Yitzhak Tor - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 
Area:
Polymer Chemistry, Biochemistry

180 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Sinkeldam RW, Tor Y. FRET Assay for Ligands Targeting the Bacterial A-Site RNA. Methods in Molecular Biology (Clifton, N.J.). 1973: 251-260. PMID 31016707 DOI: 10.1007/978-1-4939-9216-4_16  0.72
2018 Ludford PT, Rovira AR, Fin A, Tor Y. Fluorescing Isofunctional Ribonucleosides: Assessing Adenosine Deaminase Activity and Inhibition. Chembiochem : a European Journal of Chemical Biology. PMID 30566279 DOI: 10.1002/cbic.201800665  0.32
2017 Tor Y, Hallé F, Fin A, Rovira AR. Emissive synthetic cofactors: enzymatic interconversions of tzA analogues of ATP, NAD+, NADH, NADP+ and NADPH. Angewandte Chemie (International Ed. in English). PMID 29228460 DOI: 10.1002/anie.201711935  0.32
2017 Rovira AR, Fin A, Tor Y. Emissive synthetic cofactors: An isomorphic, isofunctional and re-sponsive NAD+ analogue. Journal of the American Chemical Society. PMID 29043790 DOI: 10.1021/jacs.7b05852  0.32
2017 Liu W, Shin D, Ng M, Sanbonmatsu KY, Tor Y, Cooperman BS. Stringent Nucleotide Recognition by the Ribosome at the Middle Codon Position. Molecules (Basel, Switzerland). 22. PMID 28850078 DOI: 10.3390/molecules22091427  0.32
2017 Rubinstein I, Yaakov N, Chaikin Y, Wexselblatt E, Tor Y, Vaskevich A. Application of Surface Click Reactions to Localized Surface Plasmon Resonance (LSPR) Biosensing. Chemistry (Weinheim An Der Bergstrasse, Germany). PMID 28556288 DOI: 10.1002/chem.201701511  0.32
2017 Rovira AR, Fin A, Tor Y. Expanding a fluorescent RNA alphabet: synthesis, photophysics and utility of isothiazole-derived purine nucleoside surrogates. Chemical Science. 8: 2983-2993. PMID 28451365 DOI: 10.1039/c6sc05354h  0.32
2017 Kilin V, Gavvala K, Barthes NP, Michel BY, Shin D, Boudier C, Mauffret O, Yashchuk V, Mousli M, Ruff M, Granger F, Eiler S, Bronner C, Tor Y, Burger A, et al. Dynamics of methylated cytosine flipping by UHRF1. Journal of the American Chemical Society. PMID 28112929 DOI: 10.1021/jacs.7b00154  0.32
2016 Hamill KM, McCoy LS, Wexselblatt E, Esko JD, Tor Y. Polymyxins Facilitate Entry into Mammalian Cells. Chemical Science. 7: 5059-5068. PMID 28044098 DOI: 10.1039/C6SC00488A  0.64
2016 Li Y, Fin A, McCoy L, Tor Y. Polymerase-Mediated Site-Specific Incorporation of a Synthetic Fluorescent Isomorphic G Surrogate into RNA. Angewandte Chemie (International Ed. in English). PMID 28000329 DOI: 10.1002/anie.201609327  0.32
2016 Hopkins PA, McCoy LS, Tor Y. Enzymatic incorporation and utilization of an emissive 6-azauridine. Organic & Biomolecular Chemistry. PMID 27981333 DOI: 10.1039/c6ob02080a  0.64
2016 Sholokh M, Improta R, Mori M, Sharma R, Kenfack C, Shin D, Voltz K, Stote RH, Zaporozhets OA, Botta M, Tor Y, Mély Y. Tautomers of a Fluorescent G Surrogate and Their Distinct Photophysics Provide Additional Information Channels. Angewandte Chemie (International Ed. in English). PMID 27273741 DOI: 10.1002/anie.201601688  1
2015 Kong B, Joshi T, Belousoff MJ, Tor Y, Graham B, Spiccia L. Neomycin B-cyclen conjugates and their Zn(II) complexes as RNA-binding agents. Journal of Inorganic Biochemistry. PMID 26786595 DOI: 10.1016/j.jinorgbio.2015.11.029  1
2015 Rovira AR, Fin A, Tor Y. Chemical Mutagenesis of an Emissive RNA Alphabet. Journal of the American Chemical Society. 137: 14602-5. PMID 26523462 DOI: 10.1021/jacs.5b10420  1
2015 Mizrahi RA, Shin D, Sinkeldam RW, Phelps KJ, Fin A, Tantillo DJ, Tor Y, Beal PA. A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme. Angewandte Chemie (International Ed. in English). PMID 26095193 DOI: 10.1002/anie.201502070  1
2015 Wexselblatt E, Esko JD, Tor Y. GNeosomes: Highly Lysosomotropic Nanoassemblies for Lysosomal Delivery. Acs Nano. 9: 3961-8. PMID 25831231 DOI: 10.1021/nn507382n  1
2015 Rios AC, Yu HT, Tor Y. Hydrolytic Fitness of N-glycosyl Bonds: Comparing the Deglycosylation Kinetics of Modified, Alternative and Native Nucleosides. Journal of Physical Organic Chemistry. 28: 173-180. PMID 25750482 DOI: 10.1002/poc.3318  1
2015 Sholokh M, Sharma R, Shin D, Das R, Zaporozhets OA, Tor Y, Mély Y. Conquering 2-aminopurine's deficiencies: highly emissive isomorphic guanosine surrogate faithfully monitors guanosine conformation and dynamics in DNA. Journal of the American Chemical Society. 137: 3185-8. PMID 25714036 DOI: 10.1021/ja513107r  1
2015 Shin D, Lönn P, Dowdy SF, Tor Y. Cellular activity of siRNA oligonucleotides containing synthetic isomorphic nucleoside surrogates. Chemical Communications (Cambridge, England). 51: 1662-5. PMID 25500944 DOI: 10.1039/c4cc08809c  1
