Myron Goodman - Publications

Affiliations: 
University of Southern California, Los Angeles, CA, United States 
Area:
Molecular Biology, Biochemistry

253 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

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Year Citation  Score
2020 Henrikus SS, Henry C, McGrath AE, Jergic S, McDonald JP, Hellmich Y, Bruckbauer ST, Ritger ML, Cherry ME, Wood EA, Pham PT, Goodman MF, Woodgate R, Cox MM, van Oijen AM, et al. Single-molecule live-cell imaging reveals RecB-dependent function of DNA polymerase IV in double strand break repair. Nucleic Acids Research. PMID 32687193 DOI: 10.1093/nar/gkaa597  0.76
2019 Pham P, Malik S, Mak C, Calabrese PC, Roeder RG, Goodman MF. AID-RNA polymerase II transcription-dependent deamination of IgV DNA. Nucleic Acids Research. PMID 31566237 DOI: 10.1093/nar/gkz821  0.8
2019 Walsh E, Henrikus SS, Vaisman A, Makiela-Dzbenska K, Armstrong TJ, Łazowski K, McDonald JP, Goodman MF, van Oijen AM, Jonczyk P, Fijalkowska IJ, Robinson A, Woodgate R. Role of RNase H enzymes in maintaining genome stability in Escherichia coli expressing a steric-gate mutant of pol V. Dna Repair. 102685. PMID 31543434 DOI: 10.1016/j.dnarep.2019.102685  0.76
2019 Mak CH, Pham P, Goodman MF. Random Walk Enzymes: Information Theory, Quantum Isomorphism and Entropy Dispersion. The Journal of Physical Chemistry. A. PMID 30848911 DOI: 10.1021/acs.jpca.9b00910  0.8
2019 Jaszczur MM, Vo DD, Stanciauskas R, Bertram JG, Sikand A, Cox MM, Woodgate R, Mak CH, Pinaud F, Goodman MF. Conformational regulation of Escherichia coli DNA polymerase V by RecA and ATP. Plos Genetics. 15: e1007956. PMID 30716079 DOI: 10.1371/journal.pgen.1007956  0.76
2018 Henrikus SS, Wood EA, McDonald JP, Cox MM, Woodgate R, Goodman MF, van Oijen AM, Robinson A. DNA polymerase IV primarily operates outside of DNA replication forks in Escherichia coli. Plos Genetics. 14: e1007161. PMID 29351274 DOI: 10.1371/journal.pgen.1007161  0.76
2017 Eid MMA, Shimoda M, Singh SK, Almofty SA, Pham P, Goodman MF, Maeda K, Sakaguchi N. Integrity of immunoglobulin variable region is supported by GANP during AID-induced somatic hypermutation in germinal center B cells. International Immunology. PMID 28541550 DOI: 10.1093/intimm/dxx032  0.8
2017 Pham P, Afif SA, Shimoda M, Maeda K, Sakaguchi N, Pedersen LC, Goodman MF. Activation-induced deoxycytidine deaminase: Structural basis for favoring WRC hot motif specificities unique among APOBEC family members. Dna Repair. 54: 8-12. PMID 28388461 DOI: 10.1016/j.dnarep.2017.03.007  0.8
2016 Goodman MF. Better living with hyper-mutation. Environmental and Molecular Mutagenesis. PMID 27273795 DOI: 10.1002/em.22023  1
2016 Pham P, Afif SA, Shimoda M, Maeda K, Sakaguchi N, Pedersen LC, Goodman MF. Structural analysis of the activation-induced deoxycytidine deaminase required in immunoglobulin diversification. Dna Repair. 43: 48-56. PMID 27258794 DOI: 10.1016/j.dnarep.2016.05.029  0.8
2016 Goodman MF, McDonald JP, Jaszczur MM, Woodgate R. Insights into the complex levels of regulation imposed on Escherichia coli DNA polymerase V. Dna Repair. PMID 27236212 DOI: 10.1016/j.dnarep.2016.05.005  1
2016 Oertell K, Harcourt EM, Mohsen MG, Petruska J, Kool ET, Goodman MF. Kinetic selection vs. free energy of DNA base pairing in control of polymerase fidelity. Proceedings of the National Academy of Sciences of the United States of America. PMID 27044101 DOI: 10.1073/pnas.1600279113  1
2016 Jaszczur M, Bertram JG, Robinson A, van Oijen AM, Woodgate R, Cox MM, Goodman MF. Mutations for Worse or Better: Low-Fidelity DNA Synthesis by SOS DNA Polymerase V Is a Tightly Regulated Double-Edged Sword. Biochemistry. 55: 2309-18. PMID 27043933 DOI: 10.1021/acs.biochem.6b00117  0.76
2016 French JD, Johnatty SE, Lu Y, Beesley J, Gao B, Kalimutho M, Henderson MJ, Russell AJ, Kar S, Chen X, Hillman KM, Kaufmann S, Sivakumaran H, O'Reilly M, Wang C, ... ... Goodman MT, et al. Germline polymorphisms in an enhancer of PSIP1 are associated with progression-free survival in epithelial ovarian cancer. Oncotarget. PMID 26840454 DOI: 10.18632/oncotarget.7047  0.44
2015 Bolton KL, Tyrer J, Song H, Ramus SJ, Notaridou M, Jones C, Sher T, Gentry-Maharaj A, Wozniak E, Tsai YY, Weidhaas J, Paik D, Van Den Berg DJ, Stram DO, Pearce CL, ... ... Goodman MT, et al. Corrigendum: Common variants at 19p13 are associated with susceptibility to ovarian cancer. Nature Genetics. 48: 101. PMID 26711112 DOI: 10.1038/ng0116-101b  0.44
2015 Senavirathne G, Bertram JG, Jaszczur M, Chaurasiya KR, Pham P, Mak CH, Goodman MF, Rueda D. Activation-induced deoxycytidine deaminase (AID) co-transcriptional scanning at single-molecule resolution. Nature Communications. 6: 10209. PMID 26681117 DOI: 10.1038/ncomms10209  1
2015 Mak CH, Pham P, Afif SA, Goodman MF. Random-walk enzymes. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 92: 032717. PMID 26465508 DOI: 10.1103/PhysRevE.92.032717  0.8
2015 Basturk O, Saka B, Balci S, Postlewait LM, Knight J, Goodman M, Kooby D, Sarmiento JM, El-Rayes B, Choi H, Bagci P, Krasinskas A, Quigley B, Reid MD, Akkas G, et al. Substaging of Lymph Node Status in Resected Pancreatic Ductal Adenocarcinoma Has Strong Prognostic Correlations: Proposal for a Revised N Classification for TNM Staging. Annals of Surgical Oncology. PMID 26362048 DOI: 10.1245/s10434-015-4861-0  0.36
2015 Robinson A, McDonald JP, Caldas VE, Patel M, Wood EA, Punter CM, Ghodke H, Cox MM, Woodgate R, Goodman MF, van Oijen AM. Regulation of Mutagenic DNA Polymerase V Activation in Space and Time. Plos Genetics. 11: e1005482. PMID 26317348 DOI: 10.1371/journal.pgen.1005482  0.76
2015 Shaib W, Krishna K, Kim S, Goodman M, Rock J, Chen Z, Brutcher E, Staley CI, Maithel SK, Abdel-Missih S, El-Rayes BF, Bekaii-Saab T. Appendiceal Neuroendocrine, Goblet and Signet-Ring Cell Tumors: A Spectrum of Diseases with Different Patterns of Presentation and Outcome. Cancer Research and Treatment : Official Journal of Korean Cancer Association. PMID 26044156 DOI: 10.4143/crt.2015.029  0.36
2015 Gruber AJ, Erdem AL, Sabat G, Karata K, Jaszczur MM, Vo DD, Olsen TM, Woodgate R, Goodman MF, Cox MM. A RecA protein surface required for activation of DNA polymerase V. Plos Genetics. 11: e1005066. PMID 25811184 DOI: 10.1371/journal.pgen.1005066  0.76
2015 Balci S, Basturk O, Saka B, Bagci P, Postlewait LM, Tajiri T, Jang KT, Ohike N, Kim GE, Krasinskas A, Choi H, Sarmiento JM, Kooby DA, El-Rayes BF, Knight JH, ... Goodman M, et al. Substaging Nodal Status in Ampullary Carcinomas has Significant Prognostic Value: Proposed Revised Staging Based on an Analysis of 313 Well-Characterized Cases. Annals of Surgical Oncology. PMID 25783680 DOI: 10.1245/s10434-015-4499-y  0.36
2015 Yang HP, Cook LS, Weiderpass E, Adami HO, Anderson KE, Cai H, Cerhan JR, Clendenen TV, Felix AS, Friedenreich CM, Garcia-Closas M, Goodman MT, Liang X, Lissowska J, Lu L, et al. Infertility and incident endometrial cancer risk: a pooled analysis from the epidemiology of endometrial cancer consortium (E2C2). British Journal of Cancer. 112: 925-33. PMID 25688738 DOI: 10.1038/bjc.2015.24  0.32
2014 Goodman MF. The discovery of error-prone DNA polymerase V and its unique regulation by RecA and ATP. The Journal of Biological Chemistry. 289: 26772-82. PMID 25160630 DOI: 10.1074/jbc.X114.607374  1
2014 Reha-Krantz LJ, Woodgate S, Goodman MF. Engineering processive DNA polymerases with maximum benefit at minimum cost. Frontiers in Microbiology. 5: 380. PMID 25136334 DOI: 10.3389/fmicb.2014.00380  1
2014 Erdem AL, Jaszczur M, Bertram JG, Woodgate R, Cox MM, Goodman MF. DNA polymerase V activity is autoregulated by a novel intrinsic DNA-dependent ATPase. Elife. 3: e02384. PMID 24843026  0.76
2014 Oertell K, Chamberlain BT, Wu Y, Ferri E, Kashemirov BA, Beard WA, Wilson SH, McKenna CE, Goodman MF. Transition state in DNA polymerase β catalysis: rate-limiting chemistry altered by base-pair configuration. Biochemistry. 53: 1842-8. PMID 24580380 DOI: 10.1021/bi500101z  1
2014 Donigan KA, McLenigan MP, Yang W, Goodman MF, Woodgate R. The steric gate of DNA polymerase ι regulates ribonucleotide incorporation and deoxyribonucleotide fidelity. The Journal of Biological Chemistry. 289: 9136-45. PMID 24532793 DOI: 10.1074/jbc.M113.545442  1
