| Year |
Citation |
Score |
| 2020 |
Stein LY, Arp DJ. Loss of ammonia monooxygenase activity in nitrosomonas europaea upon exposure to nitrite Applied and Environmental Microbiology. 64: 4098-102. PMID 9758853 DOI: 10.1128/Aem.64.10.4098-4102.1998 |
0.418 |
|
| 2017 |
Qin W, Amin SA, Lundeen RA, Heal KR, Martens-Habbena W, Turkarslan S, Urakawa H, Costa KC, Hendrickson EL, Wang T, Beck DA, Tiquia-Arashiro SM, Taub F, Holmes AD, Vajrala N, ... ... Arp DJ, et al. Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations. The Isme Journal. PMID 29053148 DOI: 10.1038/Ismej.2017.186 |
0.327 |
|
| 2015 |
Sayavedra-Soto L, Ferrell R, Dobie M, Mellbye B, Chaplen F, Buchanan A, Chang J, Bottomley P, Arp D. Nitrobacter winogradskyi transcriptomic response to low and high ammonium concentrations. Fems Microbiology Letters. 362: 1-7. PMID 25673652 DOI: 10.1093/Femsle/Fnu040 |
0.402 |
|
| 2015 |
Pérez J, Buchanan A, Mellbye B, Ferrell R, Chang JH, Chaplen F, Bottomley PJ, Arp DJ, Sayavedra-Soto LA. Interactions of Nitrosomonas europaea and Nitrobacter winogradskyi grown in co-culture. Archives of Microbiology. 197: 79-89. PMID 25362506 DOI: 10.1007/S00203-014-1056-1 |
0.301 |
|
| 2014 |
Vajrala N, Bottomley PJ, Stahl DA, Arp DJ, Sayavedra-Soto LA. Cycloheximide prevents the de novo polypeptide synthesis required to recover from acetylene inhibition in Nitrosopumilus maritimus. Fems Microbiology Ecology. 88: 495-502. PMID 24606542 DOI: 10.1111/1574-6941.12316 |
0.407 |
|
| 2013 |
Bollmann A, Sedlacek CJ, Norton J, Laanbroek HJ, Suwa Y, Stein LY, Klotz MG, Arp D, Sayavedra-Soto L, Lu M, Bruce D, Detter C, Tapia R, Han J, Woyke T, et al. Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations. Standards in Genomic Sciences. 7: 469-82. PMID 24019993 DOI: 10.4056/Sigs.3517166 |
0.405 |
|
| 2013 |
Taylor AE, Vajrala N, Giguere AT, Gitelman AI, Arp DJ, Myrold DD, Sayavedra-Soto L, Bottomley PJ. Use of aliphatic n-alkynes to discriminate soil nitrification activities of ammonia-oxidizing thaumarchaea and bacteria Applied and Environmental Microbiology. 79: 6544-6551. PMID 23956393 DOI: 10.1128/Aem.01928-13 |
0.304 |
|
| 2013 |
Lawton TJ, Bowen KE, Sayavedra-Soto LA, Arp DJ, Rosenzweig AC. Characterization of a nitrite reductase involved in nitrifier denitrification. The Journal of Biological Chemistry. 288: 25575-83. PMID 23857587 DOI: 10.1074/Jbc.M113.484543 |
0.384 |
|
| 2013 |
Kimbrel JA, Chang J, Arp DJ, Sayavedra-Soto LA. The Draft Genome Sequence of Nocardioides sp. Strain CF8 Reveals the Scope of Its Metabolic Capabilities. Genome Announcements. 1. PMID 23833136 DOI: 10.1128/Genomea.00439-13 |
0.366 |
|
| 2013 |
Vajrala N, Martens-Habbena W, Sayavedra-Soto LA, Schauer A, Bottomley PJ, Stahl DA, Arp DJ. Hydroxylamine as an intermediate in ammonia oxidation by globally abundant marine archaea. Proceedings of the National Academy of Sciences of the United States of America. 110: 1006-11. PMID 23277575 DOI: 10.1073/Pnas.1214272110 |
0.44 |
|
| 2011 |
Sayavedra-Soto LA, Hamamura N, Liu CW, Kimbrel JA, Chang JH, Arp DJ. The membrane-associated monooxygenase in the butane-oxidizing Gram-positive bacterium Nocardioides sp. strain CF8 is a novel member of the AMO/PMO family. Environmental Microbiology Reports. 3: 390-6. PMID 23761285 DOI: 10.1111/J.1758-2229.2010.00239.X |
0.676 |
|
| 2011 |
Cooley RB, Arp DJ, Karplus PA. Symerythrin structures at atomic resolution and the origins of rubrerythrins and the ferritin-like superfamily. Journal of Molecular Biology. 413: 177-94. PMID 21872605 DOI: 10.1016/J.Jmb.2011.08.019 |
0.305 |
|
| 2011 |
Suwa Y, Yuichi S, Norton JM, Bollmann A, Klotz MG, Stein LY, Laanbroek HJ, Arp DJ, Goodwin LA, Chertkov O, Held B, Bruce D, Detter JC, Detter JC, Tapia R, et al. Genome sequence of Nitrosomonas sp. strain AL212, an ammonia-oxidizing bacterium sensitive to high levels of ammonia. Journal of Bacteriology. 193: 5047-8. PMID 21868805 DOI: 10.1128/Jb.05521-11 |
