Year |
Citation |
Score |
2011 |
Zhao J, Dundas J, Kachalo S, Ouyang Z, Liang J. Accuracy of functional surfaces on comparatively modeled protein structures. Journal of Structural and Functional Genomics. 12: 97-107. PMID 21541664 DOI: 10.1007/S10969-011-9109-Z |
0.658 |
|
2011 |
Cui J, Hao J, Ulanovskaya OA, Dundas J, Liang J, Kozmin SA. Creation and manipulation of common functional groups en route to a skeletally diverse chemical library. Proceedings of the National Academy of Sciences of the United States of America. 108: 6763-8. PMID 21383124 DOI: 10.1073/Pnas.1015253108 |
0.405 |
|
2011 |
Dundas J, Adamian L, Liang J. Structural signatures of enzyme binding pockets from order-independent surface alignment: a study of metalloendopeptidase and NAD binding proteins. Journal of Molecular Biology. 406: 713-29. PMID 21145898 DOI: 10.1016/J.Jmb.2010.12.005 |
0.642 |
|
2009 |
Zhang J, Dundas J, Lin M, Chen R, Wang W, Liang J. Prediction of geometrically feasible three-dimensional structures of pseudoknotted RNA through free energy estimation. Rna (New York, N.Y.). 15: 2248-63. PMID 19864433 DOI: 10.1261/Rna.1723609 |
0.473 |
|
2009 |
Tseng YY, Dundas J, Liang J. Predicting protein function and binding profile via matching of local evolutionary and geometric surface patterns. Journal of Molecular Biology. 387: 451-64. PMID 19154742 DOI: 10.1016/J.Jmb.2008.12.072 |
0.715 |
|
2008 |
Liang J, Tseng YY, Dundas J, Binkowski TA, Joachimiak A, Ouyang Z, Adamian L. Chapter 4. Predicting and characterizing protein functions through matching geometric and evolutionary patterns of binding surfaces. Advances in Protein Chemistry and Structural Biology. 75: 107-41. PMID 20731991 DOI: 10.1016/S0065-3233(07)75004-0 |
0.557 |
|
2007 |
Dundas J, Binkowski TA, DasGupta B, Liang J. Topology independent protein structural alignment. Bmc Bioinformatics. 8: 388. PMID 17937816 DOI: 10.1186/1471-2105-8-388 |
0.633 |
|
2006 |
Dundas J, Ouyang Z, Tseng J, Binkowski A, Turpaz Y, Liang J. CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues. Nucleic Acids Research. 34: W116-8. PMID 16844972 DOI: 10.1093/Nar/Gkl282 |
0.605 |
|
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