2014 Vaisman A, McDonald JP, Noll S, Huston D, Loeb G, Goodman MF, Woodgate R. Investigating the mechanisms of ribonucleotide excision repair in Escherichia coli. Mutation Research. 761: 21-33. PMID 24495324 DOI: 10.1016/j.mrfmmm.2014.01.005  0.76
2014 Shakhmin A, Jones JP, Bychinskaya I, Zibinsky M, Oertell K, Goodman MF, Prakash GKS. Preparation of fluorinated RNA nucleotide analogs potentially stable to enzymatic hydrolysis in RNA and DNA polymerase assays Journal of Fluorine Chemistry. DOI: 10.1016/j.jfluchem.2014.07.019  1
2013 Maeda K, Almofty SA, Singh SK, Eid MM, Shimoda M, Ikeda T, Koito A, Pham P, Goodman MF, Sakaguchi N. GANP interacts with APOBEC3G and facilitates its encapsidation into the virions to reduce HIV-1 infectivity. Journal of Immunology (Baltimore, Md. : 1950). 191: 6030-9. PMID 24198285 DOI: 10.4049/jimmunol.1302057  0.8
2013 Mak CH, Pham P, Afif SA, Goodman MF. A mathematical model for scanning and catalysis on single-stranded DNA, illustrated with activation-induced deoxycytidine deaminase. The Journal of Biological Chemistry. 288: 29786-95. PMID 23979486 DOI: 10.1074/jbc.M113.506550  1
2013 Pham P, Landolph A, Mendez C, Li N, Goodman MF. A biochemical analysis linking APOBEC3A to disparate HIV-1 restriction and skin cancer. The Journal of Biological Chemistry. 288: 29294-304. PMID 23979356 DOI: 10.1074/jbc.M113.504175  0.8
2013 Johnatty SE, Beesley J, Gao B, Chen X, Lu Y, Law MH, Henderson MJ, Russell AJ, Hedditch EL, Emmanuel C, Fereday S, Webb PM, Goode EL, Vierkant RA, ... ... Goodman MT, et al. ABCB1 (MDR1) polymorphisms and ovarian cancer progression and survival: a comprehensive analysis from the Ovarian Cancer Association Consortium and The Cancer Genome Atlas. Gynecologic Oncology. 131: 8-14. PMID 23917080 DOI: 10.1016/j.ygyno.2013.07.107  0.44
2013 Pomerantz RT, Goodman MF, O'Donnell ME. DNA polymerases are error-prone at RecA-mediated recombination intermediates. Cell Cycle (Georgetown, Tex.). 12: 2558-63. PMID 23907132 DOI: 10.4161/cc.25691  1
2013 Goodman MF, Woodgate R. Translesion DNA polymerases. Cold Spring Harbor Perspectives in Biology. 5: a010363. PMID 23838442 DOI: 10.1101/cshperspect.a010363  1
2013 Pomerantz RT, Kurth I, Goodman MF, O'Donnell ME. Preferential D-loop extension by a translesion DNA polymerase underlies error-prone recombination. Nature Structural & Molecular Biology. 20: 748-55. PMID 23686288 DOI: 10.1038/nsmb.2573  1
2013 Singh SK, Maeda K, Eid MM, Almofty SA, Ono M, Pham P, Goodman MF, Sakaguchi N. GANP regulates recruitment of AID to immunoglobulin variable regions by modulating transcription and nucleosome occupancy. Nature Communications. 4: 1830. PMID 23652018 DOI: 10.1038/ncomms2823  0.8
2013 Corzett CH, Goodman MF, Finkel SE. Competitive fitness during feast and famine: how SOS DNA polymerases influence physiology and evolution in Escherichia coli. Genetics. 194: 409-20. PMID 23589461 DOI: 10.1534/genetics.113.151837  1
2013 Indiani C, Patel M, Goodman MF, O'Donnell ME. RecA acts as a switch to regulate polymerase occupancy in a moving replication fork. Proceedings of the National Academy of Sciences of the United States of America. 110: 5410-5. PMID 23509251 DOI: 10.1073/pnas.1303301110  1
2013 Jaszczur M, Bertram JG, Pham P, Scharff MD, Goodman MF. AID and Apobec3G haphazard deamination and mutational diversity. Cellular and Molecular Life Sciences : Cmls. 70: 3089-108. PMID 23178850 DOI: 10.1007/s00018-012-1212-1  1
2012 McDonald JP, Vaisman A, Kuban W, Goodman MF, Woodgate R. Mechanisms employed by Escherichia coli to prevent ribonucleotide incorporation into genomic DNA by Pol V. Plos Genetics. 8: e1003030. PMID 23144626 DOI: 10.1371/journal.pgen.1003030  0.76
2012 Oertell K, Wu Y, Zakharova VM, Kashemirov BA, Shock DD, Beard WA, Wilson SH, McKenna CE, Goodman MF. Effect of β,γ-CHF- and β,γ-CHCl-dGTP halogen atom stereochemistry on the transition state of DNA polymerase β. Biochemistry. 51: 8491-501. PMID 23043620 DOI: 10.1021/bi3010335  1
2012 Klvaňa M, Murphy DL, Jeřábek P, Goodman MF, Warshel A, Sweasy JB, Florián J. Catalytic effects of mutations of distant protein residues in human DNA polymerase β: theory and experiment. Biochemistry. 51: 8829-43. PMID 23013478 DOI: 10.1021/bi300783t  1
2012 Goodman MF. An accidental biochemist. Dna Repair. 11: 527-36. PMID 22808529  1
2012 Lu Y, Chen X, Beesley J, Johnatty SE, Defazio A, Lambrechts S, Lambrechts D, Despierre E, Vergotes I, Chang-Claude J, Hein R, Nickels S, Wang-Gohrke S, Dörk T, ... ... Goodman MT, et al. Genome-wide association study for ovarian cancer susceptibility using pooled DNA. Twin Research and Human Genetics : the Official Journal of the International Society For Twin Studies. 15: 615-23. PMID 22794196 DOI: 10.1017/thg.2012.38  0.44
2012 Kuban W, Vaisman A, McDonald JP, Karata K, Yang W, Goodman MF, Woodgate R. Escherichia coli UmuC active site mutants: effects on translesion DNA synthesis, mutagenesis and cell survival. Dna Repair. 11: 726-32. PMID 22784977 DOI: 10.1016/j.dnarep.2012.06.005  1
2012 Mu Y, Prochnow C, Pham P, Chen XS, Goodman MF. A structural basis for the biochemical behavior of activation-induced deoxycytidine deaminase class-switch recombination-defective hyper-IgM-2 mutants. The Journal of Biological Chemistry. 287: 28007-16. PMID 22715099 DOI: 10.1074/jbc.M112.370189  1
2012 Vaisman A, Kuban W, McDonald JP, Karata K, Yang W, Goodman MF, Woodgate R. Critical amino acids in Escherichia coli UmuC responsible for sugar discrimination and base-substitution fidelity. Nucleic Acids Research. 40: 6144-57. PMID 22422840 DOI: 10.1093/nar/gks233  1
2012 Wu Y, Zakharova VM, Kashemirov BA, Goodman MF, Batra VK, Wilson SH, McKenna CE. β,γ-CHF- and β,γ-CHCl-dGTP diastereomers: synthesis, discrete 31P NMR signatures, and absolute configurations of new stereochemical probes for DNA polymerases. Journal of the American Chemical Society. 134: 8734-7. PMID 22397499 DOI: 10.1021/ja300218x  1
2012 Senavirathne G, Jaszczur M, Auerbach PA, Upton TG, Chelico L, Goodman MF, Rueda D. Single-stranded DNA scanning and deamination by APOBEC3G cytidine deaminase at single molecule resolution. The Journal of Biological Chemistry. 287: 15826-35. PMID 22362763 DOI: 10.1074/jbc.M112.342790  1
2012 Karata K, Vaisman A, Goodman MF, Woodgate R. Simple and efficient purification of Escherichia coli DNA polymerase V: cofactor requirements for optimal activity and processivity in vitro. Dna Repair. 11: 431-40. PMID 22341652 DOI: 10.1016/j.dnarep.2012.01.012  1
2012 Chamberlain BT, Batra VK, Beard WA, Kadina AP, Shock DD, Kashemirov BA, McKenna CE, Goodman MF, Wilson SH. Stereospecific formation of a ternary complex of (S)-α,β-fluoromethylene-dATP with DNA pol β. Chembiochem : a European Journal of Chemical Biology. 13: 528-30. PMID 22315190 DOI: 10.1002/cbic.201100738  1
2011 Beesley J, Pickett HA, Johnatty SE, Dunning AM, Chen X, Li J, Michailidou K, Lu Y, Rider DN, Palmieri RT, Stutz MD, Lambrechts D, Despierre E, Lambrechts S, Vergote I, ... ... Goodman MT, et al. Functional polymorphisms in the TERT promoter are associated with risk of serous epithelial ovarian and breast cancers. Plos One. 6: e24987. PMID 21949822 DOI: 10.1371/journal.pone.0024987  0.44
2011 Klvaňa M, Jeřábek P, Goodman MF, Florián J. An abridged transition state model to derive structure, dynamics, and energy components of DNA polymerase β fidelity. Biochemistry. 50: 7023-32. PMID 21739967 DOI: 10.1021/bi200790s  1
2011 Yamanaka K, Minko IG, Finkel SE, Goodman MF, Lloyd RS. Role of high-fidelity Escherichia coli DNA polymerase I in replication bypass of a deoxyadenosine DNA-peptide cross-link. Journal of Bacteriology. 193: 3815-21. PMID 21622737 DOI: 10.1128/JB.01550-10  1
2011 Pham P, Calabrese P, Park SJ, Goodman MF. Analysis of a single-stranded DNA-scanning process in which activation-induced deoxycytidine deaminase (AID) deaminates C to U haphazardly and inefficiently to ensure mutational diversity. The Journal of Biological Chemistry. 286: 24931-42. PMID 21572036 DOI: 10.1074/jbc.M111.241208  1