0.407 |
|
| 2011 |
Vajrala N, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Role of a Fur homolog in iron metabolism in Nitrosomonas europaea. Bmc Microbiology. 11: 37. PMID 21338516 DOI: 10.1186/1471-2180-11-37 |
0.362 |
|
| 2011 |
Sayavedra-Soto LA, Vajrala N, Arp DJ. Dissecting iron uptake and homeostasis in Nitrosomonas europaea. Methods in Enzymology. 486: 403-28. PMID 21185446 DOI: 10.1016/B978-0-12-381294-0.00018-3 |
0.309 |
|
| 2010 |
Gvakharia BO, Tjaden B, Vajrala N, Sayavedra-Soto LA, Arp DJ. Computational prediction and transcriptional analysis of sRNAs in Nitrosomonas europaea. Fems Microbiology Letters. 312: 46-54. PMID 20840601 DOI: 10.1111/J.1574-6968.2010.02095.X |
0.335 |
|
| 2010 |
Taylor AE, Arp DJ, Bottomley PJ, Semprini L. Extending the alkene substrate range of vinyl chloride utilizing Nocardioides sp. strain JS614 with ethene oxide Applied Microbiology and Biotechnology. 87: 2293-2302. PMID 20582588 DOI: 10.1007/S00253-010-2719-8 |
0.42 |
|
| 2010 |
Walker CB, de la Torre JR, Klotz MG, Urakawa H, Pinel N, Arp DJ, Brochier-Armanet C, Chain PS, Chan PP, Gollabgir A, Hemp J, Hügler M, Karr EA, Könneke M, Shin M, et al. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 107: 8818-23. PMID 20421470 DOI: 10.1073/Pnas.0913533107 |
0.39 |
|
| 2010 |
Sayavedra-Soto LA, Gvakharia B, Bottomley PJ, Arp DJ, Dolan ME. Nitrification and degradation of halogenated hydrocarbons--a tenuous balance for ammonia-oxidizing bacteria. Applied Microbiology and Biotechnology. 86: 435-44. PMID 20146060 DOI: 10.1007/S00253-010-2454-1 |
0.366 |
|
| 2010 |
Rasche ME, Arp DJ. Hydrogen inhibition of nitrogen reduction by nitrogenase in isolated soybean nodule bacteroids. Plant Physiology. 91: 663-8. PMID 16667084 DOI: 10.1104/Pp.91.2.663 |
0.312 |
|
| 2009 |
Cooley RB, Bottomley PJ, Arp DJ. Growth of a non-methanotroph on natural gas: ignoring the obvious to focus on the obscure. Environmental Microbiology Reports. 1: 408-13. PMID 23765894 DOI: 10.1111/J.1758-2229.2009.00060.X |
0.394 |
|
| 2009 |
Dubbels BL, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Thauera butanivorans sp. nov., a C2-C9 alkane-oxidizing bacterium previously referred to as 'Pseudomonas butanovora'. International Journal of Systematic and Evolutionary Microbiology. 59: 1576-8. PMID 19528200 DOI: 10.1099/Ijs.0.000638-0 |
0.397 |
|
| 2009 |
Cooley RB, Dubbels BL, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Kinetic characterization of the soluble butane monooxygenase from Thauera butanivorans, formerly 'Pseudomonas butanovora'. Microbiology (Reading, England). 155: 2086-96. PMID 19383682 DOI: 10.1099/Mic.0.028175-0 |
0.383 |
|
| 2009 |
Gvakharia BO, Bottomley PJ, Arp DJ, Sayavedra-Soto LA. Construction of recombinant Nitrosomonas europaea expressing green fluorescent protein in response to co-oxidation of chloroform. Applied Microbiology and Biotechnology. 82: 1179-85. PMID 19247648 DOI: 10.1007/S00253-009-1914-Y |
0.368 |
|
| 2008 |
Starkenburg SR, Arp DJ, Bottomley PJ. Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255. Environmental Microbiology. 10: 3036-42. PMID 18973623 DOI: 10.1111/J.1462-2920.2008.01763.X |
0.462 |
|
| 2008 |
Starkenburg SR, Arp DJ, Bottomley PJ. D-Lactate metabolism and the obligate requirement for CO2 during growth on nitrite by the facultative lithoautotroph Nitrobacter hamburgensis. Microbiology (Reading, England). 154: 2473-81. PMID 18667580 DOI: 10.1099/Mic.0.2008/018085-0 |
0.335 |
|
| 2008 |
Norton JM, Klotz MG, Stein LY, Arp DJ, Bottomley PJ, Chain PS, Hauser LJ, Land ML, Larimer FW, Shin MW, Starkenburg SR. Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment. Applied and Environmental Microbiology. 74: 3559-72. PMID 18390676 DOI: 10.1128/Aem.02722-07 |
