   
2021 Goszczynski DE, Tinetti PS, Choi YH, Ross PJ, Hinrichs K. Allele-specific expression analysis reveals conserved and unique features of preimplantation development in equine ICSI embryos. Biology of Reproduction. PMID 34515759 DOI: 10.1093/biolre/ioab174   
2021 Gandhi S, Li Y, Tang W, Christensen JB, Urrutia HA, Vieceli FM, Piacentino ML, Bronner ME. A single-plasmid approach for genome editing coupled with long-term lineage analysis in chick embryos. Development (Cambridge, England). 148. PMID 34437692 DOI: 10.1242/dev.193565   
2021 Wang B, Gong S, Shao W, Han L, Li Z, Zhang Z, Zheng Y, Ouyang F, Ma Y, Xu W, Feng Y. Comprehensive analysis of pivotal biomarkers, immune cell infiltration and therapeutic drugs for steroid-induced osteonecrosis of the femoral head. Bioengineered. 12: 5971-5984. PMID 34488536 DOI: 10.1080/21655979.2021.1972081   
2021 Lambert JT, Su-Feher L, Cichewicz K, Warren TL, Zdilar I, Wang Y, Lim KJ, Haigh JL, Morse SJ, Canales CP, Stradleigh TW, Castillo Palacios E, Haghani V, Moss SD, Parolini H, et al. Parallel functional testing identifies enhancers active in early postnatal mouse brain. Elife. 10. PMID 34605404 DOI: 10.7554/eLife.69479   
2021 Wu J, Huang Y, Yu C, Li X, Wang L, Hong J, Lin D, Han X, Guo G, Hu T, Huang H. The Key Gene Expression Patterns and Prognostic Factors in Malignant Transformation from Enchondroma to Chondrosarcoma. Frontiers in Oncology. 11: 693034. PMID 34568022 DOI: 10.3389/fonc.2021.693034   
2021 Song Ba Y, Wang Ma F, Wei Ma Y, Chen Ba D, Deng Ba G. ATP5A1 Participates in Transcriptional and Posttranscriptional Regulation of Cancer-Associated Genes by Modulating Their Expression and Alternative Splicing Profiles in HeLa Cells. Technology in Cancer Research & Treatment. 20: 15330338211039126. PMID 34520292 DOI: 10.1177/15330338211039126   
2021 Tooley JG, Catlin JP, Schaner Tooley CE. CREB-mediated transcriptional activation of NRMT1 drives muscle differentiation. Transcription. 1-17. PMID 34403304 DOI: 10.1080/21541264.2021.1963627