2011 Notaridou M, Quaye L, Dafou D, Jones C, Song H, Høgdall E, Kjaer SK, Christensen L, Høgdall C, Blaakaer J, McGuire V, Wu AH, Van Den Berg DJ, Pike MC, Gentry-Maharaj A, ... ... Goodman MT, et al. Common alleles in candidate susceptibility genes associated with risk and development of epithelial ovarian cancer. International Journal of Cancer. Journal International Du Cancer. 128: 2063-74. PMID 20635389 DOI: 10.1002/ijc.25554  0.44
2010 Goode EL, Chenevix-Trench G, Song H, Ramus SJ, Notaridou M, Lawrenson K, Widschwendter M, Vierkant RA, Larson MC, Kjaer SK, Birrer MJ, Berchuck A, Schildkraut J, Tomlinson I, Kiemeney LA, ... ... Goodman MT, et al. A genome-wide association study identifies susceptibility loci for ovarian cancer at 2q31 and 8q24. Nature Genetics. 42: 874-9. PMID 20852632 DOI: 10.1038/ng.668  0.44
2010 Surya Prakash GK, Zibinsky M, Upton TG, Kashemirov BA, McKenna CE, Oertell K, Goodman MF, Batra VK, Pedersen LC, Beard WA, Shock DD, Wilson SH, Olah GA. Synthesis and biological evaluation of fluorinated deoxynucleotide analogs based on bis-(difluoromethylene)triphosphoric acid. Proceedings of the National Academy of Sciences of the United States of America. 107: 15693-8. PMID 20724659 DOI: 10.1073/pnas.1007430107  1
2010 Johnatty SE, Beesley J, Chen X, Macgregor S, Duffy DL, Spurdle AB, deFazio A, Gava N, Webb PM, Rossing MA, Doherty JA, Goodman MT, Lurie G, Thompson PJ, Wilkens LR, et al. Evaluation of candidate stromal epithelial cross-talk genes identifies association between risk of serous ovarian cancer and TERT, a cancer susceptibility "hot-spot". Plos Genetics. 6: e1001016. PMID 20628624 DOI: 10.1371/journal.pgen.1001016  0.44
2010 Maeda K, Singh SK, Eda K, Kitabatake M, Pham P, Goodman MF, Sakaguchi N. GANP-mediated recruitment of activation-induced cytidine deaminase to cell nuclei and to immunoglobulin variable region DNA. The Journal of Biological Chemistry. 285: 23945-53. PMID 20507984 DOI: 10.1074/jbc.M110.131441  0.8
2010 Batra VK, Pedersen LC, Beard WA, Wilson SH, Kashemirov BA, Upton TG, Goodman MF, McKenna CE. Halogenated beta,gamma-methylene- and ethylidene-dGTP-DNA ternary complexes with DNA polymerase beta: structural evidence for stereospecific binding of the fluoromethylene analogues. Journal of the American Chemical Society. 132: 7617-25. PMID 20465217 DOI: 10.1021/ja909370k  1
2010 Patel M, Jiang Q, Woodgate R, Cox MM, Goodman MF. A new model for SOS-induced mutagenesis: how RecA protein activates DNA polymerase V. Critical Reviews in Biochemistry and Molecular Biology. 45: 171-84. PMID 20441441 DOI: 10.3109/10409238.2010.480968  0.76
2010 Chelico L, Prochnow C, Erie DA, Chen XS, Goodman MF. Structural model for deoxycytidine deamination mechanisms of the HIV-1 inactivation enzyme APOBEC3G. The Journal of Biological Chemistry. 285: 16195-205. PMID 20212048 DOI: 10.1074/jbc.M110.107987  1
2010 McKenna CE, Kashemirov BA, Peterson LW, Goodman MF. Modifications to the dNTP triphosphate moiety: from mechanistic probes for DNA polymerases to antiviral and anti-cancer drug design. Biochimica Et Biophysica Acta. 1804: 1223-30. PMID 20079885 DOI: 10.1016/j.bbapap.2010.01.005  1
2010 Bertram JG, Oertell K, Petruska J, Goodman MF. DNA polymerase fidelity: comparing direct competition of right and wrong dNTP substrates with steady state and pre-steady state kinetics. Biochemistry. 49: 20-8. PMID 20000359 DOI: 10.1021/bi901653g  1
2009 Madia F, Wei M, Yuan V, Hu J, Gattazzo C, Pham P, Goodman MF, Longo VD. Oncogene homologue Sch9 promotes age-dependent mutations by a superoxide and Rev1/Polzeta-dependent mechanism. The Journal of Cell Biology. 186: 509-23. PMID 19687253 DOI: 10.1083/jcb.200906011  0.8
2009 Chelico L, Pham P, Petruska J, Goodman MF. Biochemical basis of immunological and retroviral responses to DNA-targeted cytosine deamination by activation-induced cytidine deaminase and APOBEC3G. The Journal of Biological Chemistry. 284: 27761-5. PMID 19684020 DOI: 10.1074/jbc.R109.052449  1
2009 Jiang Q, Karata K, Woodgate R, Cox MM, Goodman MF. The active form of DNA polymerase V is UmuD'(2)C-RecA-ATP. Nature. 460: 359-63. PMID 19606142 DOI: 10.1038/nature08178  0.76
2009 MacCarthy T, Kalis SL, Roa S, Pham P, Goodman MF, Scharff MD, Bergman A. V-region mutation in vitro, in vivo, and in silico reveal the importance of the enzymatic properties of AID and the sequence environment. Proceedings of the National Academy of Sciences of the United States of America. 106: 8629-34. PMID 19443686 DOI: 10.1073/pnas.0903803106  1
2009 Chelico L, Pham P, Goodman MF. Mechanisms of APOBEC3G-catalyzed processive deamination of deoxycytidine on single-stranded DNA. Nature Structural & Molecular Biology. 16: 454-5; author reply . PMID 19421154 DOI: 10.1038/nsmb0509-454  1
2009 Upton TG, Kashemirov BA, McKenna CE, Goodman MF, Prakash GK, Kultyshev R, Batra VK, Shock DD, Pedersen LC, Beard WA, Wilson SH. Alpha,beta-difluoromethylene deoxynucleoside 5'-triphosphates: a convenient synthesis of useful probes for DNA polymerase beta structure and function. Organic Letters. 11: 1883-6. PMID 19351147 DOI: 10.1021/ol701755k  1
2009 Song H, Ramus SJ, Kjaer SK, DiCioccio RA, Chenevix-Trench G, Pearce CL, Hogdall E, Whittemore AS, McGuire V, Hogdall C, Blaakaer J, Wu AH, Van Den Berg DJ, Stram DO, Menon U, ... ... Goodman MT, et al. Association between invasive ovarian cancer susceptibility and 11 best candidate SNPs from breast cancer genome-wide association study. Human Molecular Genetics. 18: 2297-304. PMID 19304784 DOI: 10.1093/hmg/ddp138  0.44
2009 Indiani C, Langston LD, Yurieva O, Goodman MF, O'Donnell M. Translesion DNA polymerases remodel the replisome and alter the speed of the replicative helicase. Proceedings of the National Academy of Sciences of the United States of America. 106: 6031-8. PMID 19279203 DOI: 10.1073/pnas.0901403106  1
2009 Schildkraut JM, Goode EL, Clyde MA, Iversen ES, Moorman PG, Berchuck A, Marks JR, Lissowska J, Brinton L, Peplonska B, Cunningham JM, Vierkant RA, Rider DN, Chenevix-Trench G, Webb PM, ... ... Goodman MT, et al. Single nucleotide polymorphisms in the TP53 region and susceptibility to invasive epithelial ovarian cancer. Cancer Research. 69: 2349-57. PMID 19276375 DOI: 10.1158/0008-5472.CAN-08-2902  0.44
2009 Rausch JW, Chelico L, Goodman MF, Le Grice SF. Dissecting APOBEC3G substrate specificity by nucleoside analog interference. The Journal of Biological Chemistry. 284: 7047-58. PMID 19136562 DOI: 10.1074/jbc.M807258200  0.64
2009 Pearce CL, Near AM, Van Den Berg DJ, Ramus SJ, Gentry-Maharaj A, Menon U, Gayther SA, Anderson AR, Edlund CK, Wu AH, Chen X, Beesley J, Webb PM, Holt SK, Chen C, ... ... Goodman MT, et al. Validating genetic risk associations for ovarian cancer through the international Ovarian Cancer Association Consortium. British Journal of Cancer. 100: 412-20. PMID 19127255 DOI: 10.1038/sj.bjc.6604820  0.44
2009 Chelico L, Pham P, Goodman MF. Stochastic properties of processive cytidine DNA deaminases AID and APOBEC3G. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 364: 583-93. PMID 19022738 DOI: 10.1098/rstb.2008.0195  1
2009 Prochnow C, Bransteitter R, Goodman MF, Chen XS. The prospect of APOBEC3G for the future of HIV therapy Hiv Therapy. 3: 7-10. DOI: 10.2217/17584310.3.1.7  1
2008 Palmieri RT, Wilson MA, Iversen ES, Clyde MA, Calingaert B, Moorman PG, Poole C, Anderson AR, Anderson S, Anton-Culver H, Beesley J, Hogdall E, Brewster W, Carney ME, Chen X, ... ... Goodman MT, et al. Polymorphism in the IL18 gene and epithelial ovarian cancer in non-Hispanic white women. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 17: 3567-72. PMID 19064572 DOI: 10.1158/1055-9965.EPI-08-0548  0.44
2008 Holden LG, Prochnow C, Chang YP, Bransteitter R, Chelico L, Sen U, Stevens RC, Goodman MF, Chen XS. Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications. Nature. 456: 121-4. PMID 18849968 DOI: 10.1038/nature07357  1
2008 Minko IG, Yamanaka K, Kozekov ID, Kozekova A, Indiani C, O'Donnell ME, Jiang Q, Goodman MF, Rizzo CJ, Lloyd RS. Replication bypass of the acrolein-mediated deoxyguanine DNA-peptide cross-links by DNA polymerases of the DinB family. Chemical Research in Toxicology. 21: 1983-90. PMID 18788757 DOI: 10.1021/tx800174a  1
2008 Pham P, Zhang K, Goodman MF. Hypermutation at A/T sites during G.U mismatch repair in vitro by human B-cell lysates. The Journal of Biological Chemistry. 283: 31754-62. PMID 18786917 DOI: 10.1074/jbc.M805524200  1