2015 Weiss RJ, Gordts PLSM, Le D, Xu D, Esko JD, Tor Y. Small molecule antagonists of cell-surface heparan sulfate and heparin-protein interactions Chemical Science. 6: 5984-5993. DOI: 10.1039/c5sc01208b  1
2015 Tor Y, Siegel JS. 50 years of physical organic chemistry Journal of Physical Organic Chemistry. 28: 172. DOI: 10.1002/poc.3407  1
2014 Hopkins PA, Sinkeldam RW, Tor Y. Visibly emissive and responsive extended 6-aza-uridines. Organic Letters. 16: 5290-3. PMID 25285451 DOI: 10.1021/ol502435d  1
2014 McCoy LS, Shin D, Tor Y. Isomorphic emissive GTP surrogate facilitates initiation and elongation of in vitro transcription reactions. Journal of the American Chemical Society. 136: 15176-84. PMID 25255464 DOI: 10.1021/ja5039227  1
2014 Fair RJ, Tor Y. Antibiotics and bacterial resistance in the 21st century. Perspectives in Medicinal Chemistry. 6: 25-64. PMID 25232278 DOI: 10.4137/PMC.S14459  1
2014 Fair RJ, McCoy LS, Hensler ME, Aguilar B, Nizet V, Tor Y. Singly modified amikacin and tobramycin derivatives show increased rRNA A-site binding and higher potency against resistant bacteria. Chemmedchem. 9: 2164-71. PMID 25055981 DOI: 10.1002/cmdc.201402175  1
2014 Wexselblatt E, Esko JD, Tor Y. On guanidinium and cellular uptake. The Journal of Organic Chemistry. 79: 6766-74. PMID 25019333 DOI: 10.1021/jo501101s  1
2014 Müller UF, Tor Y. Citric acid and the RNA world. Angewandte Chemie (International Ed. in English). 53: 5245-7. PMID 24828228 DOI: 10.1002/anie.201400847  1
2014 Inoue M, Wexselblatt E, Esko JD, Tor Y. Macromolecular uptake of alkyl-chain-modified guanidinoglycoside molecular transporters. Chembiochem : a European Journal of Chemical Biology. 15: 676-80. PMID 24677320 DOI: 10.1002/cbic.201300606  1
2014 Lane RS, Jones R, Sinkeldam RW, Tor Y, Magennis SW. Two-photon-induced fluorescence of isomorphic nucleobase analogs. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 867-71. PMID 24604669 DOI: 10.1002/cphc.201400031  1
2014 Saenz R, Messmer B, Futalan D, Tor Y, Larsson M, Daniels G, Esener S, Messmer D. Activity of the HMGB1-derived immunostimulatory peptide Hp91 resides in the helical C-terminal portion and is enhanced by dimerization. Molecular Immunology. 57: 191-9. PMID 24172222 DOI: 10.1016/j.molimm.2013.09.007  1
2013 Rios AC, Tor Y. On the Origin of the Canonical Nucleobases: An Assessment of Selection Pressures across Chemical and Early Biological Evolution. Israel Journal of Chemistry. 53: 469-483. PMID 25284884 DOI: 10.1002/ijch.201300009  1
2013 Sinkeldam RW, McCoy LS, Shin D, Tor Y. Enzymatic interconversion of isomorphic fluorescent nucleosides: adenosine deaminase transforms an adenosine analogue into an inosine analogue. Angewandte Chemie (International Ed. in English). 52: 14026-30. PMID 24288262 DOI: 10.1002/anie.201307064  1
2013 McCoy LS, Roberts KD, Nation RL, Thompson PE, Velkov T, Li J, Tor Y. Polymyxins and analogues bind to ribosomal RNA and interfere with eukaryotic translation in vitro. Chembiochem : a European Journal of Chemical Biology. 14: 2083-6. PMID 24105917 DOI: 10.1002/cbic.201300496  1
2013 Peters JP, Yelgaonkar SP, Srivatsan SG, Tor Y, James Maher L. Mechanical properties of DNA-like polymers. Nucleic Acids Research. 41: 10593-604. PMID 24013560 DOI: 10.1093/nar/gkt808  1
2013 Liu W, Shin D, Tor Y, Cooperman BS. Monitoring translation with modified mRNAs strategically labeled with isomorphic fluorescent guanosine mimetics. Acs Chemical Biology. 8: 2017-23. PMID 23865809 DOI: 10.1021/cb400256h  1
2013 Noé MS, Sinkeldam RW, Tor Y. Oligodeoxynucleotides containing multiple thiophene-modified isomorphic fluorescent nucleosides. The Journal of Organic Chemistry. 78: 8123-8. PMID 23859712 DOI: 10.1021/jo4008964  1
2013 Inoue M, Tong W, Esko JD, Tor Y. Aggregation-mediated macromolecular uptake by a molecular transporter. Acs Chemical Biology. 8: 1383-8. PMID 23621420 DOI: 10.1021/cb400172h  1
2013 Frolov L, Dix A, Tor Y, Tesler AB, Chaikin Y, Vaskevich A, Rubinstein I. Direct observation of aminoglycoside-RNA binding by localized surface plasmon resonance spectroscopy. Analytical Chemistry. 85: 2200-7. PMID 23368968 DOI: 10.1021/ac3029079  1
2013 Tor Y. Contemporary topics in nucleic acid chemistry Israel Journal of Chemistry. 53: 323-324. DOI: 10.1002/ijch.201310006  1
2012 Rios AC, Tor Y. Refining the genetic alphabet: a late-period selection pressure? Astrobiology. 12: 884-91. PMID 22984873 DOI: 10.1089/ast.2011.0789  1
2012 Sinkeldam RW, Hopkins PA, Tor Y. Modified 6-aza uridines: highly emissive pH-sensitive fluorescent nucleosides. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 13: 3350-6. PMID 22777983 DOI: 10.1002/cphc.201200375  1
2012 Noé MS, Ríos AC, Tor Y. Design, synthesis, and spectroscopic properties of extended and fused pyrrolo-dC and pyrrolo-C analogs. Organic Letters. 14: 3150-3. PMID 22646728 DOI: 10.1021/ol3012327  1