0.369 |
|
| 2008 |
Starkenburg SR, Larimer FW, Stein LY, Klotz MG, Chain PS, Sayavedra-Soto LA, Poret-Peterson AT, Gentry ME, Arp DJ, Ward B, Bottomley PJ. Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter. Applied and Environmental Microbiology. 74: 2852-63. PMID 18326675 DOI: 10.1128/Aem.02311-07 |
0.379 |
|
| 2008 |
Doughty DM, Kurth EG, Sayavedra-Soto LA, Arp DJ, Bottomley PJ. Evidence for involvement of copper ions and redox state in regulation of butane monooxygenase in Pseudomonas butanovora. Journal of Bacteriology. 190: 2933-8. PMID 18281403 DOI: 10.1128/Jb.01409-07 |
0.415 |
|
| 2008 |
Kurth EG, Doughty DM, Bottomley PJ, Arp DJ, Sayavedra-Soto LA. Involvement of BmoR and BmoG in n-alkane metabolism in 'Pseudomonas butanovora'. Microbiology (Reading, England). 154: 139-47. PMID 18174133 DOI: 10.1099/Mic.0.2007/012724-0 |
0.359 |
|
| 2007 |
Stein LY, Arp DJ, Berube PM, Chain PS, Hauser L, Jetten MS, Klotz MG, Larimer FW, Norton JM, Op den Camp HJ, Shin M, Wei X. Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation. Environmental Microbiology. 9: 2993-3007. PMID 17991028 DOI: 10.1111/J.1462-2920.2007.01409.X |
0.352 |
|
| 2007 |
Doughty DM, Halsey KH, Vieville CJ, Sayavedra-Soto LA, Arp DJ, Bottomley PJ. Propionate inactivation of butane monooxygenase activity in 'Pseudomonas butanovora': biochemical and physiological implications. Microbiology (Reading, England). 153: 3722-9. PMID 17975080 DOI: 10.1099/Mic.0.2007/008441-0 |
0.724 |
|
| 2007 |
Dubbels BL, Sayavedra-Soto LA, Arp DJ. Butane monooxygenase of 'Pseudomonas butanovora': purification and biochemical characterization of a terminal-alkane hydroxylating diiron monooxygenase. Microbiology (Reading, England). 153: 1808-16. PMID 17526838 DOI: 10.1099/Mic.0.2006/004960-0 |
0.434 |
|
| 2007 |
Arp DJ, Chain PS, Klotz MG. The impact of genome analyses on our understanding of ammonia-oxidizing bacteria. Annual Review of Microbiology. 61: 503-28. PMID 17506671 DOI: 10.1146/Annurev.Micro.61.080706.093449 |
0.393 |
|
| 2007 |
Halsey KH, Doughty DM, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Evidence for modified mechanisms of chloroethene oxidation in Pseudomonas butanovora mutants containing single amino acid substitutions in the hydroxylase alpha-subunit of butane monooxygenase. Journal of Bacteriology. 189: 5068-74. PMID 17496103 DOI: 10.1128/Jb.00189-07 |
0.727 |
|
| 2006 |
Klotz MG, Arp DJ, Chain PS, El-Sheikh AF, Hauser LJ, Hommes NG, Larimer FW, Malfatti SA, Norton JM, Poret-Peterson AT, Vergez LM, Ward BB. Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707. Applied and Environmental Microbiology. 72: 6299-315. PMID 16957257 DOI: 10.1128/Aem.00463-06 |
0.364 |
|
| 2006 |
Halsey KH, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Site-directed amino acid substitutions in the hydroxylase alpha subunit of butane monooxygenase from Pseudomonas butanovora: Implications for substrates knocking at the gate. Journal of Bacteriology. 188: 4962-9. PMID 16788204 DOI: 10.1128/Jb.00280-06 |
0.725 |
|
| 2006 |
Wei X, Yan T, Hommes NG, Liu X, Wu L, McAlvin C, Klotz MG, Sayavedra-Soto LA, Zhou J, Arp DJ. Transcript profiles of Nitrosomonas europaea during growth and upon deprivation of ammonia and carbonate. Fems Microbiology Letters. 257: 76-83. PMID 16553835 DOI: 10.1111/J.1574-6968.2006.00152.X |
0.318 |
|
| 2006 |
Doughty DM, Sayavedra-Soto LA, Arp DJ, Bottomley PJ. Product repression of alkane monooxygenase expression in Pseudomonas butanovora. Journal of Bacteriology. 188: 2586-92. PMID 16547046 DOI: 10.1128/Jb.188.7.2586-2592.2006 |
0.395 |
|
| 2006 |
Starkenburg SR, Chain PS, Sayavedra-Soto LA, Hauser L, Land ML, Larimer FW, Malfatti SA, Klotz MG, Bottomley PJ, Arp DJ, Hickey WJ. Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255. Applied and Environmental Microbiology. 72: 2050-63. PMID 16517654 DOI: 10.1128/Aem.72.3.2050-2063.2006 |