2008 Kumari A, Minko IG, Harbut MB, Finkel SE, Goodman MF, Lloyd RS. Replication bypass of interstrand cross-link intermediates by Escherichia coli DNA polymerase IV. The Journal of Biological Chemistry. 283: 27433-7. PMID 18697749 DOI: 10.1074/jbc.M801237200  1
2008 Ramus SJ, Vierkant RA, Johnatty SE, Pike MC, Van Den Berg DJ, Wu AH, Pearce CL, Menon U, Gentry-Maharaj A, Gayther SA, Dicioccio RA, McGuire V, Whittemore AS, Song H, Easton DF, ... ... Goodman MT, et al. Consortium analysis of 7 candidate SNPs for ovarian cancer. International Journal of Cancer. Journal International Du Cancer. 123: 380-8. PMID 18431743 DOI: 10.1002/ijc.23448  0.44
2008 Pham P, Smolka MB, Calabrese P, Landolph A, Zhang K, Zhou H, Goodman MF. Impact of phosphorylation and phosphorylation-null mutants on the activity and deamination specificity of activation-induced cytidine deaminase. The Journal of Biological Chemistry. 283: 17428-39. PMID 18417471 DOI: 10.1074/jbc.M802121200  1
2008 Chelico L, Sacho EJ, Erie DA, Goodman MF. A model for oligomeric regulation of APOBEC3G cytosine deaminase-dependent restriction of HIV. The Journal of Biological Chemistry. 283: 13780-91. PMID 18362149 DOI: 10.1074/jbc.M801004200  1
2008 Furukohri A, Goodman MF, Maki H. A dynamic polymerase exchange with Escherichia coli DNA polymerase IV replacing DNA polymerase III on the sliding clamp. The Journal of Biological Chemistry. 283: 11260-9. PMID 18308729 DOI: 10.1074/jbc.M709689200  1
2008 Peled JU, Kuang FL, Iglesias-Ussel MD, Roa S, Kalis SL, Goodman MF, Scharff MD. The biochemistry of somatic hypermutation. Annual Review of Immunology. 26: 481-511. PMID 18304001 DOI: 10.1146/annurev.immunol.26.021607.090236  1
2008 Sucato CA, Upton TG, Kashemirov BA, Osuna J, Oertell K, Beard WA, Wilson SH, Florián J, Warshel A, McKenna CE, Goodman MF. DNA polymerase beta fidelity: halomethylene-modified leaving groups in pre-steady-state kinetic analysis reveal differences at the chemical transition state. Biochemistry. 47: 870-9. PMID 18161950 DOI: 10.1021/bi7014162  1
2008 Xiang Y, Goodman MF, Beard WA, Wilson SH, Warshel A. Exploring the role of large conformational changes in the fidelity of DNA polymerase beta. Proteins. 70: 231-47. PMID 17671961 DOI: 10.1002/prot.21668  1
2007 McKenna CE, Kashemirov BA, Upton TG, Batra VK, Goodman MF, Pedersen LC, Beard WA, Wilson SH. (R)-beta,gamma-fluoromethylene-dGTP-DNA ternary complex with DNA polymerase beta. Journal of the American Chemical Society. 129: 15412-3. PMID 18031037 DOI: 10.1021/ja072127v  1
2007 Silverman AP, Jiang Q, Goodman MF, Kool ET. Steric and electrostatic effects in DNA synthesis by the SOS-induced DNA polymerases II and IV of Escherichia coli. Biochemistry. 46: 13874-81. PMID 17988102 DOI: 10.1021/bi700851z  1
2007 Crans DC, Holder AA, Saha TK, Prakash GK, Yousufuddin M, Kultyshev R, Ismail R, Goodman MF, Borden J, Florian J. Chelation of vanadium(V) by difluoromethylene bisphosphonate, a structural analogue of pyrophosphate. Inorganic Chemistry. 46: 6723-32. PMID 17628058 DOI: 10.1021/ic062484r  1
2007 Goodman MF, Scharff MD, Romesberg FE. AID-initiated purposeful mutations in immunoglobulin genes. Advances in Immunology. 94: 127-55. PMID 17560274 DOI: 10.1016/S0065-2776(06)94005-X  1
2007 Schlacher K, Goodman MF. Lessons from 50 years of SOS DNA-damage-induced mutagenesis. Nature Reviews. Molecular Cell Biology. 8: 587-94. PMID 17551516 DOI: 10.1038/nrm2198  1
2007 Pham P, Chelico L, Goodman MF. DNA deaminases AID and APOBEC3G act processively on single-stranded DNA. Dna Repair. 6: 689-92; author reply. PMID 17291835 DOI: 10.1016/j.dnarep.2007.01.001  1
2007 Martínek V, Bren U, Goodman MF, Warshel A, Florián J. DNA polymerase beta catalytic efficiency mirrors the Asn279-dCTP H-bonding strength. Febs Letters. 581: 775-80. PMID 17286973 DOI: 10.1016/j.febslet.2007.01.042  1
2007 Sucato CA, Upton TG, Kashemirov BA, Batra VK, Martínek V, Xiang Y, Beard WA, Pedersen LC, Wilson SH, McKenna CE, Florián J, Warshel A, Goodman MF. Modifying the beta,gamma leaving-group bridging oxygen alters nucleotide incorporation efficiency, fidelity, and the catalytic mechanism of DNA polymerase beta. Biochemistry. 46: 461-71. PMID 17209556 DOI: 10.1021/bi061517b  1
2007 Prochnow C, Bransteitter R, Klein MG, Goodman MF, Chen XS. The APOBEC-2 crystal structure and functional implications for the deaminase AID. Nature. 445: 447-51. PMID 17187054 DOI: 10.1038/nature05492  1
2006 Schlacher K, Cox MM, Woodgate R, Goodman MF. RecA acts in trans to allow replication of damaged DNA by DNA polymerase V. Nature. 442: 883-7. PMID 16929290 DOI: 10.1038/nature05042  1
2006 Schlacher K, Jiang Q, Woodgate R, Goodman MF. Purification and characterization of Escherichia coli DNA polymerase V. Methods in Enzymology. 408: 378-90. PMID 16793381 DOI: 10.1016/S0076-6879(06)08023-2  1
2006 Xiang Y, Oelschlaeger P, Florián J, Goodman MF, Warshel A. Simulating the effect of DNA polymerase mutations on transition-state energetics and fidelity: evaluating amino acid group contribution and allosteric coupling for ionized residues in human pol beta. Biochemistry. 45: 7036-48. PMID 16752894 DOI: 10.1021/bi060147o  1
2006 Bransteitter R, Sneeden JL, Allen S, Pham P, Goodman MF. First AID (activation-induced cytidine deaminase) is needed to produce high affinity isotype-switched antibodies. The Journal of Biological Chemistry. 281: 16833-6. PMID 16624806 DOI: 10.1074/jbc.R600006200  1
2006 Chelico L, Pham P, Calabrese P, Goodman MF. APOBEC3G DNA deaminase acts processively 3' --> 5' on single-stranded DNA. Nature Structural & Molecular Biology. 13: 392-9. PMID 16622407 DOI: 10.1038/nsmb1086  1
2006 Kroeger KM, Kim J, Goodman MF, Greenberg MM. Replication of an oxidized abasic site in Escherichia coli by a dNTP-stabilized misalignment mechanism that reads upstream and downstream nucleotides. Biochemistry. 45: 5048-56. PMID 16605273 DOI: 10.1021/bi052276v  1
2006 Schlacher K, Pham P, Cox MM, Goodman MF. Roles of DNA polymerase V and RecA protein in SOS damage-induced mutation. Chemical Reviews. 106: 406-19. PMID 16464012 DOI: 10.1021/cr0404951  1
2005 Goodman MF, Kunkel TA. Dale Mosbaugh commemorative DNA Repair Dna Repair. 4: 1345. PMID 16257587 DOI: 10.1016/j.dnarep.2005.09.012  1
2005 Shen X, Woodgate R, Goodman MF. Lyase activities intrinsic to Escherichia coli polymerases IV and V. Dna Repair. 4: 1368-73. PMID 16202661 DOI: 10.1016/j.dnarep.2005.08.005  1
2005 Indiani C, McInerney P, Georgescu R, Goodman MF, O'Donnell M. A sliding-clamp toolbelt binds high- and low-fidelity DNA polymerases simultaneously. Molecular Cell. 19: 805-15. PMID 16168375 DOI: 10.1016/j.molcel.2005.08.011  1
2005 Duquette ML, Pham P, Goodman MF, Maizels N. AID binds to transcription-induced structures in c-MYC that map to regions associated with translocation and hypermutation. Oncogene. 24: 5791-8. PMID 15940261 DOI: 10.1038/sj.onc.1208746  1
2005 Florián J, Goodman MF, Warshel A. Computer simulations of protein functions: searching for the molecular origin of the replication fidelity of DNA polymerases. Proceedings of the National Academy of Sciences of the United States of America. 102: 6819-24. PMID 15863620 DOI: 10.1073/pnas.0408173102  1
2005 Pham P, Bransteitter R, Goodman MF. Reward versus risk: DNA cytidine deaminases triggering immunity and disease. Biochemistry. 44: 2703-15. PMID 15723516 DOI: 10.1021/bi047481+  1
2005 Schlacher K, Leslie K, Wyman C, Woodgate R, Cox MM, Goodman MF. DNA polymerase V and RecA protein, a minimal mutasome. Molecular Cell. 17: 561-72. PMID 15721259 DOI: 10.1016/j.molcel.2005.01.006  1
2005 Goodman MF, Scharff MD. Identifying protein-protein interactions in somatic hypermutation. The Journal of Experimental Medicine. 201: 493-6. PMID 15710655 DOI: 10.1084/jem.20050161  1
2005 Larijani M, Frieder D, Sonbuchner TM, Bransteitter R, Goodman MF, Bouhassira EE, Scharff MD, Martin A. Methylation protects cytidines from AID-mediated deamination. Molecular Immunology. 42: 599-604. PMID 15607819 DOI: 10.1016/j.molimm.2004.09.007  1