2012 Fair RJ, Hensler ME, Thienphrapa W, Dam QN, Nizet V, Tor Y. Selectively guanidinylated aminoglycosides as antibiotics. Chemmedchem. 7: 1237-44. PMID 22639134 DOI: 10.1002/cmdc.201200150  1
2011 Wanunu M, Bhattacharya S, Xie Y, Tor Y, Aksimentiev A, Drndic M. Nanopore analysis of individual RNA/antibiotic complexes. Acs Nano. 5: 9345-53. PMID 22067050 DOI: 10.1021/nn203764j  1
2011 McCoy LS, Xie Y, Tor Y. Antibiotics that target protein synthesis. Wiley Interdisciplinary Reviews. Rna. 2: 209-32. PMID 21957007 DOI: 10.1002/wrna.60  1
2011 Shin D, Sinkeldam RW, Tor Y. Emissive RNA alphabet. Journal of the American Chemical Society. 133: 14912-5. PMID 21866967 DOI: 10.1021/ja206095a  1
2011 Sinkeldam RW, Marcus P, Uchenik D, Tor Y. Multisensing emissive pyrimidine. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 12: 2260-5. PMID 21698743 DOI: 10.1002/cphc.201100315  1
2011 Shukla GC, Haque F, Tor Y, Wilhelmsson LM, Toulmé JJ, Isambert H, Guo P, Rossi JJ, Tenenbaum SA, Shapiro BA. A boost for the emerging field of RNA nanotechnology. Acs Nano. 5: 3405-18. PMID 21604810 DOI: 10.1021/nn200989r  1
2011 Shin D, Tor Y. Bifacial nucleoside as a surrogate for both T and A in duplex DNA. Journal of the American Chemical Society. 133: 6926-9. PMID 21495708 DOI: 10.1021/ja201397e  1
2011 Sinkeldam RW, Wheat AJ, Boyaci H, Tor Y. Emissive nucleosides as molecular rotors. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 12: 567-70. PMID 21344595 DOI: 10.1002/cphc.201001002  1
2010 Dix AV, Fischer L, Sarrazin S, Redgate CP, Esko JD, Tor Y. Cooperative, heparan sulfate-dependent cellular uptake of dimeric guanidinoglycosides. Chembiochem : a European Journal of Chemical Biology. 11: 2302-10. PMID 20931643 DOI: 10.1002/cbic.201000399  1
2010 Xie Y, Maxson T, Tor Y. Fluorescent nucleoside analogue displays enhanced emission upon pairing with guanine. Organic & Biomolecular Chemistry. 8: 5053-5. PMID 20862439 DOI: 10.1039/c0ob00413h  1
2010 Xie Y, Maxson T, Tor Y. Fluorescent ribonucleoside as a FRET acceptor for tryptophan in native proteins. Journal of the American Chemical Society. 132: 11896-7. PMID 20690779 DOI: 10.1021/ja105244t  1
2010 Xie Y, Dix AV, Tor Y. Antibiotic selectivity for prokaryotic vs. eukaryotic decoding sites. Chemical Communications (Cambridge, England). 46: 5542-4. PMID 20464029 DOI: 10.1039/c0cc00423e  1
2010 Sarrazin S, Wilson B, Sly WS, Tor Y, Esko JD. Guanidinylated neomycin mediates heparan sulfate-dependent transport of active enzymes to lysosomes. Molecular Therapy : the Journal of the American Society of Gene Therapy. 18: 1268-74. PMID 20442709 DOI: 10.1038/mt.2010.78  1
2010 Sinkeldam RW, Greco NJ, Tor Y. Fluorescent analogs of biomolecular building blocks: design, properties, and applications. Chemical Reviews. 110: 2579-619. PMID 20205430 DOI: 10.1021/cr900301e  1
2010 Tor Y. New fluorescent nucleosides for real-time exploration of nucleic acids Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7576. DOI: 10.1117/12.840086  1
2010 Xie Y, Tam VK, Tor Y. The Interactions of Small Molecules with DNA and RNA The Chemical Biology of Nucleic Acids. 115-140. DOI: 10.1002/9780470664001.ch6  1
2009 Xie Y, Dix AV, Tor Y. FRET enabled real time detection of RNA-small molecule binding. Journal of the American Chemical Society. 131: 17605-14. PMID 19908830 DOI: 10.1021/ja905767g  1
2009 Rios AC, Tor Y. Model systems: how chemical biologists study RNA. Current Opinion in Chemical Biology. 13: 660-8. PMID 19879179 DOI: 10.1016/j.cbpa.2009.09.028  1
2009 Greco NJ, Sinkeldam RW, Tor Y. An emissive C analog distinguishes between G, 8-oxoG, and T. Organic Letters. 11: 1115-8. PMID 19196162 DOI: 10.1021/ol802656n  1
2009 Belousoff MJ, Ung P, Forsyth CM, Tor Y, Spiccia L, Graham B. New macrocyclic terbium(III) complex for use in RNA footprinting experiments. Journal of the American Chemical Society. 131: 1106-14. PMID 19119812 DOI: 10.1021/ja807301r  1
2009 Brown JR, Yang F, Sinha A, Ramakrishnan B, Tor Y, Qasba PK, Esko JD. Deoxygenated disaccharide analogs as specific inhibitors of beta1-4-galactosyltransferase 1 and selectin-mediated tumor metastasis. The Journal of Biological Chemistry. 284: 4952-9. PMID 19106107 DOI: 10.1074/jbc.M805782200  1
2009 Belousoff MJ, Graham B, Spiccia L, Tor Y. Cleavage of RNA oligonucleotides by aminoglycosides. Organic & Biomolecular Chemistry. 7: 30-3. PMID 19081939 DOI: 10.1039/b813252f  1
2009 Srivatsan SG, Tor Y. Enzymatic incorporation of emissive pyrimidine ribonucleotides. Chemistry, An Asian Journal. 4: 419-27. PMID 19072942 DOI: 10.1002/asia.200800370  1
