Alaattin Kaya, Ph.D. - Publications

2013 Biochemistry The University of Nebraska - Lincoln, Lincoln, NE 
Biochemistry, Genetics

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zhou X, Dou Q, Fan G, Zhang Q, Sanderford M, Kaya A, Johnson J, Karlsson EK, Tian X, Mikhalchenko A, Kumar S, Seluanov A, Zhang ZD, Gorbunova V, Liu X, et al. Beaver and Naked Mole Rat Genomes Reveal Common Paths to Longevity. Cell Reports. 32: 107949. PMID 32726638 DOI: 10.1016/j.celrep.2020.107949  0.6
2020 Kaya A, Mariotti M, Tyshkovskiy A, Zhou X, Hulke ML, Ma S, Gerashchenko MV, Koren A, Gladyshev VN. Molecular signatures of aneuploidy-driven adaptive evolution. Nature Communications. 11: 588. PMID 32001709 DOI: 10.1038/s41467-019-13669-2  0.6
2019 Choi KM, Kim S, Kim S, Lee HM, Kaya A, Chun BH, Lee YK, Park TS, Lee CK, Eyun SI, Lee BC. Sulfate assimilation regulates hydrogen sulfide production independent of lifespan and reactive oxygen species under methionine restriction condition in yeast. Aging. PMID 31254461 DOI: 10.18632/aging.102050  0.4
2018 Zhou X, Guang X, Sun D, Xu S, Li M, Seim I, Jie W, Yang L, Zhu Q, Xu J, Gao Q, Kaya A, Dou Q, Chen B, Ren W, et al. Population genomics of finless porpoises reveal an incipient cetacean species adapted to freshwater. Nature Communications. 9: 1276. PMID 29636446 DOI: 10.1038/s41467-018-03722-x  0.6
2017 Kaya A, Mariotti M, Gladyshev VN. Cytochrome c peroxidase facilitates the beneficial use of H2O2 in prokaryotes. Proceedings of the National Academy of Sciences of the United States of America. PMID 28765365 DOI: 10.1073/pnas.1710943114  0.6
2017 Lee SG, Kaya A, Avanesov AS, Podolskiy DI, Song EJ, Go DM, Jin GD, Hwang JY, Kim EB, Kim DY, Gladyshev VN. Age-associated molecular changes are deleterious and may modulate life span through diet. Science Advances. 3: e1601833. PMID 28232953 DOI: 10.1126/sciadv.1601833  0.6
2015 Kaya A, Ma S, Wasko B, Lee M, Kaeberlein M, Gladyshev VN. Defining Molecular Basis for Longevity Traits in Natural Yeast Isolates. Npj Aging and Mechanisms of Disease. 1. PMID 27030810 DOI: 10.1038/npjamd.2015.1  0.6
2015 Lee BC, Kaya A, Gladyshev VN. Methionine restriction and life-span control. Annals of the New York Academy of Sciences. PMID 26663138 DOI: 10.1111/nyas.12973  0.6
2015 Kaya A, Gerashchenko MV, Seim I, Labarre J, Toledano MB, Gladyshev VN. Adaptive aneuploidy protects against thiol peroxidase deficiency by increasing respiration via key mitochondrial proteins. Proceedings of the National Academy of Sciences of the United States of America. 112: 10685-90. PMID 26261310 DOI: 10.1073/pnas.1505315112  0.6
2015 Kaya A, Lee BC, Gladyshev VN. Regulation of Protein Function by Reversible Methionine Oxidation and the Role of Selenoprotein MsrB1. Antioxidants & Redox Signaling. 23: 814-22. PMID 26181576 DOI: 10.1089/ars.2015.6385  0.6
2015 Kaya A, Lobanov AV, Gladyshev VN. Evidence that mutation accumulation does not cause aging in Saccharomyces cerevisiae. Aging Cell. 14: 366-71. PMID 25702753 DOI: 10.1111/acel.12290  0.6
2015 Kaya A, Lobanov AV, Gladyshev VN. Evidence that mutation accumulation does not cause aging in Saccharomyces cerevisiae Aging Cell. 14: 366-371. DOI: 10.1111/acel.12290  0.6
2014 Kaya A, Lobanov AV, Gerashchenko MV, Koren A, Fomenko DE, Koc A, Gladyshev VN. Thiol peroxidase deficiency leads to increased mutational load and decreased fitness in Saccharomyces cerevisiae. Genetics. 198: 905-17. PMID 25173844 DOI: 10.1534/genetics.114.169243  0.6
2014 Lee BC, Kaya A, Ma S, Kim G, Gerashchenko MV, Yim SH, Hu Z, Harshman LG, Gladyshev VN. Methionine restriction extends lifespan of Drosophila melanogaster under conditions of low amino-acid status. Nature Communications. 5: 3592. PMID 24710037 DOI: 10.1038/ncomms4592  0.6
2014 Bozdag GO, Kaya A, Koc A, Noll GA, Prüfer D, Karakaya HC. Characterization of a cDNA from Beta maritima that confers nickel tolerance in yeast. Gene. 538: 251-7. PMID 24487090 DOI: 10.1016/j.gene.2014.01.052  0.6