2004 Tippin B, Pham P, Bransteitter R, Goodman MF. Somatic hypermutation: a mutational panacea. Advances in Protein Chemistry. 69: 307-35. PMID 15588848 DOI: 10.1016/S0065-3233(04)69011-5  1
2004 Kroeger KM, Kim J, Goodman MF, Greenberg MM. Effects of the C4'-oxidized abasic site on replication in Escherichia coli. An unusually large deletion is induced by a small lesion. Biochemistry. 43: 13621-7. PMID 15504024 DOI: 10.1021/bi048337r  1
2004 Kroeger KM, Goodman MF, Greenberg MM. A comprehensive comparison of DNA replication past 2-deoxyribose and its tetrahydrofuran analog in Escherichia coli. Nucleic Acids Research. 32: 5480-5. PMID 15477395 DOI: 10.1093/nar/gkh873  1
2004 Bransteitter R, Pham P, Calabrese P, Goodman MF. Biochemical analysis of hypermutational targeting by wild type and mutant activation-induced cytidine deaminase. The Journal of Biological Chemistry. 279: 51612-21. PMID 15371439 DOI: 10.1074/jbc.M408135200  1
2004 Tippin B, Kobayashi S, Bertram JG, Goodman MF. To slip or skip, visualizing frameshift mutation dynamics for error-prone DNA polymerases. The Journal of Biological Chemistry. 279: 45360-8. PMID 15339923 DOI: 10.1074/jbc.M408600200  1
2004 Bertram JG, Bloom LB, O'Donnell M, Goodman MF. Increased dNTP binding affinity reveals a nonprocessive role for Escherichia coli beta clamp with DNA polymerase IV. The Journal of Biological Chemistry. 279: 33047-50. PMID 15210708 DOI: 10.1074/jbc.C400265200  1
2004 Tippin B, Pham P, Goodman MF. Error-prone replication for better or worse. Trends in Microbiology. 12: 288-95. PMID 15165607 DOI: 10.1016/j.tim.2004.04.004  1
2004 Kroeger KM, Jiang YL, Kow YW, Goodman MF, Greenberg MM. Mutagenic effects of 2-deoxyribonolactone in Escherichia coli. An abasic lesion that disobeys the A-rule. Biochemistry. 43: 6723-33. PMID 15157106 DOI: 10.1021/bi049813g  1
2004 Quach N, Goodman MF, Shibata D. In vitro mutation artifacts after formalin fixation and error prone translesion synthesis during PCR. Bmc Clinical Pathology. 4: 1. PMID 15028125 DOI: 10.1186/1472-6890-4-1  1
2004 Greenberg MM, Weledji YN, Kroeger KM, Kim J, Goodman MF. In vitro effects of a C4'-oxidized abasic site on DNA polymerases. Biochemistry. 43: 2656-63. PMID 14992603 DOI: 10.1021/bi036028f  1
2003 López de Saro FJ, Georgescu RE, Goodman MF, O'Donnell M. Competitive processivity-clamp usage by DNA polymerases during DNA replication and repair. The Embo Journal. 22: 6408-18. PMID 14633999 DOI: 10.1093/emboj/cdg603  1
2003 Shen X, Woodgate R, Goodman MF. Escherichia coli DNA polymerase V subunit exchange: a post-SOS mechanism to curtail error-prone DNA synthesis. The Journal of Biological Chemistry. 278: 52546-50. PMID 14573598 DOI: 10.1074/jbc.M310127200  1
2003 Bruck I, Goodman MF, O'Donnell M. The essential C family DnaE polymerase is error-prone and efficient at lesion bypass. The Journal of Biological Chemistry. 278: 44361-8. PMID 12949067 DOI: 10.1074/jbc.M308307200  1
2003 Florián J, Goodman MF, Warshel A. Computer simulation of the chemical catalysis of DNA polymerases: discriminating between alternative nucleotide insertion mechanisms for T7 DNA polymerase. Journal of the American Chemical Society. 125: 8163-77. PMID 12837086 DOI: 10.1021/ja028997o  1
2003 Pham P, Bransteitter R, Petruska J, Goodman MF. Processive AID-catalysed cytosine deamination on single-stranded DNA simulates somatic hypermutation. Nature. 424: 103-7. PMID 12819663 DOI: 10.1038/nature01760  1
2003 Bransteitter R, Pham P, Scharff MD, Goodman MF. Activation-induced cytidine deaminase deaminates deoxycytidine on single-stranded DNA but requires the action of RNase. Proceedings of the National Academy of Sciences of the United States of America. 100: 4102-7. PMID 12651944 DOI: 10.1073/pnas.0730835100  1
2003 Florián J, Goodman MF, Warshel A. Computer simulation studies of the fidelity of DNA polymerases. Biopolymers. 68: 286-99. PMID 12601790 DOI: 10.1002/bip.10244  1
2003 Ason B, Handayani R, Williams CR, Bertram JG, Hingorani MM, O'Donnell M, Goodman MF, Bloom LB. Mechanism of loading the Escherichia coli DNA polymerase III beta sliding clamp on DNA. Bona fide primer/templates preferentially trigger the gamma complex to hydrolyze ATP and load the clamp. The Journal of Biological Chemistry. 278: 10033-40. PMID 12519754 DOI: 10.1074/jbc.M211741200  1
2002 Hartenstine MJ, Goodman MF, Petruska J. Weak strand displacement activity enables human DNA polymerase beta to expand CAG/CTG triplet repeats at strand breaks. The Journal of Biological Chemistry. 277: 41379-89. PMID 12196536 DOI: 10.1074/jbc.M207013200  1
2002 Pham P, Seitz EM, Saveliev S, Shen X, Woodgate R, Cox MM, Goodman MF. Two distinct modes of RecA action are required for DNA polymerase V-catalyzed translesion synthesis. Proceedings of the National Academy of Sciences of the United States of America. 99: 11061-6. PMID 12177433 DOI: 10.1073/pnas.172197099  0.8
2002 Kobayashi S, Valentine MR, Pham P, O'Donnell M, Goodman MF. Fidelity of Escherichia coli DNA polymerase IV. Preferential generation of small deletion mutations by dNTP-stabilized misalignment. The Journal of Biological Chemistry. 277: 34198-207. PMID 12097328 DOI: 10.1074/jbc.M204826200  1
2002 Yeiser B, Pepper ED, Goodman MF, Finkel SE. SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness. Proceedings of the National Academy of Sciences of the United States of America. 99: 8737-41. PMID 12060704 DOI: 10.1073/pnas.092269199  1
2002 Goodman MF. Error-prone repair DNA polymerases in prokaryotes and eukaryotes. Annual Review of Biochemistry. 71: 17-50. PMID 12045089 DOI: 10.1146/annurev.biochem.71.083101.124707  1
2002 Rangarajan S, Woodgate R, Goodman MF. Replication restart in UV-irradiated Escherichia coli involving pols II, III, V, PriA, RecA and RecFOR proteins. Molecular Microbiology. 43: 617-28. PMID 11929519 DOI: 10.1046/j.1365-2958.2002.02747.x  1
2002 Shen X, Sayer JM, Kroth H, Ponten I, O'Donnell M, Woodgate R, Jerina DM, Goodman MF. Efficiency and accuracy of SOS-induced DNA polymerases replicating benzo[a]pyrene-7,8-diol 9,10-epoxide A and G adducts. The Journal of Biological Chemistry. 277: 5265-74. PMID 11734560 DOI: 10.1074/jbc.M109575200  0.76
2002 Wang Z, Lazarov E, O'Donnell M, Goodman MF. Resolving a fidelity paradox: why Escherichia coli DNA polymerase II makes more base substitution errors in AT- compared with GC-rich DNA. The Journal of Biological Chemistry. 277: 4446-54. PMID 11733526 DOI: 10.1074/jbc.M110006200  1
2002 Florián J, Warshel A, Goodman MF. Molecular dynamics free-energy simulations of the binding contribution to the fidelity of T7 DNA polymerase Journal of Physical Chemistry B. 106: 5754-5760. DOI: 10.1021/jp020791m  1
2002 Florián J, Goodman MF, Warshel A. Theoretical investigation of the binding free energies and key substrate-recognition components of the replication fidelity of human DNA polymerase β Journal of Physical Chemistry B. 106: 5739-5753. DOI: 10.1021/jp020790u  1
2001 Silvian LF, Toth EA, Pham P, Goodman MF, Ellenberger T. Crystal structure of a DinB family error-prone DNA polymerase from Sulfolobus solfataricus Nature Structural Biology. 8: 984-989. PMID 11685247 DOI: 10.1038/nsb1101-984  1
2001 Bloom LB, Goodman MF. A sliding clamp monkey wrench. Nature Structural Biology. 8: 829-31. PMID 11573082 DOI: 10.1038/nsb1001-829  1
2001 Ohmori H, Friedberg EC, Fuchs RP, Goodman MF, Hanaoka F, Hinkle D, Kunkel TA, Lawrence CW, Livneh Z, Nohmi T, Prakash L, Prakash S, Todo T, Walker GC, Wang Z, et al. The Y-family of DNA polymerases. Molecular Cell. 8: 7-8. PMID 11515498 DOI: 10.1016/S1097-2765(01)00278-7  1
2001 Pham P, Rangarajan S, Woodgate R, Goodman MF. Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 98: 8350-8354. PMID 11459974 DOI: 10.1073/pnas.111007198  1
2001 Poltoratsky V, Woo CJ, Tippin B, Martin A, Goodman MF, Scharff MD. Expression of error-prone polymerases in BL2 cells activated for Ig somatic hypermutation. Proceedings of the National Academy of Sciences of the United States of America. 98: 7976-81. PMID 11427727 DOI: 10.1073/pnas.141222198  1
2001 Tippin B, Goodman MF. A new class of errant DNA polymerases provides candidates for somatic hypermutation Philosophical Transactions of the Royal Society B: Biological Sciences. 355: 47-51. PMID 11205329 DOI: 10.1098/rstb.2000.0747  1