2009 Belousoff MJ, Gasser G, Graham B, Tor Y, Spiccia L. Binding of HIV-1 TAR mRNA to a peptide nucleic acid oligomer and its conjugates with metal-ion-binding multidentate ligands. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 14: 287-300. PMID 19015900 DOI: 10.1007/s00775-008-0448-6  1
2009 Tor Y. Exploring RNA-ligand interactions Pure and Applied Chemistry. 81: 263-272. DOI: 10.1351/PAC-CON-08-08-16  1
2008 Schuksz M, Fuster MM, Brown JR, Crawford BE, Ditto DP, Lawrence R, Glass CA, Wang L, Tor Y, Esko JD. Surfen, a small molecule antagonist of heparan sulfate. Proceedings of the National Academy of Sciences of the United States of America. 105: 13075-80. PMID 18725627 DOI: 10.1073/pnas.0805862105  1
2008 Srivatsan SG, Greco NJ, Tor Y. A highly emissive fluorescent nucleoside that signals the activity of toxic ribosome-inactivating proteins. Angewandte Chemie (International Ed. in English). 47: 6661-5. PMID 18683267 DOI: 10.1002/anie.200802199  1
2008 Srivatsan SG, Weizman H, Tor Y. A highly fluorescent nucleoside analog based on thieno[3,4-d]pyrimidine senses mismatched pairing. Organic & Biomolecular Chemistry. 6: 1334-8. PMID 18385838 DOI: 10.1039/b801054d  1
2008 Sinkeldam RW, Greco NJ, Tor Y. Polarity of major grooves explored by using an isosteric emissive nucleoside. Chembiochem : a European Journal of Chemical Biology. 9: 706-9. PMID 18286575 DOI: 10.1002/cbic.200700714  1
2008 Staple DW, Venditti V, Niccolai N, Elson-Schwab L, Tor Y, Butcher SE. Guanidinoneomycin B recognition of an HIV-1 RNA helix. Chembiochem : a European Journal of Chemical Biology. 9: 93-102. PMID 18058789 DOI: 10.1002/cbic.200700251  1
2007 Srivatsan SG, Tor Y. Using an emissive uridine analogue for assembling fluorescent HIV-1 TAR constructs. Tetrahedron. 63: 3601-3607. PMID 18431440 DOI: 10.1016/j.tet.2007.01.074  1
2007 Greco NJ, Tor Y. Furan Decorated Nucleoside Analogues as Fluorescent Probes: synthesis, photophysical evaluation and site-specific incorporation. Tetrahedron. 63: 3515-3527. PMID 18431439 DOI: 10.1016/j.tet.2007.01.073  1
2007 Sinkeldam RW, Tor Y. To D or not to D? On estimating the microenvironment polarity of biomolecular cavities. Organic & Biomolecular Chemistry. 5: 2523-8. PMID 18019524 DOI: 10.1039/b707719j  1
2007 Glazer EC, Magde D, Tor Y. Ruthenium complexes that break the rules: structural features controlling dual emission. Journal of the American Chemical Society. 129: 8544-51. PMID 17571887 DOI: 10.1021/ja071124f  1
2007 Srivatsan SG, Tor Y. Synthesis and enzymatic incorporation of a fluorescent pyrimidine ribonucleotide. Nature Protocols. 2: 1547-55. PMID 17571062 DOI: 10.1038/nprot.2007.222  1
2007 Greco NJ, Tor Y. Synthesis and site-specific incorporation of a simple fluorescent pyrimidine. Nature Protocols. 2: 305-16. PMID 17406590 DOI: 10.1038/nprot.2006.464  1
2007 Barbieri CM, Kaul M, Bozza-Hingos M, Zhao F, Tor Y, Hermann T, Pilch DS. Defining the molecular forces that determine the impact of neomycin on bacterial protein synthesis: importance of the 2'-amino functionality. Antimicrobial Agents and Chemotherapy. 51: 1760-9. PMID 17353247 DOI: 10.1128/AAC.01267-06  1
2007 Tam VK, Kwong D, Tor Y. Fluorescent HIV-1 Dimerization Initiation Site: design, properties, and use for ligand discovery. Journal of the American Chemical Society. 129: 3257-66. PMID 17319662 DOI: 10.1021/ja0675797  1
2007 Elson-Schwab L, Garner OB, Schuksz M, Crawford BE, Esko JD, Tor Y. Guanidinylated neomycin delivers large, bioactive cargo into cells through a heparan sulfate-dependent pathway. The Journal of Biological Chemistry. 282: 13585-91. PMID 17311923 DOI: 10.1074/jbc.M700463200  1
2007 Srivatsan SG, Tor Y. Fluorescent pyrimidine ribonucleotide: synthesis, enzymatic incorporation, and utilization. Journal of the American Chemical Society. 129: 2044-53. PMID 17256858 DOI: 10.1021/ja066455r  1
2007 Tor Y, Del Valle S, Jaramillo D, Srivatsan SG, Rios A, Weizman H. Designing new isomorphic fluorescent nucleobase analogues: the thieno[3,2-d]pyrimidine core Tetrahedron. 63: 3608-3614. DOI: 10.1016/j.tet.2007.01.075  1
2007 Tor Y. Fluorescent nucleoside analogs: synthesis, properties, and applications Tetrahedron. 63: 3425-3426. DOI: 10.1016/j.tet.2007.01.070  1
2007 Elson-Schwab L, Tor Y. Targeting HIV-1 RNA with Aminoglycoside Antibiotics and Their Derivatives Aminoglycoside Antibiotics: From Chemical Biology to Drug Discovery. 267-287. DOI: 10.1002/9780470149676.ch10  1
2006 Blount KF, Tor Y. A tale of two targets: differential RNA selectivity of nucleobase-aminoglycoside conjugates. Chembiochem : a European Journal of Chemical Biology. 7: 1612-21. PMID 16915600 DOI: 10.1002/cbic.200600109  1