2014 Labunskyy VM, Gerashchenko MV, Delaney JR, Kaya A, Kennedy BK, Kaeberlein M, Gladyshev VN. Lifespan extension conferred by endoplasmic reticulum secretory pathway deficiency requires induction of the unfolded protein response. Plos Genetics. 10: e1004019. PMID 24391512 DOI: 10.1371/journal.pgen.1004019  0.6
2013 Lee BC, Péterfi Z, Hoffmann FW, Moore RE, Kaya A, Avanesov A, Tarrago L, Zhou Y, Weerapana E, Fomenko DE, Hoffmann PR, Gladyshev VN. MsrB1 and MICALs regulate actin assembly and macrophage function via reversible stereoselective methionine oxidation. Molecular Cell. 51: 397-404. PMID 23911929 DOI: 10.1016/j.molcel.2013.06.019  0.6
2013 Le DT, Tarrago L, Watanabe Y, Kaya A, Lee BC, Tran U, Nishiyama R, Fomenko DE, Gladyshev VN, Tran LS. Diversity of plant methionine sulfoxide reductases B and evolution of a form specific for free methionine sulfoxide. Plos One. 8: e65637. PMID 23776515 DOI: 10.1371/journal.pone.0065637  0.6
2012 Liang X, Kaya A, Zhang Y, Le DT, Hua D, Gladyshev VN. Characterization of methionine oxidation and methionine sulfoxide reduction using methionine-rich cysteine-free proteins. Bmc Biochemistry. 13: 21. PMID 23088625 DOI: 10.1186/1471-2091-13-21  0.6
2012 Tarrago L, Kaya A, Weerapana E, Marino SM, Gladyshev VN. Methionine sulfoxide reductases preferentially reduce unfolded oxidized proteins and protect cells from oxidative protein unfolding. The Journal of Biological Chemistry. 287: 24448-59. PMID 22628550 DOI: 10.1074/jbc.M112.374520  0.6
2011 Uluisik I, Kaya A, Fomenko DE, Karakaya HC, Carlson BA, Gladyshev VN, Koc A. Boron stress activates the general amino acid control mechanism and inhibits protein synthesis. Plos One. 6: e27772. PMID 22114689 DOI: 10.1371/journal.pone.0027772  0.6
2011 Lee BC, Lobanov AV, Marino SM, Kaya A, Seravalli J, Hatfield DL, Gladyshev VN. A 4-selenocysteine, 2-selenocysteine insertion sequence (SECIS) element methionine sulfoxide reductase from Metridium senile reveals a non-catalytic function of selenocysteines. The Journal of Biological Chemistry. 286: 18747-55. PMID 21393246 DOI: 10.1074/jbc.M111.229807  0.6
2011 Fomenko DE, Koc A, Agisheva N, Jacobsen M, Kaya A, Malinouski M, Rutherford JC, Siu KL, Jin DY, Winge DR, Gladyshev VN. Thiol peroxidases mediate specific genome-wide regulation of gene expression in response to hydrogen peroxide. Proceedings of the National Academy of Sciences of the United States of America. 108: 2729-34. PMID 21282621 DOI: 10.1073/pnas.1010721108  0.6
2011 Uluisik I, Kaya A, Unlu ES, Avsar K, Karakaya HC, Yalcin T, Koc A. Genome-wide identification of genes that play a role in boron stress response in yeast. Genomics. 97: 106-11. PMID 21035538 DOI: 10.1016/j.ygeno.2010.10.006  0.6
2010 Kaya A, Koc A, Lee BC, Fomenko DE, Rederstorff M, Krol A, Lescure A, Gladyshev VN. Compartmentalization and regulation of mitochondrial function by methionine sulfoxide reductases in yeast. Biochemistry. 49: 8618-25. PMID 20799725 DOI: 10.1021/bi100908v  0.6
2010 Liang X, Fomenko DE, Hua D, Kaya A, Gladyshev VN. Diversity of protein and mRNA forms of mammalian methionine sulfoxide reductase B1 due to intronization and protein processing. Plos One. 5: e11497. PMID 20634897 DOI: 10.1371/journal.pone.0011497  0.6
2009 Kaya A, Karakaya HC, Fomenko DE, Gladyshev VN, Koc A. Identification of a novel system for boron transport: Atr1 is a main boron exporter in yeast. Molecular and Cellular Biology. 29: 3665-74. PMID 19414602 DOI: 10.1128/MCB.01646-08  0.6
2009 Le DT, Lee BC, Marino SM, Zhang Y, Fomenko DE, Kaya A, Hacioglu E, Kwak GH, Koc A, Kim HY, Gladyshev VN. Functional analysis of free methionine-R-sulfoxide reductase from Saccharomyces cerevisiae. The Journal of Biological Chemistry. 284: 4354-64. PMID 19049972 DOI: 10.1074/jbc.M805891200  0.6
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