Youyi Fong, Ph.D. - Publications

Affiliations: 
2000 Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Molecular Biology

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zhao LP, Fiore-Gartland A, Carpp LN, Cohen KW, Rouphael N, Fleurs L, Dintwe O, Zhao M, Moodie Z, Fong Y, Garrett N, Huang Y, Innes C, Janes HE, Lazarus E, et al. Landscapes of binding antibody and T-cell responses to pox-protein HIV vaccines in Thais and South Africans. Plos One. 15: e0226803. PMID 31999736 DOI: 10.1371/Journal.Pone.0226803  0.364
2019 Neidich SD, Fong Y, Li SS, Geraghty DE, Williamson BD, Young WC, Goodman D, Seaton KE, Shen X, Sawant S, Zhang L, deCamp AC, Blette BS, Shao M, Yates NL, et al. Antibody Fc effector functions and IgG3 associate with decreased HIV-1 risk. The Journal of Clinical Investigation. PMID 31589165 DOI: 10.1172/Jci126391  0.349
2019 Li SS, Gilbert PB, Carpp LN, Pyo CW, Janes H, Fong Y, Shen X, Neidich SD, Goodman D, deCamp A, Cohen KW, Ferrari G, Hammer SM, Sobieszczyk ME, Mulligan MJ, et al. Fc gamma receptor polymorphisms modulated the vaccine effect on HIV-1 risk in the HVTN 505 HIV vaccine trial. Journal of Virology. PMID 31434737 DOI: 10.1128/Jvi.02041-18  0.351
2019 He Z, Fong Y. Maximum diversity weighting for biomarkers with application in HIV-1 vaccine studies. Statistics in Medicine. PMID 31215662 DOI: 10.1002/Sim.8212  0.32
2018 Fong Y, Shen X, Ashley VC, Deal A, Seaton KE, Yu C, Grant SP, Ferrari G, deCamp AC, Bailer RT, Koup RA, Montefiori D, Haynes BF, Sarzotti-Kelsoe M, Graham BS, et al. Vaccine-induced antibody responses modify the association between T-cell immune responses and HIV-1 infection risk in HVTN 505. The Journal of Infectious Diseases. PMID 29325070 DOI: 10.1093/Infdis/Jiy008  0.358
2017 Moodie Z, Juraska M, Huang Y, Zhuang Y, Fong Y, Carpp LN, Self SG, Chambonneau L, Small R, Jackson N, Noriega F, Gilbert PB. Neutralizing Antibody Correlates Analysis of Tetravalent Dengue Vaccine Efficacy Trials in Asia and Latin America. The Journal of Infectious Diseases. PMID 29194547 DOI: 10.1093/Infdis/Jix609  0.305
2017 McGuire EP, Fong Y, Toote C, Cunningham CK, McFarland EJ, Borkowsky W, Barnett S, Itell HL, Kumar A, Gray G, McElrath MJ, Tomaras GD, Permar SR, Fouda GG. HIV exposed infants vaccinated with a MF59/rgp120 vaccine have higher magnitude anti-V1V2 IgG responses than adults immunized with the same vaccine. Journal of Virology. PMID 29021402 DOI: 10.1128/Jvi.01070-17  0.315
2016 Fong Y, Di C, Huang Y, Gilbert PB. Model-robust inference for continuous threshold regression models. Biometrics. PMID 27858965 DOI: 10.1111/Biom.12623  0.305
2015 Prentice HA, Tomaras GD, Geraghty DE, Apps R, Fong Y, Ehrenberg PK, Rolland M, Kijak GH, Krebs SJ, Nelson W, DeCamp A, Shen X, Yates NL, Zolla-Pazner S, Nitayaphan S, et al. HLA class II genes modulate vaccine-induced antibody responses to affect HIV-1 acquisition. Science Translational Medicine. 7: 296ra112. PMID 26180102 DOI: 10.1126/Scitranslmed.Aab4005  0.326
2015 Permar SR, Fong Y, Vandergrift N, Fouda GG, Gilbert P, Parks R, Jaeger FH, Pollara J, Martelli A, Liebl BE, Lloyd K, Yates NL, Overman RG, Shen X, Whitaker K, et al. Maternal HIV-1 envelope-specific antibody responses and reduced risk of perinatal transmission. The Journal of Clinical Investigation. 125: 2702-6. PMID 26053661 DOI: 10.1172/Jci81593  0.329
2015 Fong Y, Gilbert P. Calibration weighted estimation of semiparametric transformation models for two-phase sampling. Statistics in Medicine. 34: 1695-707. PMID 25648332 DOI: 10.1002/Sim.6439  0.324
2015 Fong Y, Di C, Permar S. Change point testing in logistic regression models with interaction term. Statistics in Medicine. 34: 1483-94. PMID 25612253 DOI: 10.1002/Sim.6419  0.301
2015 Fong Y, Datta S, Georgiev IS, Kwong PD, Tomaras GD. Kernel-based logistic regression model for protein sequence without vectorialization. Biostatistics (Oxford, England). 16: 480-92. PMID 25532524 DOI: 10.1093/Biostatistics/Kxu056  0.365