2006 Talley TT, Yalda S, Ho KY, Tor Y, Soti FS, Kem WR, Taylor P. Spectroscopic analysis of benzylidene anabaseine complexes with acetylcholine binding proteins as models for ligand-nicotinic receptor interactions. Biochemistry. 45: 8894-902. PMID 16846232 DOI: 10.1021/bi060534y  1
2006 Jaramillo D, Wheate NJ, Ralph SF, Howard WA, Tor Y, Aldrich-Wright JR. Polyamide platinum anticancer complexes designed to target specific DNA sequences. Inorganic Chemistry. 45: 6004-13. PMID 16842007 DOI: 10.1021/ic060383n  1
2006 Tam VK, Liu Q, Tor Y. Extended ethidium bromide analogue as a triple helix intercalator: synthesis, photophysical properties and nucleic acids binding. Chemical Communications (Cambridge, England). 2684-6. PMID 16786087 DOI: 10.1039/b604281c  1
2006 Greco NJ, Hysell M, Goldenberg JR, Rheingold AL, Tor Y. Alkyne-containing chelating ligands: synthesis, properties and metal coordination of 1,2-di(quinolin-8-yl)ethyne. Dalton Transactions (Cambridge, England : 2003). 2288-90. PMID 16688316 DOI: 10.1039/b603983a  1
2006 Jouvenot D, Glazer EC, Tor Y. Photodimerizable ditopic ligand. Organic Letters. 8: 1987-90. PMID 16671763 DOI: 10.1021/ol060253i  1
2006 Yu DH, Macdonald J, Josephs S, Liu Q, Nguy V, Tor Y, Wong-Staal F, Li QX. MDDD, a 4,9-diazapyrenium derivative, is selectively toxic to glioma cells by inducing growth arrest at G0/G1 independently of p53. Investigational New Drugs. 24: 489-98. PMID 16633716 DOI: 10.1007/s10637-006-7590-1  1
2006 Tor Y. The ribosomal A-site as an inspiration for the design of RNA binders Biochimie. 88: 1045-1051. PMID 16581175 DOI: 10.1016/j.biochi.2006.03.005  1
2006 Nemat-Nasser S, Zamani S, Tor Y. Effect of solvents on the chemical and physical properties of ionic polymer-metal composites Journal of Applied Physics. 99. DOI: 10.1063/1.2194127  1
2005 Hysell M, Siegel JS, Tor Y. Synthesis and stability of exocyclic triazine nucleosides. Organic & Biomolecular Chemistry. 3: 2946-52. PMID 16186926 DOI: 10.1039/b503757c  1
2005 Greco NJ, Tor Y. Simple fluorescent pyrimidine analogues detect the presence of DNA abasic sites. Journal of the American Chemical Society. 127: 10784-5. PMID 16076156 DOI: 10.1021/ja052000a  1
2005 Zhao F, Zhao Q, Blount KF, Han Q, Tor Y, Hermann T. Molecular recognition of RNA by neomycin and a restricted neomycin derivative. Angewandte Chemie (International Ed. in English). 44: 5329-34. PMID 16037995 DOI: 10.1002/anie.200500903  1
2005 Blount KF, Zhao F, Hermann T, Tor Y. Conformational constraint as a means for understanding RNA-aminoglycoside specificity. Journal of the American Chemical Society. 127: 9818-29. PMID 15998086 DOI: 10.1021/ja050918w  1
2005 Siegel JS, Tor Y. Genetic alphabetic order: what came before A? Organic & Biomolecular Chemistry. 3: 1591-2. PMID 15858634 DOI: 10.1039/b500921a  1
2005 Glazer EC, Magde D, Tor Y. Dual emission from a family of conjugated dinuclear Ru(II) complexes. Journal of the American Chemical Society. 127: 4190-2. PMID 15783199 DOI: 10.1021/ja0440304  1
2005 Boer J, Blount KF, Luedtke NW, Elson-Schwab L, Tor Y. RNA-selective modification by a platinum(II) complex conjugated to amino- and guanidinoglycosides. Angewandte Chemie (International Ed. in English). 44: 927-32. PMID 15630712 DOI: 10.1002/anie.200461182  1
2005 Luedtke NW, Liu Q, Tor Y. On the electronic structure of ethidium. Chemistry (Weinheim An Der Bergstrasse, Germany). 11: 495-508. PMID 15549769 DOI: 10.1002/chem.200400559  1
2005 Hermann T, Tor Y. RNA as a target for small-molecule therapeutics Expert Opinion On Therapeutic Patents. 15: 49-62. DOI: 10.1517/13543776.15.1.49  1
2005 Glazer EC, Belyea B, Tor Y. A simple synthesis of isotopically pure 2,2′-dipyridyl-d8 Inorganic Chemistry Communications. 8: 517-519. DOI: 10.1016/j.inoche.2005.03.011  1
2004 Jaramillo D, Liu Q, Aldrich-Wright J, Tor Y. Synthesis of N-methylpyrrole and N-methylimidazole amino acids suitable for solid-phase synthesis. The Journal of Organic Chemistry. 69: 8151-3. PMID 15527311 DOI: 10.1021/jo048686r  1
2004 Aldrich-Wright J, Brodie C, Glazer EC, Luedtke NW, Elson-Schwab L, Tor Y. Symmetrical dinuclear complexes with high DNA affinity based on [Ru(dpq)2(phen)]2+. Chemical Communications (Cambridge, England). 1018-9. PMID 15069523 DOI: 10.1039/b316917k  1
2004 Aldrich-Wright J, Brodie C, Glazer EC, Luedtke NW, Elson-Schwab L, Tor Y. Symmetrical dinuclear complexes with high DNA affinity based on Ru(dpq)2(phen)2+ Chemical Communications. 10: 1018-1019.  1
2003 Luedtke NW, Liu Q, Tor Y. Synthesis, photophysical properties, and nucleic acid binding of phenanthridinium derivatives based on ethidium. Bioorganic & Medicinal Chemistry. 11: 5235-47. PMID 14604688 DOI: 10.1016/j.bmc.2003.08.006  1