0.408 |
|
| 2006 |
Hommes NG, Kurth EG, Sayavedra-Soto LA, Arp DJ. Disruption of sucA, which encodes the E1 subunit of alpha-ketoglutarate dehydrogenase, affects the survival of Nitrosomonas europaea in stationary phase. Journal of Bacteriology. 188: 343-7. PMID 16352852 DOI: 10.1128/Jb.188.1.343-347.2006 |
0.384 |
|
| 2006 |
Arp DJ, Bottomley PJ. Nitrifiers: More than 100 years from isolation to genome sequences Microbe. 1: 229-234. DOI: 10.1128/Microbe.1.229.1 |
0.392 |
|
| 2005 |
Doughty DM, Sayavedra-Soto LA, Arp DJ, Bottomley PJ. Effects of dichloroethene isomers on the induction and activity of butane monooxygenase in the alkane-oxidizing bacterium "Pseudomonas butanovora". Applied and Environmental Microbiology. 71: 6054-9. PMID 16204521 DOI: 10.1128/Aem.71.10.6054-6059.2005 |
0.426 |
|
| 2005 |
Sayavedra-Soto LA, Doughty DM, Kurth EG, Bottomley PJ, Arp DJ. Product and product-independent induction of butane oxidation in Pseudomonas butanovora. Fems Microbiology Letters. 250: 111-6. PMID 16055278 DOI: 10.1016/J.Femsle.2005.06.058 |
0.425 |
|
| 2005 |
Halsey KH, Sayavedra-Soto LA, Bottomley PJ, Arp DJ. Trichloroethylene degradation by butane-oxidizing bacteria causes a spectrum of toxic effects. Applied Microbiology and Biotechnology. 68: 794-801. PMID 15754184 DOI: 10.1007/S00253-005-1944-Z |
0.715 |
|
| 2004 |
Wei X, Sayavedra-Soto LA, Arp DJ. The transcription of the cbb operon in Nitrosomonas europaea. Microbiology (Reading, England). 150: 1869-79. PMID 15184573 DOI: 10.1099/Mic.0.26785-0 |
0.35 |
|
| 2004 |
Yeager CM, Arthur KM, Bottomley PJ, Arp DJ. Trichloroethylene degradation by toluene-oxidizing bacteria grown on non-aromatic substrates. Biodegradation. 15: 19-28. PMID 14971854 DOI: 10.1023/B:Biod.0000009947.09125.35 |
0.709 |
|
| 2004 |
Shiemke AK, Arp DJ, Sayavedra-Soto LA. Inhibition of membrane-bound methane monooxygenase and ammonia monooxygenase by diphenyliodonium: implications for electron transfer. Journal of Bacteriology. 186: 928-37. PMID 14761987 DOI: 10.1128/Jb.186.4.928-937.2004 |
0.339 |
|
| 2003 |
Arp DJ, Stein LY. Metabolism of inorganic N compounds by ammonia-oxidizing bacteria. Critical Reviews in Biochemistry and Molecular Biology. 38: 471-95. PMID 14695127 DOI: 10.1080/10409230390267446 |
0.449 |
|
| 2003 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. Chemolithoorganotrophic growth of Nitrosomonas europaea on fructose. Journal of Bacteriology. 185: 6809-14. PMID 14617645 DOI: 10.1128/Jb.185.23.6809-6814.2003 |
0.325 |
|
| 2003 |
Chain P, Lamerdin J, Larimer F, Regala W, Lao V, Land M, Hauser L, Hooper A, Klotz M, Norton J, Sayavedra-Soto L, Arciero D, Hommes N, Whittaker M, Arp D. Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea. Journal of Bacteriology. 185: 2759-73. PMID 12700255 DOI: 10.1128/Jb.185.9.2759-2773.2003 |
0.366 |
|
| 2002 |
Sluis MK, Sayavedra-Soto LA, Arp DJ. Molecular analysis of the soluble butane monooxygenase from 'Pseudomonas butanovora'. Microbiology (Reading, England). 148: 3617-29. PMID 12427952 DOI: 10.1099/00221287-148-11-3617 |
0.445 |
|
| 2002 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. The roles of the three gene copies encoding hydroxylamine oxidoreductase in Nitrosomonas europaea. Archives of Microbiology. 178: 471-6. PMID 12420168 DOI: 10.1007/S00203-002-0477-4 |
0.431 |
|
| 2002 |
Arp DJ, Sayavedra-Soto LA, Hommes NG. Molecular biology and biochemistry of ammonia oxidation by Nitrosomonas europaea. Archives of Microbiology. 178: 250-5. PMID 12209257 DOI: 10.1007/S00203-002-0452-0 |
0.455 |
|
| 2002 |
Vangnai AS, Sayavedra-Soto LA, Arp DJ. Roles for the two 1-butanol dehydrogenases of Pseudomonas butanovora in butane and 1-butanol metabolism. Journal of Bacteriology. 184: 4343-50. PMID 12142403 DOI: 10.1128/Jb.184.16.4343-4350.2002 |