2001 Pham P, Bertram JG, O'Donnell M, Woodgate R, Goodman MF. A model for SOS-lesion-targeted mutations in Escherichia coli. Nature. 409: 366-70. PMID 11201748 DOI: 10.1038/35053116  0.48
2000 Goodman MF, Woodgate R. The biochemical basis and in vivo regulation of SOS-induced mutagenesis promoted by Escherichia coli DNA polymerase V (UmuD′2C) Cold Spring Harbor Symposia On Quantitative Biology. 65: 31-40. PMID 12760018 DOI: 10.1101/sqb.2000.65.31  1
2000 Goodman MF, Tippin B. The expanding polymerase universe Nature Reviews Molecular Cell Biology. 1: 101-109. PMID 11253362 DOI: 10.1038/35040051  1
2000 Poltoratsky V, Goodman MF, Scharff MD. Error-prone candidates vie for somatic mutation. The Journal of Experimental Medicine. 192: F27-30. PMID 11085756  1
2000 Bertram JG, Bloom LB, Hingorani MM, Beechem JM, O'Donnell M, Goodman MF. Molecular mechanism and energetics of clamp assembly in Escherichia coli. The role of ATP hydrolysis when gamma complex loads beta on DNA. The Journal of Biological Chemistry. 275: 28413-20. PMID 10874049 DOI: 10.1074/jbc.M910441199  1
2000 Hartenstine MJ, Goodman MF, Petruska J. Base stacking and even/odd behavior of hairpin loops in DNA triplet repeat slippage and expansion with DNA polymerase. The Journal of Biological Chemistry. 275: 18382-90. PMID 10849445 DOI: 10.1074/jbc.275.24.18382  1
2000 Tang M, Pham P, Shen X, Taylor JS, O'Donnell M, Woodgate R, Goodman MF. Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis. Nature. 404: 1014-8. PMID 10801133 DOI: 10.1038/35010020  0.8
2000 Goodman MF. Coping with replication 'train wrecks' in Escherichia coli using Pol V, Pol II and RecA proteins Trends in Biochemical Sciences. 25: 189-195. PMID 10754553 DOI: 10.1016/S0968-0004(00)01564-4  1
2000 Goodman MF, Tippin B. Sloppier copier DNA polymerases involved in genome repair Current Opinion in Genetics and Development. 10: 162-168. PMID 10753775 DOI: 10.1016/S0959-437X(00)00057-5  1
2000 Chen X, Zuo S, Kelman Z, O'Donnell M, Hurwitz J, Goodman MF. Fidelity of eucaryotic DNA polymerase δ holoenzyme from Schizosaccharomyces pombe Journal of Biological Chemistry. 275: 17677-17682. PMID 10748208 DOI: 10.1074/jbc.M910278199  1
2000 Cox MM, Goodman MF, Kreuzer KN, Sherratt DJ, Sandler SJ, Marians KJ. The importance of repairing stalled replication forks Nature. 404: 37-41. PMID 10716434 DOI: 10.1038/35003501  1
2000 Ason B, Bertram JG, Hingorani MM, Beechem JM, O'Donnell M, Goodman MF, Bloom LB. A model for Escherichia coli DNA polymerase III holoenzyme assembly at primer/template ends. DNA triggers a change in binding specificity of the gamma complex clamp loader. The Journal of Biological Chemistry. 275: 3006-15. PMID 10644772 DOI: 10.1074/jbc.275.4.3006  1
1999 Zerbe LK, Goodman MF, Efrati E, Kuchta RD. Abasic template lesions are strong chain terminators for DNA primase but not for DNA polymerase α during the synthesis of new DNA strands Biochemistry. 38: 12908-12914. PMID 10504262 DOI: 10.1021/bi991075m  1
1999 Hingorani MM, Bloom LB, Goodman MF, O'Donnell M. Division of labor--sequential ATP hydrolysis drives assembly of a DNA polymerase sliding clamp around DNA. The Embo Journal. 18: 5131-44. PMID 10487764 DOI: 10.1093/emboj/18.18.5131  1
1999 Rangarajan S, Woodgate R, Goodman MF. A phenotype for enigmatic DNA polymerase II: A pivotal role for pol II in replication restart in UV-irradiated Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 96: 9224-9229. PMID 10430924 DOI: 10.1073/pnas.96.16.9224  1
1999 Tang M, Shen X, Frank EG, O'Donnell M, Woodgate R, Goodman MF. UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V. Proceedings of the National Academy of Sciences of the United States of America. 96: 8919-24. PMID 10430871  0.76
1999 Goodman MF. On the wagon - DNA polymerase joins 'H-bonds anonymous' Nature Biotechnology. 17: 640-641. PMID 10409353 DOI: 10.1038/10852  1
1998 Roweis S, Winfree E, Burgoyne R, Chelyapov NV, Goodman MF, Rothemund PW, Adleman LM. A sticker-based model for DNA computation. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 5: 615-29. PMID 10072080 DOI: 10.1089/cmb.1998.5.615  1
1998 Rehrauer WM, Bruck I, Woodgate R, Goodman MF, Kowalczykowski SC. Modulation of RecA nucleoprotein function by the mutagenic UmuD'C protein complex. The Journal of Biological Chemistry. 273: 32384-7. PMID 9829966  0.76
1998 Goodman MF. Mutagenesis: Purposeful mutations Nature. 395: 221-223. PMID 9751042 DOI: 10.1038/26111  1
1998 Bertram JG, Bloom LB, Turner J, O'Donnell M, Beechem JM, Goodman MF. Pre-steady state analysis of the assembly of wild type and mutant circular clamps of Escherichia coli DNA polymerase III onto DNA. The Journal of Biological Chemistry. 273: 24564-74. PMID 9733751 DOI: 10.1074/jbc.273.38.24564  1
1998 Reha-Krantz LJ, Marquez LA, Elisseeva E, Baker RP, Bloom LB, Dunford HB, Goodman MF. The proofreading pathway of bacteriophage T4 DNA polymerase. The Journal of Biological Chemistry. 273: 22969-76. PMID 9722519 DOI: 10.1074/jbc.273.36.22969  1
1998 Tang M, Bruck I, Eritja R, Turner J, Frank EG, Woodgate R, O'Donnell M, Goodman MF. Biochemical basis of SOS-induced mutagenesis in Escherichia coli: reconstitution of in vitro lesion bypass dependent on the UmuD'2C mutagenic complex and RecA protein. Proceedings of the National Academy of Sciences of the United States of America. 95: 9755-60. PMID 9707548  0.76
1998 Otto MR, Bloom LB, Goodman MF, Beechem JM. Stopped-flow fluorescence study of precatalytic primer strand base-unstacking transitions in the exonuclease cleft of bacteriophage T4 DNA polymerase. Biochemistry. 37: 10156-63. PMID 9665721 DOI: 10.1021/bi9800754  1
1998 Beechem JM, Otto MR, Bloom LB, Eritja R, Reha-Krantz LJ, Goodman MF. Exonuclease-polymerase active site partitioning of primer-template DNA strands and equilibrium Mg2+ binding properties of bacteriophage T4 DNA polymerase. Biochemistry. 37: 10144-55. PMID 9665720 DOI: 10.1021/bi980074b  1
1998 Bhui-Kaur A, Goodman MF, Tower J. DNA mismatch repair catalyzed by extracts of mitotic, postmitotic, and senescent Drosophila tissues and involvement of mei-9 gene function for full activity Molecular and Cellular Biology. 18: 1436-1443. PMID 9488459 DOI: 10.1128/MCB.18.3.1436  1
1998 Petruska J, Hartenstine MJ, Goodman MF. Analysis of strand slippage in DNA polymerase expansions of CAG/CTG triplet repeats associated with neurodegenerative disease. The Journal of Biological Chemistry. 273: 5204-10. PMID 9478975 DOI: 10.1074/jbc.273.9.5204  1
1997 Goodman MF. Hydrogen bonding revisited: Geometric selection as a principal determinant of DNA replication fidelity Proceedings of the National Academy of Sciences of the United States of America. 94: 10493-10495. PMID 9380666 DOI: 10.1073/pnas.94.20.10493  1
1997 Fygenson DK, Goodman MF. Gel kinetic analysis of polymerase fidelity in the presence of multiple enzyme DNA encounters Journal of Biological Chemistry. 272: 27931-27935. PMID 9346942 DOI: 10.1074/jbc.272.44.27931  1
1997 Bloom LB, Chen X, Fygenson DK, Turner J, O'Donnell M, Goodman MF. Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of beta, gamma complex processivity proteins and epsilon proofreading exonuclease on nucleotide misincorporation efficiencies. The Journal of Biological Chemistry. 272: 27919-30. PMID 9346941 DOI: 10.1074/jbc.272.44.27919  1
1997 Qiu Z, Goodman MF. The Escherichia coli polB locus is identical to dinA, the structural gene for DNA polymerase II: Characterization of pol II purified from A polB mutant Journal of Biological Chemistry. 272: 8611-8617. PMID 9079692 DOI: 10.1074/jbc.272.13.8611  1
1997 Rangarajan S, Gudmundsson G, Qiu Z, Foster PL, Goodman MF. Escherichia coli DNA polymerase II catalyzes chromosomal and episomal DNA synthesis in vivo. Proceedings of the National Academy of Sciences of the United States of America. 94: 946-51. PMID 9023362 DOI: 10.1073/pnas.94.3.946  1
1996 Bloom LB, Turner J, Kelman Z, Beechem JM, O'Donnell M, Goodman MF. Dynamics of loading the beta sliding clamp of DNA polymerase III onto DNA. The Journal of Biological Chemistry. 271: 30699-708. PMID 8940047 DOI: 10.1074/jbc.271.48.30699  1
1996 Goodman M, Chen XH, Darwish D. Are U.S. lower normal B12 limits too low? Journal of the American Geriatrics Society. 44: 1274-5. PMID 8856015  0.68