2003 Luedtke NW, Carmichael P, Tor Y. Cellular uptake of aminoglycosides, guanidinoglycosides, and poly-arginine. Journal of the American Chemical Society. 125: 12374-5. PMID 14531657 DOI: 10.1021/ja0360135  1
2003 Tor Y. Targeting RNA with small molecules. Chembiochem : a European Journal of Chemical Biology. 4: 998-1007. PMID 14523917 DOI: 10.1002/cbic.200300680  1
2003 Luedtke NW, Liu Q, Tor Y. RNA-ligand interactions: affinity and specificity of aminoglycoside dimers and acridine conjugates to the HIV-1 Rev response element. Biochemistry. 42: 11391-403. PMID 14516190 DOI: 10.1021/bi034766y  1
2003 Luedtke NW, Hwang JS, Nava E, Gut D, Kol M, Tor Y. The DNA and RNA specificity of eilatin Ru(II) complexes as compared to eilatin and ethidium bromide. Nucleic Acids Research. 31: 5732-40. PMID 14500837 DOI: 10.1093/nar/gkg758  1
2003 Blount KF, Tor Y. Using pyrene-labeled HIV-1 TAR to measure RNA-small molecule binding. Nucleic Acids Research. 31: 5490-500. PMID 14500811 DOI: 10.1093/nar/gkg755  1
2003 Luedtke NW, Tor Y. Fluorescence-based methods for evaluating the RNA affinity and specificity of HIV-1 Rev-RRE inhibitors. Biopolymers. 70: 103-19. PMID 12925996 DOI: 10.1002/bip.10428  1
2003 Liu Q, Tor Y. Simple conversion of aromatic amines into azides. Organic Letters. 5: 2571-2. PMID 12841783 DOI: 10.1021/ol034919+  1
2003 Fineberg K, Fineberg T, Graessmann A, Luedtke NW, Tor Y, Lixin R, Jans DA, Loyter A. Inhibition of nuclear import mediated by the Rev-arginine rich motif by RNA molecules. Biochemistry. 42: 2625-33. PMID 12614157 DOI: 10.1021/bi0206199  1
2003 Tor Y. Metal-containing oligomers, dendrimers and biopolymers Comptes Rendus Chimie. 6: 755-766. DOI: 10.1016/S1631-0748(03)00134-6  1
2003 Tor Y. Editorial: RNA-ligand interactions Biopolymers. 70: 1-3. DOI: 10.1002/bip.10490  1
2002 Glazer EC, Tor Y. RuII complexes of "large-surface" ligands. Angewandte Chemie (International Ed. in English). 41: 4022-6. PMID 12412069 DOI: 10.1002/1521-3773(20021104)41:21<4022::AID-ANIE4022>3.0.CO;2-1  1
2002 Hurley DJ, Tor Y. Donor/acceptor interactions in systematically modified Ru(II)-Os(II) oligonucleotides. Journal of the American Chemical Society. 124: 13231-41. PMID 12405852 DOI: 10.1021/ja020172r  1
2002 Luedtke NW, Hwang JS, Glazer EC, Gut D, Kol M, Tor Y. Eilatin Ru(II) complexes display anti-HIV activity and enantiomeric diversity in the binding of RNA. Chembiochem : a European Journal of Chemical Biology. 3: 766-71. PMID 12203975 DOI: 10.1002/1439-7633(20020802)3:8<766::AID-CBIC766>3.0.CO;2-X  1
2002 Hurley DJ, Seaman SE, Mazura JC, Tor Y. Fluorescent 1,10-phenanthroline-containing oligonucleotides distinguish between perfect and mismatched base pairing. Organic Letters. 4: 2305-8. PMID 12098233 DOI: 10.1021/ol026043x  1
2002 Hurley DJ, Tor Y. Ru(II) and Os(II) nucleosides and oligonucleotides: synthesis and properties. Journal of the American Chemical Society. 124: 3749-62. PMID 11929265 DOI: 10.1021/ja0123103  1
2002 Weizman H, Tor Y. Redox-active metal-containing nucleotides: synthesis, tunability, and enzymatic incorporation into DNA. Journal of the American Chemical Society. 124: 1568-9. PMID 11853418 DOI: 10.1021/ja017193q  1
2002 Tor Y. Coordination compounds as synthetic building blocks Synlett. 1043-1054.  1
2001 Kirk SR, Luedtke NW, Tor Y. 2-Aminopurine as a real-time probe of enzymatic cleavage and inhibition of hammerhead ribozymes. Bioorganic & Medicinal Chemistry. 9: 2295-301. PMID 11553468 DOI: 10.1016/S0968-0896(01)00123-7  1
2001 Weizman H, Tor Y. 2,2′-bipyridine ligandoside: A novel building block for modifying DNA with intra-duplex metal complexes [2] Journal of the American Chemical Society. 123: 3375-3376. PMID 11457077 DOI: 10.1021/ja005785n  1
2001 Hurley DJ, Tor Y. Lowering the symmetry of difunctionalized coordination compounds via nucleophilic aromatic substitutions Tetrahedron Letters. 42: 7217-7220. DOI: 10.1016/S0040-4039(01)01540-4  1
2001 Liu Q, Luedtke NW, Tor Y. A simple conversion of amines into monosubstituted ureas in organic and aqueous solvents Tetrahedron Letters. 42: 1445-1447. DOI: 10.1016/S0040-4039(00)02289-9  1
2001 Weizman H, Tor Y. Oligo-ligandosides: A DNA mimetic approach to helicate formation Chemical Communications. 453-454.  1
2001 Joshi HS, Tor Y. Metal-containing DNA hairpins as hybridization probes Chemical Communications. 549-550.  1
2000 Baker TJ, Luedtke NW, Tor Y, Goodman M. Synthesis and anti-HIV activity of guanidinoglycosides. The Journal of Organic Chemistry. 65: 9054-8. PMID 11149851 DOI: 10.1021/jo001142e  1