2015 Cumberland WN, Fong Y, Yu X, Defawe O, Frahm N, De Rosa S. Nonlinear Calibration Model Choice between the Four and Five-Parameter Logistic Models. Journal of Biopharmaceutical Statistics. 25: 972-83. PMID 24918306 DOI: 10.1080/10543406.2014.920345  0.312
2014 Huang Y, Fong Y. Identifying optimal biomarker combinations for treatment selection via a robust kernel method. Biometrics. 70: 891-901. PMID 25124089 DOI: 10.1111/Biom.12204  0.318
2014 Li SS, Gilbert PB, Tomaras GD, Kijak G, Ferrari G, Thomas R, Pyo CW, Zolla-Pazner S, Montefiori D, Liao HX, Nabel G, Pinter A, Evans DT, Gottardo R, Dai JY, ... ... Fong Y, et al. FCGR2C polymorphisms associate with HIV-1 vaccine protection in RV144 trial. The Journal of Clinical Investigation. 124: 3879-90. PMID 25105367 DOI: 10.1172/Jci75539  0.347
2014 Gartland AJ, Li S, McNevin J, Tomaras GD, Gottardo R, Janes H, Fong Y, Morris D, Geraghty DE, Kijak GH, Edlefsen PT, Frahm N, Larsen BB, Tovanabutra S, Sanders-Buell E, et al. Analysis of HLA A*02 association with vaccine efficacy in the RV144 HIV-1 vaccine trial. Journal of Virology. 88: 8242-55. PMID 24829343 DOI: 10.1128/Jvi.01164-14  0.345
2014 Yates NL, Liao HX, Fong Y, deCamp A, Vandergrift NA, Williams WT, Alam SM, Ferrari G, Yang ZY, Seaton KE, Berman PW, Alpert MD, Evans DT, O'Connell RJ, Francis D, et al. Vaccine-induced Env V1-V2 IgG3 correlates with lower HIV-1 infection risk and declines soon after vaccination. Science Translational Medicine. 6: 228ra39. PMID 24648342 DOI: 10.1126/Scitranslmed.3007730  0.364
2014 Zolla-Pazner S, deCamp A, Gilbert PB, Williams C, Yates NL, Williams WT, Howington R, Fong Y, Morris DE, Soderberg KA, Irene C, Reichman C, Pinter A, Parks R, Pitisuttithum P, et al. Vaccine-induced IgG antibodies to V1V2 regions of multiple HIV-1 subtypes correlate with decreased risk of HIV-1 infection. Plos One. 9: e87572. PMID 24504509 DOI: 10.1371/Journal.Pone.0087572  0.369
2013 Tomaras GD, Ferrari G, Shen X, Alam SM, Liao HX, Pollara J, Bonsignori M, Moody MA, Fong Y, Chen X, Poling B, Nicholson CO, Zhang R, Lu X, Parks R, et al. Vaccine-induced plasma IgA specific for the C1 region of the HIV-1 envelope blocks binding and effector function of IgG. Proceedings of the National Academy of Sciences of the United States of America. 110: 9019-24. PMID 23661056 DOI: 10.1073/Pnas.1301456110  0.348
2013 Liu P, Yates NL, Shen X, Bonsignori M, Moody MA, Liao HX, Fong Y, Alam SM, Overman RG, Denny T, Ferrari G, Ochsenbauer C, Kappes JC, Polonis VR, Pitisuttithum P, et al. Infectious virion capture by HIV-1 gp120-specific IgG from RV144 vaccinees. Journal of Virology. 87: 7828-36. PMID 23658446 DOI: 10.1128/Jvi.02737-12  0.347
2012 Fong Y, Wakefield J, Rosa SD, Frahm N. A Robust Bayesian Random Effects Model for Nonlinear Calibration Problems Biometrics. 68: 1103-1112. PMID 22551415 DOI: 10.1111/J.1541-0420.2012.01762.X  0.301
2012 Haynes BF, Gilbert PB, McElrath MJ, Zolla-Pazner S, Tomaras GD, Alam SM, Evans DT, Montefiori DC, Karnasuta C, Sutthent R, Liao HX, DeVico AL, Lewis GK, Williams C, Pinter A, ... Fong Y, et al. Immune-correlates analysis of an HIV-1 vaccine efficacy trial. The New England Journal of Medicine. 366: 1275-86. PMID 22475592 DOI: 10.1056/Nejmoa1113425  0.359
2006 Bender LB, Suh J, Carroll CR, Fong Y, Fingerman IM, Briggs SD, Cao R, Zhang Y, Reinke V, Strome S. MES-4: an autosome-associated histone methyltransferase that participates in silencing the X chromosomes in the C. elegans germ line. Development (Cambridge, England). 133: 3907-17. PMID 16968818 DOI: 10.1242/Dev.02584  0.543
2002 Fong Y, Bender L, Wang W, Strome S. Regulation of the different chromatin states of autosomes and X chromosomes in the germ line of C. elegans. Science (New York, N.Y.). 296: 2235-8. PMID 12077420 DOI: 10.1126/Science.1070790  0.61
2001 Xu L, Fong Y, Strome S. The Caenorhabditis elegans maternal-effect sterile proteins, MES-2, MES-3, and MES-6, are associated in a complex in embryos. Proceedings of the National Academy of Sciences of the United States of America. 98: 5061-6. PMID 11320248 DOI: 10.1073/Pnas.081016198  0.548
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