1996 Sibghat-Ullah, Gallinari P, Xu YZ, Goodman MF, Bloom LB, Jiricny J, Day RS. Base analog and neighboring base effects on substrate specificity of recombinant human G:T mismatch-specific thymine DNA-glycosylase. Biochemistry. 35: 12926-32. PMID 8841138 DOI: 10.1021/bi961022u  1
1996 Law SM, Eritja R, Goodman MF, Breslauer KJ. Spectroscopic and calorimetric characterizations of DNA duplexes containing 2-aminopurine. Biochemistry. 35: 12329-37. PMID 8823167 DOI: 10.1021/bi9614545  1
1996 Fagan PA, Fàbrega C, Eritja R, Goodman MF, Wemmer DE. NMR study of the conformation of the 2-aminopurine:cytosine mismatch in DNA. Biochemistry. 35: 4026-33. PMID 8672436 DOI: 10.1021/bi952657g  1
1996 Petruska J, Arnheim N, Goodman MF. Stability of intrastrand hairpin structures formed by the CAG/CTG class of DNA triplet repeats associated with neurological diseases Nucleic Acids Research. 24: 1992-1998. PMID 8668527 DOI: 10.1093/nar/24.11.1992  1
1996 Bruck I, Woodgate R, McEuntee K, Goodman MF. Purification of a soluble UmuD'C complex from Escherichia coli: Cooperative binding of UmuD'C to single-stranded DNA Journal of Biological Chemistry. 271: 10767-10774. PMID 8631887 DOI: 10.1074/jbc.271.18.10767  1
1995 Huang MM, Erlich HA, Goodman MF, Arnheim N. Analysis of mutational changes at the HLA locus in single human sperm Human Mutation. 6: 303-310. PMID 8680404 DOI: 10.1002/humu.1380060404  1
1995 Creighton S, Bloom LB, Goodman MF. Gel fidelity assay measuring nucleotide misinsertion, exonucleolytic proofreading, and lesion bypass efficiencies. Methods in Enzymology. 262: 232-56. PMID 8594351 DOI: 10.1016/0076-6879(95)62021-4  1
1995 Cai H, Yu H, McEntee K, Goodman MF. Purification and properties of DNA polymerase II from Escherichia coli Methods in Enzymology. 262: 13-21. PMID 8594343 DOI: 10.1016/0076-6879(95)62004-4  1
1995 Creighton S, Goodman MF. Gel kinetic analysis of DNA polymerase fidelity in the presence of proofreading using bacteriophage T4 DNA polymerase Journal of Biological Chemistry. 270: 4759-4774. PMID 7876249 DOI: 10.1074/jbc.270.9.4759  1
1995 Petruska J, Goodman MF. Enthalpy-entropy compensation in DNA melting thermodynamics Journal of Biological Chemistry. 270: 746-750. PMID 7822305 DOI: 10.1074/jbc.270.2.746  1
1995 Foster PL, Gudmundsson G, Trimarchi JM, Cai H, Goodman MF. Proofreading-defective DNA polymerase II increases adaptive mutation in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 92: 7951-5. PMID 7644519 DOI: 10.1073/pnas.92.17.7951  1
1995 Goodman MF. Mutations caught in the act Nature. 378: 237-238. PMID 7477337 DOI: 10.1038/378237a0  1
1995 Fothergill M, Goodman MF, Petruska J, Warshel A. Structure-energy analysis of the role of metal ions in phosphodiester bond hydrolysis by DNA polymerase I Journal of the American Chemical Society. 117: X-11623.  1
1994 Goodman MF, Cai H, Bloom LB, Eritja R. Nucleotide insertion and primer extension at abasic template sites in different sequence contexts. Annals of the New York Academy of Sciences. 726: 132-42; discussion 1. PMID 8092671 DOI: 10.1111/j.1749-6632.1994.tb52804.x  1
1994 Escarceller M, Hicks J, Gudmundsson G, Trump G, Touati D, Lovett S, Foster PL, McEntee K, Goodman MF. Involvement of Escherichia coli DNA polymerase II in response to oxidative damage and adaptive mutation. Journal of Bacteriology. 176: 6221-8. PMID 7928992 DOI: 10.1128/jb.176.20.6221-6228.1994  1
1994 Cano A, Eritja R, Goodman MF. Synthesis of oligodeoxyribonucleotides containing 2,6-diaminopurine Nucleosides and Nucleotides. 13: 501-509. DOI: 10.1080/15257779408013258  1
1993 Goodman MF, Creighton S, Bloom LB, Petruska J, Kunkel TA. Biochemical basis of DNA replication fidelity Critical Reviews in Biochemistry and Molecular Biology. 28: 83-126. PMID 8485987 DOI: 10.3109/10409239309086792  1
1993 Bloom LB, Otto MR, Beechem JM, Goodman MF. Influence of 5'-nearest neighbors on the insertion kinetics of the fluorescent nucleotide analog 2-aminopurine by Klenow fragment. Biochemistry. 32: 11247-58. PMID 8218190 DOI: 10.1021/bi00092a039  1
1992 Rajagopalan M, Lu C, Woodgate R, O'Donnell M, Goodman MF, Echols H. Activity of the purified mutagenesis proteins UmuC, UmuD', and RecA in replicative bypass of an abasic DNA lesion by DNA polymerase III. Proceedings of the National Academy of Sciences of the United States of America. 89: 10777-81. PMID 1438275 DOI: 10.1073/pnas.89.22.10777  0.76
1992 Huang Mm, Arnheim N, Goodman MF. Extension of base mispairs by Taq DNA polymerase: Implications for single nucleotide discrimination in PCR Nucleic Acids Research. 20: 4567-4573. PMID 1408758 DOI: 10.1093/nar/20.17.4567  1
1992 Shen Jc, Creighton S, Jones PA, Goodman MF. A comparison of the fidelity of copying 5-methylcytosine and cytosine at a difined DNA template site Nucleic Acids Research. 20: 5119-5125. PMID 1383939 DOI: 10.1093/nar/20.19.5119  1
1991 Echols H, Goodman MF. Fidelity mechanisms in DNA replication. Annual Review of Biochemistry. 60: 477-511. PMID 1883202 DOI: 10.1146/annurev.bi.60.070191.002401  0.32
1990 Bonner CA, Hays S, McEntee K, Goodman MF. DNA polymerase II is encoded by the DNA damage-inducible dinA gene of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 87: 7663-7. PMID 2217198 DOI: 10.1073/pnas.87.19.7663  1
1990 Echols H, Goodman MF. Mutation induced by DNA damage: a many protein affair Mutation Research-Dna Repair. 236: 301-311. PMID 2169028 DOI: 10.1016/0921-8777(90)90013-U  1
1989 Singer B, Chavez F, Goodman MF, Essigmann JM, Dosanjh MK. Effect of 3' flanking neighbors on kinetics of pairing of dCTP or dTTP opposite O6-methylguanine in a defined primed oligonucleotide when Escherichia coli DNA polymerase I is used Proceedings of the National Academy of Sciences of the United States of America. 86: 8271-8274. PMID 2682644  1
1989 Sowers LC, Eritja R, Chen FM, Khwaja T, Kaplan BE, Goodman MF, Fazakerley GV. Characterization of the high pH wobble structure of the 2-aminopurine.cytosine mismatch by N-15 NMR spectroscopy. Biochemical and Biophysical Research Communications. 165: 89-92. PMID 2590245 DOI: 10.1016/0006-291X(89)91037-1  1
1989 Cuniasse P, Sowers LC, Eritja R, Kaplan B, Goodman MF, Cognet JAH, Le Bret M, Guschlbauer W, Fazakerley GV. Abasic frameshift in DNA. Solution conformation determined by proton NMR and molecular mechanics calculations Biochemistry. 28: 2018-2026. PMID 2541770 DOI: 10.1021/bi00431a009  1
1989 Sowers LC, Goodman MF, Eritja R, Kaplan B, Fazakerley GV. Ionized and wobble base-pairing for bromouracil-guanine in equilibrium under physiological conditions. A nuclear magnetic resonance study on an oligonucleotide containing a bromouracil-guanine base-pair as a function of pH Journal of Molecular Biology. 205: 437-447. PMID 2538629 DOI: 10.1016/0022-2836(89)90353-7  1
1989 Sowers LC, Mhaskar DN, Khwaja TA, Goodman MF. Preparation of Imino and Amino N-15 Enriched 2-Aminopurine Deoxynucleoside Nucleosides and Nucleotides. 8: 23-34. DOI: 10.1080/07328318908054155  1
1988 Petruska J, Goodman MF, Boosalis MS, Sowers LC, Cheong C, Tinoco I. Comparison between DNA melting thermodynamics and DNA polymerase fidelity Proceedings of the National Academy of Sciences of the United States of America. 85: 6252-6256. PMID 3413095 DOI: 10.1073/pnas.85.17.6252  1
1988 Goodman MF. DNA replication fidelity: kinetics and thermodynamics Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 200: 11-20. PMID 3393157 DOI: 10.1016/0027-5107(88)90067-X  1
1988 Sloane DL, Goodman MF, Echols H. The fidelity of base selection by the polymerase subunit of DNA polymerase III holoenzyme Nucleic Acids Research. 16: 6465-6475. PMID 3041378 DOI: 10.1093/nar/16.14.6465  1
1987 Fazakerley GV, Sowers LC, Eritja R, Kaplan BE, Goodman MF. NMR studies on an oligodeoxynucleotide containing 2-aminopurine opposite adenine. Biochemistry. 26: 5641-6. PMID 3676273 DOI: 10.1021/bi00392a009  1
1987 Cuniasse P, Sowers LC, Eritja R, Kaplan B, Goodman MF, Cognet JAH, Lebret M, Guschlbauer W, Fazakerley GV. An abasic site in DNA. Solution conformation determined by proton NMR and molecular mechanics calculations Nucleic Acids Research. 15: 8003-8022. PMID 3671070 DOI: 10.1093/nar/15.19.8003  1