0.664 |
|
| 2002 |
Beaumont HJ, Hommes NG, Sayavedra-Soto LA, Arp DJ, Arciero DM, Hooper AB, Westerhoff HV, van Spanning RJ. Nitrite reductase of Nitrosomonas europaea is not essential for production of gaseous nitrogen oxides and confers tolerance to nitrite. Journal of Bacteriology. 184: 2557-60. PMID 11948173 DOI: 10.1128/Jb.184.9.2557-2560.2002 |
0.425 |
|
| 2002 |
Vangnai AS, Arp DJ, Sayavedra-Soto LA. Two distinct alcohol dehydrogenases participate in butane metabolism by Pseudomonas butanovora. Journal of Bacteriology. 184: 1916-24. PMID 11889098 DOI: 10.1128/Jb.184.7.1916-1924.2002 |
0.689 |
|
| 2001 |
Yeager CM, Bottomley PJ, Arp DJ. Requirement of DNA repair mechanisms for survival of Burkholderia cepacia G4 upon degradation of trichloroethylene. Applied and Environmental Microbiology. 67: 5384-91. PMID 11722883 DOI: 10.1128/Aem.67.12.5384-5391.2001 |
0.675 |
|
| 2001 |
Arp DJ, Yeager CM, Hyman MR. Molecular and cellular fundamentals of aerobic cometabolism of trichloroethylene. Biodegradation. 12: 81-103. PMID 11710592 DOI: 10.1023/A:1012089908518 |
0.671 |
|
| 2001 |
Hamamura N, Yeager CM, Arp DJ. Two distinct monooxygenases for alkane oxidation in Nocardioides sp. strain CF8. Applied and Environmental Microbiology. 67: 4992-8. PMID 11679317 DOI: 10.1128/Aem.67.11.4992-4998.2001 |
0.777 |
|
| 2001 |
Sayavedra-Soto LA, Byrd CM, Arp DJ. Induction of butane consumption in Pseudomonas butanovora. Archives of Microbiology. 176: 114-20. PMID 11479710 DOI: 10.1007/S002030100304 |
0.403 |
|
| 2001 |
Yeager CM, Bottomley PJ, Arp DJ. Cytotoxicity associated with trichloroethylene oxidation in Burkholderia cepacia G4. Applied and Environmental Microbiology. 67: 2107-15. PMID 11319088 DOI: 10.1128/Aem.67.5.2107-2115.2001 |
0.682 |
|
| 2001 |
Vangnai AS, Arp DJ. An inducible 1-butanol dehydrogenase, a quinohaemoprotein, is involved in the oxidation of butane by "Pseudomonas butanovora". Microbiology (Reading, England). 147: 745-56. PMID 11238982 DOI: 10.1099/00221287-147-3-745 |
0.674 |
|
| 2001 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. Transcript analysis of multiple copies of amo (encoding ammonia monooxygenase) and hao (encoding hydroxylamine oxidoreductase) in Nitrosomonas europaea Journal of Bacteriology. 183: 1096-1100. PMID 11208810 DOI: 10.1128/Jb.183.3.1096-1100.2001 |
0.337 |
|
| 2000 |
Stein LY, Sayavedra-Soto LA, Hommes NG, Arp DJ. Differential regulation of amoA and amoB gene copies in Nitrosomonas europaea Fems Microbiology Letters. 192: 163-168. PMID 11064189 DOI: 10.1111/J.1574-6968.2000.Tb09376.X |
0.406 |
|
| 2000 |
Duddleston KN, Bottomley PJ, Porter AJ, Arp DJ. New insights into methyl bromide cooxidation by Nitrosomonas europaea obtained by experimenting with moderately low density cell suspensions. Applied and Environmental Microbiology. 66: 2726-31. PMID 10877761 DOI: 10.1128/Aem.66.7.2726-2731.2000 |
0.448 |
|
| 2000 |
Meek L, Arp DJ. The hydrogenase cytochrome b heme ligands of Azotobacter vinelandii are required for full H(2) oxidation capability. Journal of Bacteriology. 182: 3429-36. PMID 10852874 DOI: 10.1128/Jb.182.12.3429-3436.2000 |
0.349 |
|
| 2000 |
Duddleston KN, Bottomley PJ, Porter A, Arp DJ. Effects of soil and water content on methyl bromide oxidation by the ammonia-oxidizing bacterium Nitrosomonas europaea Applied and Environmental Microbiology. 66: 2636-2640. PMID 10831449 DOI: 10.1128/Aem.66.6.2636-2640.2000 |
0.318 |
|
| 2000 |
Hamamura N, Arp DJ. Isolation and characterization of alkane-utilizing Nocardioides sp. strain CF8. Fems Microbiology Letters. 186: 21-6. PMID 10779707 DOI: 10.1111/J.1574-6968.2000.Tb09076.X |
0.692 |
|
| 1999 |