2000 Luedtke NW, Tor Y. A Novel Solid-Phase Assembly for Identifying Potent and Selective RNA Ligands We thank Professors David Wilson and David Boykin for a generous gift of the aromatic amidine derivatives and Professor Kol for a generous gift of eilatin-containing complexes. We are grateful to Dr. Georg Schlechtingen and Professor Murray Goodman for assistance with peptide synthesis and to Ibis Therapeutics for partial support. N.W.L. is supported by a National Institute of Health Molecular Biophysics Training Grant (GM 08326). Angewandte Chemie (International Ed. in English). 39: 1788-1790. PMID 10934362 DOI: 10.1002/(SICI)1521-3773(20000515)39:10<1788::AID-ANIE1788>3.0.CO;2-6  1
2000 Friedler A, Friedler D, Luedtke NW, Tor Y, Loyter A, Gilon C. Development of a functional backbone cyclic mimetic of the HIV-1 Tat arginine-rich motif. The Journal of Biological Chemistry. 275: 23783-9. PMID 10764789 DOI: 10.1074/jbc.M002200200  1
2000 Kirk SR, Luedtke NW, Tor Y. Neomycin-acridine conjugate: A potent inhibitor of Rev-RRE binding [16] Journal of the American Chemical Society. 122: 980-981. DOI: 10.1021/ja993387i  1
2000 Luedtke NW, Baker TJ, Goodman M, Tor Y. Guanidinoglycosides: A novel family of RNA ligands [21] Journal of the American Chemical Society. 122: 12035-12036. DOI: 10.1021/ja002421m  1
1999 Kirk SR, Tor Y. tRNA(Phe) binds aminoglycoside antibiotics. Bioorganic & Medicinal Chemistry. 7: 1979-91. PMID 10530947 DOI: 10.1016/S0968-0896(99)00170-4  1
1999 Joshi HS, Jamshidi R, Tor Y. Conjugated 1,10-Phenanthrolines as Tunable Fluorophores. Angewandte Chemie (International Ed. in English). 38: 2721-2725. PMID 10508360 DOI: 10.1002/(SICI)1521-3773(19990917)38:18<2721::AID-ANIE2721>3.0.CO;2-5  1
1999 Michael K, Wang H, Tor Y. Enhanced RNA binding of dimerized aminoglycosides. Bioorganic & Medicinal Chemistry. 7: 1361-71. PMID 10465410 DOI: 10.1016/S0968-0896(99)00071-1  1
1999 Tor Y. RNA and the small molecule world Angewandte Chemie - International Edition. 38: 1579-1582. DOI: 10.1002/(SICI)1521-3773(19990601)38:11<1579::AID-ANIE1579>3.0.CO;2-H  1
1999 Hurley DJ, Roppe JR, Tor Y. Coordination compounds as building blocks: Simple synthesis of Ru(II)-containing amino acids and peptides Chemical Communications. 993-994.  1
1998 Wang H, Tor Y. Tobramycin-EDTA conjugate: A noninnocent affinity-cleaving reagent Bioorganic and Medicinal Chemistry Letters. 8: 3665-3670. PMID 9934492 DOI: 10.1016/S0960-894X(98)00663-5  1
1998 Tor Y, Hermann T, Westhof E. Deciphering RNA recognition: Aminoglycoside binding to the hammerhead ribozyme Chemistry and Biology. 5. PMID 9831530  1
1998 Hurley DJ, Tor Y. Metal-containing oligonucleotides: Solid-phase synthesis and luminescence properties [12] Journal of the American Chemical Society. 120: 2194-2195. DOI: 10.1021/ja9739998  1
1998 Wang H, Tor Y. RNA - aminoglycoside interactions: Design, synthesis, and binding of 'amino-aminoglycosides' to RNA Angewandte Chemie - International Edition in English. 37: 109-111.  1
1998 Thomas CW, Tor Y. Dendrimers and chirality Chirality. 10: 53-59.  1
1998 Michael K, Tor Y. Designing novel RNA binders Chemistry - a European Journal. 4: 2091-2098.  1
1998 Kirk SR, Tor Y. Hydrolysis of an RNA dinucleoside monophosphate by neomycin B Chemical Communications. 147-148.  1
1998 Connors PJ, Tzalis D, Dunnick AL, Tor Y. Coordination Compounds as Building Blocks: Single-Step Synthesis of Heteronuclear Multimetallic Complexes Containing RuII and OsII Inorganic Chemistry. 37: 1121-1123.  1
1997 Wang H, Tor Y. Electrostatic interactions in RNA aminoglycosides binding Journal of the American Chemical Society. 119: 8734-8735. DOI: 10.1021/ja9715105  1
1997 Tzalis D, Tor Y. Stereochemically-defined supramolecular architectures: Diastereomerically-pure multi-Ru(II) complexes Journal of the American Chemical Society. 119: 852-853. DOI: 10.1021/ja963760b  1
1997 Wang H, Tor Y. Dimeric aminoglycosides: Design, synthesis and RNA binding Bioorganic and Medicinal Chemistry Letters. 7: 1951-1956. DOI: 10.1016/S0960-894X(97)00339-9  1
1997 Tzalis D, Tor Y. The organic chemistry of coordination compounds: Unprecedented substitution reactions of functionalized polypyridine complexes Angewandte Chemie - International Edition in English. 36: 2666-2668.  1
1996 Nicolaou KC, Smith BM, Ajito K, Komatsu H, Gomez-Paloma L, Tor Y. DNA-carbohydrate interactions. Specific binding of head-to-head and head-to-tail dimers of the calicheamicin oligosaccharide to duplex DNA Journal of the American Chemical Society. 118: 2303-2304. DOI: 10.1021/ja9538142  1
1996 Tzalis D, Tor Y. Toward self-assembling dendrimers: Metal complexation induces the assembly of hyperbranched structures Tetrahedron Letters. 37: 8293-8296. DOI: 10.1016/0040-4039(96)01940-5  1
1996 Tzalis D, Tor Y. Coordination compounds as building blocks: Single-step synthesis of multi-ruthenium(II) complexes Chemical Communications. 1043-1044.  1