1987 Fazakerley GV, Sowers LC, Eritja R, Kaplan BE, Goodman MF. Structural and dynamic properties of a bromouracil-adenine base pair in DNA studied by proton NMR. Journal of Biomolecular Structure & Dynamics. 5: 639-50. PMID 3271487 DOI: 10.1080/07391102.1987.10506417  1
1987 Hardy TA, Baker DJ, Newman EM, Sowers LC, Goodman MF, Smith SS. Size of the directing moiety at carbon 5 of cytosine and the activity of human DNA(cytosine-5)methyltransferase Biochemical and Biophysical Research Communications. 145: 146-152. PMID 3036116 DOI: 10.1016/0006-291X(87)91299-X  1
1987 Eritja R, Walker PA, Kaplan BE, Randall SK, Goodman MF. Synthesis of oligonucleotides containing the abasic site model compound 1, 4-anhydro-2-deoxy-d-ribitol Nucleosides and Nucleotides. 6: 803-814. DOI: 10.1080/15257778708073426  1
1986 Sowers LC, Victor Fazakerley G, Kim H, Dalton L, Goodman MF. Variation of nonexchangeable proton resonance chemical shifts as a probe of aberrant base pair formation in DNA Biochemistry. 25: 3983-3988. PMID 3741842 DOI: 10.1021/bi00362a002  1
1986 Eritja R, Kaplan BE, Mhaskar D, Sowers LC, Petruska J, Goodman MF. Synthesis and properties of defined DNA oligomers containing base mispairs involving 2-aminopurine. Nucleic Acids Research. 14: 5869-84. PMID 3737416 DOI: 10.1093/nar/14.14.5869  1
1986 Sowers LC, Fazakerley GV, Eritja R, Kaplan BE, Goodman MF. Base pairing and mutagenesis: observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMR. Proceedings of the National Academy of Sciences of the United States of America. 83: 5434-8. PMID 3461441 DOI: 10.1073/pnas.83.15.5434  1
1986 Petruska J, Sowers LC, Goodman MF. Comparison of nucleotide interactions in water, proteins, and vacuum: Model for DNA polymerase fidelity Proceedings of the National Academy of Sciences of the United States of America. 83: 1559-1562. PMID 3456600 DOI: 10.1073/pnas.83.6.1559  1
1986 Eritja R, Horowitz DM, Walker PA, Ziehler-Martin JP, Boosalis MS, Goodman MF, Itakura K, Kaplan BE. Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine. Nucleic Acids Research. 14: 8135-53. PMID 3095793 DOI: 10.1093/nar/14.20.8135  1
1985 Goodman MF, Hopkins RL, Lasken R, Mhaskar DN. The biochemical basis of 5-bromouracil- and 2-aminopurine-induced mutagenesis Basic Life Sciences. 31: 409-423. PMID 3994630 DOI: 10.1007/978-1-4613-2449-2_25  1
1985 Lasken RS, Goodman MF. A fidelity assay using 'dideoxy' DNA sequencing: A measurement of sequence dependence and frequency of forming 5-bromouracil.guanine base mispairs Proceedings of the National Academy of Sciences of the United States of America. 82: 1301-1305. PMID 3856263 DOI: 10.1073/pnas.82.5.1301  1
1982 Goodman MF, Watanabe SM, Branscomb EW. Passive polymerase control of DNA replication fidelity: evidence against unfavored tautomer involvement in 2-aminopurine-induced base-transition mutations Basic Life Sciences. 20: 213-229. PMID 7115267 DOI: 10.1007/978-1-4613-3476-7_13  1
1982 Watanabe SM, Goodman MF. Kinetic measurement of 2-aminopurine·cytosine and 2-aminopurine·thymine base pairs as a test of DNA polymerase fidelity mechanisms Proceedings of the National Academy of Sciences of the United States of America. 79: 6429-6433. PMID 6959128 DOI: 10.1073/pnas.79.21.6429  1
1981 Watanabe SM, Goodman MF. On the molecular basis of transition mutations: frequencies of forming 2-aminopurine.cytosine and adenine.cytosine base mispairs in vitro Proceedings of the National Academy of Sciences of the United States of America. 78: 2864-2868. PMID 6942407 DOI: 10.1073/pnas.78.5.2864  1
1981 Kay KG, Stone J, Thiele E, Goodman MF. A derivation of the master equation by restricted quantum exchange Chemical Physics Letters. 82: 539-542. DOI: 10.1016/0009-2614(81)85436-X  1
1981 Stephenson JC, Bialkowski SE, King DS, Thiele E, Stone J, Goodman MF. A quantitative test of unimolecular rate theory in the multiphoton dissociation of CF2CFCl The Journal of Chemical Physics. 74: 3905-3909.  1
1980 Hopkins RL, Goodman MF. Deoxyribonucleotide pools, base pairing, and sequence configuration affecting bromodeoxyuridine- and 2-aminopurine-induced mutagenesis Proceedings of the National Academy of Sciences of the United States of America. 77: 1801-1805. PMID 6929522 DOI: 10.1073/pnas.77.4.1801  1
1980 Stone J, Thiele E, Goodman MF. Restricted quantum exchange theory for intramolecular vibrational relaxation in polyatomic molecules Chemical Physics Letters. 71: 171-176. DOI: 10.1016/0009-2614(80)85314-0  1
1980 Thiele E, Goodman MF, Stone J. Concerning the effect of laser pulse shape on the product yield in collisionless MPD Chemical Physics Letters. 72: 34-38. DOI: 10.1016/0009-2614(80)80235-1  1
1980 Thiele E, Goodman MF, Stone J. Restricted intramolecular vibrational relaxation in polyatomics and laser selective effects Chemical Physics Letters. 69: 18-23. DOI: 10.1016/0009-2614(80)80004-2  1
1979 Hopkins R, Goodman MF. Asymmetry in forming 2-aminopurine · hydroxymethylcytosine heteroduplexes; a model giving misincorporation frequencies and rounds of DNA replication from base-pair populations in vivo Journal of Molecular Biology. 135: 1-22. PMID 529285 DOI: 10.1016/0022-2836(79)90337-1  1
1979 Horsley JA, Stone J, Goodman MF, Dows DA. A unified model for multiple photon dissociation of SF6 Chemical Physics Letters. 66: 461-466. DOI: 10.1016/0009-2614(79)80317-6  1
1979 Thiele E, Stone J, Goodman MF. On the nature of laser-induced energy distributions in polyatomic molecules Chemical Physics Letters. 66: 457-460. DOI: 10.1016/0009-2614(79)80316-4  1
1978 Stone J, Goodman MF. Laser excitation of multilevel systems: Limitations on the use of Wilcox-Lamb and other rate-equation approximations Physical Review A. 18: 2642-2654. DOI: 10.1103/PhysRevA.18.2642  1
1978 Stone J, Goodman MF. Laser-induced rate processes in gases: Intermolecular and intramolecular relaxation in a polyatomic molecule Physical Review A. 18: 2618-2641. DOI: 10.1103/PhysRevA.18.2618  1
1977 Seraydarian MW, Artaza L, Goodman MF. Adriamycin: Effect on mammalian cardiac cells in culture I. Cell population and energy metabolism Journal of Molecular and Cellular Cardiology. 9. PMID 559773 DOI: 10.1016/S0022-2828(77)80004-7  1
1977 Goodman MF, Hopkins R, Gore WC. 2-Aminopurine-induced mutagenesis in T4 bacteriophage: A model relating mutation frequency to 2-aminopurine incorporation in DNA Proceedings of the National Academy of Sciences of the United States of America. 74: 4806-4810. PMID 270713 DOI: 10.1073/pnas.74.11.4806  1
1976 Stone J, Goodman MF. Nontransient phase-coherent effects in multilevel systems Physical Review A. 14: 380-382. DOI: 10.1103/PhysRevA.14.380  1
1976 Stone J, Goodman MF, Dows DA. Laser-induced multiphoton decomposition: isotope separation in SF6 Chemical Physics Letters. 44: 411-414. DOI: 10.1016/0009-2614(76)80694-X  1
1974 Bessman MJ, Muzyczka N, Goodman MF, Schnaar RL. Studies on the biochemical basis of spontaneous mutation. II. The incorporation of a base and its analogue into DNA by wild-type, mutator and antimutator DNA polymerases Journal of Molecular Biology. 88: 409-421. PMID 4616089 DOI: 10.1016/0022-2836(74)90491-4  1
1974 Goodman MF, Bessman MJ, Bachur NR. Adriamycin and daunorubicin inhibition of mutant T4 DNA polymerases Proceedings of the National Academy of Sciences of the United States of America. 71: 1193-1196. PMID 4524632 DOI: 10.1073/pnas.71.4.1193  1
1974 Goodman MF, Gore WC, Muzyczka N, Bessman MJ. Studies on the biochemical basis of spontaneous mutation. III. Rate model for DNA polymerase-effected nucleotide misincorporation Journal of Molecular Biology. 88: 243-235. PMID 4452997 DOI: 10.1016/0022-2836(74)90492-6  1
1973 Goodman MF, Thiele E. Laser sideband spectroscopy: A macromolecular probe Analytical Biochemistry. 51: 97-110. PMID 4688028 DOI: 10.1016/0003-2697(73)90456-9  1
1973 Stone J, Thiele E, Goodman MF. Laser-induced rate processes in gases: Phase coherence in an N-level model Journal of Chemical Physics. 59: 2909-2918. DOI: 10.1063/1.1680423  1
1972 Goodman MF, Thiele E. Laser-induced rate processes in gases: Dynamics, unimolecular decay, and scattered field Physical Review A. 5: 1355-1364. DOI: 10.1103/PhysRevA.5.1355  1
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