Hamamura N, Storfa RT, Semprini L, Arp DJ. Diversity in butane monooxygenases among butane-grown bacteria. Applied and Environmental Microbiology. 65: 4586-93. PMID 10508093 DOI: 10.1128/Aem.65.10.4586-4593.1999 |
0.715 |
|
| 1999 |
Ely RL, Williamson KJ, Hyman MR, Arp DJ. Cometabolism of chlorinated solvents by nitrifying bacteria: kinetics, substrate interactions, toxicity effects, and bacterial response Biotechnology and Bioengineering. 63: 756. PMID 10397833 DOI: 10.1002/(Sici)1097-0290(19990620)63:6<756::Aid-Bit14>3.0.Co;2-Z |
0.394 |
|
| 1999 |
Arp DJ. Butane metabolism by butane-grown 'Pseudomonas butanovora' Microbiology. 145: 1173-1180. PMID 10376833 DOI: 10.1099/13500872-145-5-1173 |
0.421 |
|
| 1999 |
Yeager CM, Bottomley PJ, Arp DJ, Hyman MR. Inactivation of toluene 2-monooxygenase in Burkholderia cepacia G4 by alkynes. Applied and Environmental Microbiology. 65: 632-9. PMID 9925593 DOI: 10.1128/Aem.65.2.632-639.1999 |
0.662 |
|
| 1998 |
Stein LY, Arp DJ. Ammonium Limitation Results in the Loss of Ammonia-Oxidizing Activity in Nitrosomonas europaea. Applied and Environmental Microbiology. 64: 1514-21. PMID 16349550 DOI: 10.1128/Aem.64.4.1514-1521.1998 |
0.442 |
|
| 1998 |
Hommes NG, Russell SA, Bottomley PJ, Arp DJ. Effects of Soil on Ammonia, Ethylene, Chloroethane, and 1,1,1-Trichloroethane Oxidation by Nitrosomonas europaea. Applied and Environmental Microbiology. 64: 1372-8. PMID 16349541 DOI: 10.1128/Aem.64.4.1372-1378.1998 |
0.321 |
|
| 1998 |
Keener WK, Russell SA, Arp DJ. Kinetic characterization of the inactivation of ammonia monooxygenase in Nitrosomonas europaea by alkyne, aniline and cyclopropane derivatives. Biochimica Et Biophysica Acta. 1388: 373-85. PMID 9858770 DOI: 10.1016/S0167-4838(98)00188-5 |
0.393 |
|
| 1998 |
Sayavedra-Soto LA, Hommes NG, Alzerreca JJ, Arp DJ, Norton JM, Klotz MG. Transcription of the amoC, amoA and amoB genes in Nitrosomonas europaea and Nitrosospira sp. NpAV. Fems Microbiology Letters. 167: 81-8. PMID 9785456 DOI: 10.1111/J.1574-6968.1998.Tb13211.X |
0.341 |
|
| 1998 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. Mutagenesis and expression of amo, which codes for ammonia monooxygenase in Nitrosomonas europaea Journal of Bacteriology. 180: 3353-3359. PMID 9642187 DOI: 10.1128/Jb.180.13.3353-3359.1998 |
0.353 |
|
| 1998 |
Stein LY, Arp DJ. Ammonium limitation results in the loss of ammonia oxidizing activity in Nitrosomonas europaea Applied and Environmental Microbiology. 64: 1514-1521. |
0.336 |
|
| 1998 |
Stein LY, Arp DJ. Loss of ammonia monooxygenase activity in Nitrosomonas europaea upon exposure to nitrite Applied and Environmental Microbiology. 64: 4098-4102. |
0.307 |
|
| 1997 |
Hamamura N, Page C, Long T, Semprini L, Arp DJ. Chloroform Cometabolism by Butane-Grown CF8, Pseudomonas butanovora, and Mycobacterium vaccae JOB5 and Methane-Grown Methylosinus trichosporium OB3b. Applied and Environmental Microbiology. 63: 3607-13. PMID 16535693 DOI: 10.1128/Aem.63.9.3607-3613.1997 |
0.648 |
|
| 1997 |
Kim Y, Semprini L, Arp DJ. Aerobic cometabolism of chloroform and 1, 1, 1-trichloroethane by butane-grown microorganisms Bioremediation Journal. 1: 135-148. DOI: 10.1080/10889869709351328 |
0.301 |
|
| 1996 |
Sayavedra-Soto LA, Hommes NG, Russell SA, Arp DJ. Induction of ammonia monooxygenase and hydroxylamine oxidoreductase mRNAs by ammonium in Nitrosomonas europaea. Molecular Microbiology. 20: 541-8. PMID 8736533 DOI: 10.1046/J.1365-2958.1996.5391062.X |
0.31 |
|
| 1996 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. Mutagenesis of hydroxylamine oxidoreductase in Nitrosomonas europaea by transformation and recombination Journal of Bacteriology. 178: 3710-3714. PMID 8682770 DOI: 10.1128/Jb.178.13.3710-3714.1996 |
0.365 |
|
| 1996 |