1995 Tzalis D, Tor Y. Tuning the electronic properties of phenanthroline ligands: 3,8-bis(arylethynyl)-1,10-phenanthrolines and their Ru(II) complexes Tetrahedron Letters. 36: 6017-6020. DOI: 10.1016/0040-4039(95)01190-S  1
1995 Tzalis D, Tor Y, Salvatorre F, Jay Siegel S. Simple one-step synthesis of 3-bromo- and 3,8-dibromo-1,10-phenanthroline: Fundamental building blocks in the design of metal chelates Tetrahedron Letters. 36: 3489-3490. DOI: 10.1016/0040-4039(95)00572-T  1
1993 Tor Y, Dervan PB. Site-specific enzymatic incorporation of an unnatural base, n6-(6-ammohexyl)isoguanosine, into RNA Journal of the American Chemical Society. 115: 4461-4467.  1
1992 Paterlini MG, Freedman TB, Nafie LA, Tor Y, Shanzer A. Vibrational CD studies of interchain hydrogen-bonded tripodal peptides. Biopolymers. 32: 765-82. PMID 1391630 DOI: 10.1002/bip.360320706  1
1992 Dayan I, Tor Y, Libman J, Shanzer A. Li+ and Ca2+ ions as complementary regulatory elements for the formation of propeller-like conformations Journal of Organic Chemistry. 57: 6060-6063.  1
1992 Tor Y, Libman J, Shanzer A, Felder CE, Lifson S. Chiral siderophore analogs: Enterobactin Journal of the American Chemical Society. 114: 6661-6671.  1
1992 Tor Y, Libman J, Shanzer A, Felder CE, Lifson S. Tripodal peptides with chiral conformations stabilized by interstrand hydrogen bonds Journal of the American Chemical Society. 114: 6653-6661.  1
1991 Steinberg S, Tor Y, Sabatani E, Rubinstein I. Ion-selective monolayer membranes based upon self-assembling tetradentate ligand monolayers on gold electrodes. 2. Effect of applied potential on ion binding Journal of the American Chemical Society. 113: 5176-5182.  1
1991 Goldfarb D, Fauth JM, Tor Y, Shanzer A. Study of Cu(II) Binding to Chiral Tripodal Ligands by Electron Spin Echo Spectroscopy Journal of the American Chemical Society. 113: 1941-1948.  1
1990 Shanzer A, Yakirevitch P, Gottlieb H, Tor Y, Libman J. Polytopic chiral binders Pure and Applied Chemistry. 62: 1111-1114. DOI: 10.1351/pac199062061111  1
1990 Tor Y, Shanzer A, Scherz A. Geometries of non-transition-metal complexes of a novel chiral β-keto amide tripodal ligand elucidated from the optical transitions to excitonic states Inorganic Chemistry. 29: 4096-4099.  1
1989 Shanzer A, Libman J, Lazar R, Tor Y. Receptor mapping with artificial siderophores Pure and Applied Chemistry. 61: 1529-1534. DOI: 10.1351/pac198961091529  1
1989 Paterlini MG, Freedman TB, Nafie LA, Tor Y, Shanzer A. Vibrational circular dichroism studies of interchain hydrogen bonding in tripodal peptide molecules Proceedings of Spie - the International Society For Optical Engineering. 1145: 150-151. DOI: 10.1117/12.969400  1
1989 Rubinstein I, Steinberg S, Tor Y, Shanzer A, Sagiv J. Selective action of artificial membranes [11] Nature. 337: 217.  1
1988 Shanzer A, Libman J, Lazar R, Tor Y, Emery T. Synthetic ferrichrome analogues with growth promotion activity for Arthrobacter flavescens. Biochemical and Biophysical Research Communications. 157: 389-94. PMID 3196346 DOI: 10.1016/S0006-291X(88)80059-7  1
1988 Libman J, Tor Y, Shanzer A. From ring structures to helices Journal of Coordination Chemistry. 18: 241-244. DOI: 10.1080/00958978808080720  1
1988 Rubinstein I, Steinberg S, Tor Y, Shanzer A, Sagiv J. Ionic recognition and selective response in self-assembling monolayer membranes on electrodes Nature. 332: 426-429.  1
1987 Tor Y, Libman J, Shanzer A, Felder CE, Lifson S. A trispeptide circularly organized through inter-chain hydrogen bonds Journal of the Chemical Society, Chemical Communications. 749-750. DOI: 10.1039/C39870000749  1
1987 Tor Y, Libman J, Shanzer A. Biomimetic ferric ion carriers. Chiral ferrichrome analogues Journal of the American Chemical Society. 109: 6518-6519.  1
1987 Libman J, Tor Y, Shanzer A. Helical ferric ion binders Journal of the American Chemical Society. 109: 5880-5881.  1
1987 Tor Y, Libman J, Shanzer A, Lifson S. Biomimetic ferric ion carriers. A chiral analogue of enterobactin Journal of the American Chemical Society. 109: 6517-6518.  1
1985 Tor Y, Libman J, Frolow F, Gottlieb HE, Lazar R, Shanzer A. Template synthesis, structure, and binding properties of macrocyclic S,O-lactones Journal of Organic Chemistry. 50: 5476-5480.  1
1984 Lerman O, Tor Y, Hebel D, Rozen S. A novel electrophilic fluorination of activated aromatic rings using acetyl hypofluorite, suitable also for introducing 18F into benzene nuclei Journal of Organic Chemistry. 49: 806-813.  1
1981 Lerman O, Tor Y, Rozen S. Acetyl hypofluorite as a taming carrier of elemental fluorine for novel electrophilic fluorination of activated aromatic rings Journal of Organic Chemistry. 46: 4629-4631.  1
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