McTavish H, Sayavedra-Soto LA, Arp DJ. Comparison of isotope exchange, H2 evolution, and H2 oxidation activities of Azotobacter vinelandii hydrogenase Biochimica Et Biophysica Acta - Protein Structure and Molecular Enzymology. 1294: 183-190. PMID 8645737 DOI: 10.1016/0167-4838(96)00020-9 |
0.318 |
|
| 1995 |
Ely RL, Hyman MR, Arp DJ, Guenther RB, Williamson KJ. A cometabolic kinetics model incoroporating enzyme inhibition, inactivation, and recovery: II. Trichloroethylene degradaation experiments. Biotechnology and Bioengineering. 46: 232-45. PMID 18623307 DOI: 10.1002/Bit.260460306 |
0.396 |
|
| 1995 |
Ely RL, Williamson KJ, Guenther RB, Hyman MR, Arp DJ. A cometabilic kinetics model incorporating enzyme inhbition, inactivation, and recovery: I. Model development, analysis, and testing. Biotechnology and Bioengineering. 46: 218-31. PMID 18623306 DOI: 10.1002/Bit.260460305 |
0.334 |
|
| 1995 |
Parks TD, Howard ED, Wolpert TJ, Arp DJ, Dougherty WG. Expression and purification of a recombinant tobacco etch virus NIa proteinase: biochemical analyses of the full-length and a naturally occurring truncated proteinase form. Virology. 210: 194-201. PMID 7793070 DOI: 10.1006/Viro.1995.1331 |
0.31 |
|
| 1995 |
Hyman MR, Arp DJ. Effects of ammonia on the de novo synthesis of polypeptides in cells of Nitrosomonas europaea denied ammonia as an energy source Journal of Bacteriology. 177: 4974-4979. PMID 7665474 DOI: 10.1128/Jb.177.17.4974-4979.1995 |
0.358 |
|
| 1995 |
Juliette LY, Hyman MR, Arp DJ. Roles of bovine serum albumin and copper in the assay and stability of ammonia monooxygenase activity in vitro Journal of Bacteriology. 177: 4908-4913. PMID 7665467 DOI: 10.1128/Jb.177.17.4908-4913.1995 |
0.362 |
|
| 1995 |
McTavish H, Sayavedra-Soto LA, Arp DJ. Substitution of Azotobacter vinelandii hydrogenase small-subunit cysteines by serines can create insensitivity to inhibition by O2 and preferentially damages H2 oxidation over H2 evolution Journal of Bacteriology. 177: 3960-3964. PMID 7608067 DOI: 10.1128/Jb.177.14.3960-3964.1995 |
0.362 |
|
| 1995 |
Arp DJ. Understanding the diversity of trichloroethene co-oxidations Current Opinion in Biotechnology. 6: 352-358. DOI: 10.1016/0958-1669(95)80059-X |
0.383 |
|
| 1995 |
Hyman MR, Russell SA, Ely RL, Williamson KJ, Arp DJ. Inhibition, inactivation, and recovery of ammonia-oxidizing activity in cometabolism of trichloroethylene by Nitrosomonas europaea Applied and Environmental Microbiology. 61: 1480-1487. |
0.348 |
|
| 1994 |
Sayavedra-Soto LA, Hommes NG, Arp DJ. Characterization of the gene encoding hydroxylamine oxidoreductase in Nitrosomonas europaea Journal of Bacteriology. 176: 504-510. PMID 8288544 DOI: 10.1128/Jb.176.2.504-510.1994 |
0.358 |
|
| 1994 |
Hommes NG, Sayavedra-Soto LA, Arp DJ. Sequence of hcy, a gene encoding cytochrome c-554 from Nitrosomonas europaea Gene. 146: 87-89. PMID 8063110 DOI: 10.1016/0378-1119(94)90838-9 |
0.322 |
|
| 1994 |
Keener WK, Arp DJ. Transformations of aromatic compounds by Nitrosomonas europaea Applied and Environmental Microbiology. 60: 1914-1920. DOI: 10.1128/Aem.60.6.1914-1920.1994 |
0.409 |
|
| 1993 |
Sayavedra-Soto LA, Arp DJ. In Azotobacter vinelandii hydrogenase, substitution of serine for the cysteine residues at positions 62, 65, 289, and 292 in the small (HoxK) subunit affects H2 oxidation Journal of Bacteriology. 175: 3414-3421. PMID 8501046 DOI: 10.1128/Jb.175.11.3414-3421.1993 |
0.379 |
|
| 1993 |
Ensign SA, Hyman MR, Arp DJ. In vitro activation of ammonia monooxygenase from Nitrosomonas europaea by copper Journal of Bacteriology. 175: 1971-1980. PMID 8458839 DOI: 10.1128/Jb.175.7.1971-1980.1993 |
0.349 |
|
| 1993 |
Keener WK, Arp DJ. Kinetic studies of ammonia monooxygenase inhibition in Nitrosomonas europaea by hydrocarbons and halogenated hydrocarbons in an optimized whole- cell assay Applied and Environmental Microbiology. 59: 2501-2510. DOI: 10.1128/Aem.59.8.2501-2510.1993 |
0.393 |
|
| 1993 |
Juliette LY, Hyman MR, Arp DJ. Mechanism-based inactivation of ammonia monooxygenase in Nitrosomonas europaea by allylsulfide Applied and Environmental Microbiology. 59: 3728-3735. DOI: 10.1128/Aem.59.11.3728-3735.1993 |
0.366 |
|
| 1993 |
Juliette LY, Hyman MR, Arp DJ. Inhibition of ammonia oxidation in Nitrosomonas europaea by sulfur compounds: Thioethers are oxidized to sulfoxides by ammonia monooxygenase Applied and Environmental Microbiology. 59: 3718-3727. DOI: 10.1128/Aem.59.11.3718-3727.1993 |
0.43 |
|
| 1992 |
Sayavedra-Soto LA, Arp DJ. The hoxZ gene of the Azotobacter vinelandii hydrogenase operon is required for activation of hydrogenase Journal of Bacteriology. 174: 5295-5301. PMID 1644756 DOI: 10.1128/Jb.174.16.5295-5301.1992 |
0.413 |
|
| 1992 |
Ensign SA, Hyman MR, Arp DJ. Cometabolic degradation of chlorinated alkenes by alkene monooxygenase in a propylene-grown Xanthobacter strain Applied and Environmental Microbiology. 58: 3038-3046. PMID 1444418 DOI: 10.1128/Aem.58.9.3038-3046.1992 |
0.481 |
|
| 1992 |
Hyman MR, Seefeldt LC, Vance Morgan T, Arp DJ, Mortenson LE. Kinetic and spectroscopic analysis of the inactivating effects of nitric oxide on the individual components of Azotobacter vinelandii nitrogenase Biochemistry®. 31: 2947-2955. PMID 1312859 DOI: 10.1021/Bi00126A015 |
0.377 |
|
| 1991 |
Sun J, Arp DJ. Aerobically purified hydrogenase from Azotobacter vinelandii: Activity, activation, and spectral properties Archives of Biochemistry and Biophysics. 287: 225-233. PMID 1898001 DOI: 10.1016/0003-9861(91)90411-B |
0.35 |
|
| 1991 |
Rasche ME, Hyman MR, Arp DJ. Factors limiting aliphatic chlorocarbon degradation by Nitrosomonas europaea: Cometabolic inactivation of ammonia monooxygenase and substrate specificity Applied and Environmental Microbiology. 57: 2986-2994. DOI: 10.1128/Aem.57.10.2986-2994.1991 |
0.435 |
|
| 1990 |
Rasche ME, Hicks RE, Hyman MR, Arp DJ. Oxidation of monohalogenated ethanes and n-chlorinated alkanes by whole cells of Nitrosomonas europaea. Journal of Bacteriology. 172: 5368-73. PMID 2394686 DOI: 10.1128/Jb.172.9.5368-5373.1990 |
0.323 |
|
| 1989 |
Hyman MR, Ensign SA, Arp DJ, Ludden PW. Carbonyl sulfide inhibition of CO dehydrogenase from Rhodospirillum rubrum Biochemistry. 28: 6821-6826. PMID 2510818 DOI: 10.1021/Bi00443A007 |
0.318 |
|
| 1989 |
Seefeldt LC, Arp DJ. Oxygen effects on the nickel- and iron-containing hydrogenase from Azotobacter vinelandii Biochemistry. 28: 1588-1596. DOI: 10.1021/Bi00430A025 |
0.323 |
|
| 1988 |
Hyman MR, Murton IB, Arp DJ. Interaction of Ammonia Monooxygenase from Nitrosomonas europaea with Alkanes, Alkenes, and Alkynes Applied and Environmental Microbiology. 54: 3187-3190. DOI: 10.1128/Aem.54.12.3187-3190.1988 |
0.384 |
|
| 1987 |
Hyman MR, Arp DJ. Quantification and removal of some contaminating gases from acetylene used to study gas-utilizing enzymes and microorganisms Applied and Environmental Microbiology. 53: 298-303. DOI: 10.1128/Aem.53.2.298-303.1987 |
0.306 |
|
| 1987 |
Hyman MR, Arp DJ. Acetylene is an active-site-directed, slow-binding, reversible inhibitor of Azotobacter vinelandii hydrogenase Biochemistry. 26: 6447-6454. DOI: 10.1021/Bi00394A023 |
0.335 |
|
| 1985 |
Arp DJ, McCollum LC, Seefeldt LC. Molecular and immunological comparison of membrane-bound, H2-oxidizing hydrogenases of Bradyrhizobium japonicum, Alcaligenes eutrophus, Alcaligenes latus, and Azotobacter vinelandii. Journal of Bacteriology. 163: 15-20. PMID 4008438 DOI: 10.1128/Jb.163.1.15-20.1985 |
0.313 |
|
| 1981 |
Arp DJ, Burris RH. Kinetic mechanism of the hydrogen-oxidizing hydrogenase from soybean nodule bacteroids. Biochemistry. 20: 2234-40. PMID 7016176 DOI: 10.1021/Bi00511A025 |
0.326 |
|
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