Omer Ali A. Bayraktar - Publications

Affiliations: 
University of California, San Francisco, San Francisco, CA 
Area:
Neural stem cells

20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhang B, He P, Lawrence JEG, Wang S, Tuck E, Williams BA, Roberts K, Kleshchevnikov V, Mamanova L, Bolt L, Polanski K, Li T, Elmentaite R, Fasouli ES, Prete M, ... Bayraktar OA, et al. A human embryonic limb cell atlas resolved in space and time. Nature. PMID 38057666 DOI: 10.1038/s41586-023-06806-x  0.779
2023 Arutyunyan A, Roberts K, Troulé K, Wong FCK, Sheridan MA, Kats I, Garcia-Alonso L, Velten B, Hoo R, Ruiz-Morales ER, Sancho-Serra C, Shilts J, Handfield LF, Marconato L, Tuck E, ... ... Bayraktar OA, et al. Spatial multiomics map of trophoblast development in early pregnancy. Nature. PMID 36991123 DOI: 10.1038/s41586-023-05869-0  0.74
2022 Madissoon E, Oliver AJ, Kleshchevnikov V, Wilbrey-Clark A, Polanski K, Richoz N, Ribeiro Orsi A, Mamanova L, Bolt L, Elmentaite R, Pett JP, Huang N, Xu C, He P, Dabrowska M, ... ... Bayraktar OA, et al. A spatially resolved atlas of the human lung characterizes a gland-associated immune niche. Nature Genetics. PMID 36543915 DOI: 10.1038/s41588-022-01243-4  0.781
2022 Lomakin A, Svedlund J, Strell C, Gataric M, Shmatko A, Rukhovich G, Park JS, Ju YS, Dentro S, Kleshchevnikov V, Vaskivskyi V, Li T, Bayraktar OA, Pinder S, Richardson AL, et al. Spatial genomics maps the structure, nature and evolution of cancer clones. Nature. PMID 36352222 DOI: 10.1038/s41586-022-05425-2  0.757
2022 Garcia-Alonso L, Lorenzi V, Mazzeo CI, Alves-Lopes JP, Roberts K, Sancho-Serra C, Engelbert J, Marečková M, Gruhn WH, Botting RA, Li T, Crespo B, van Dongen S, Kiselev VY, Prigmore E, ... ... Bayraktar OA, et al. Single-cell roadmap of human gonadal development. Nature. PMID 35794482 DOI: 10.1038/s41586-022-04918-4  0.773
2022 Kleshchevnikov V, Shmatko A, Dann E, Aivazidis A, King HW, Li T, Elmentaite R, Lomakin A, Kedlian V, Gayoso A, Jain MS, Park JS, Ramona L, Tuck E, Arutyunyan A, ... ... Bayraktar OA, et al. Cell2location maps fine-grained cell types in spatial transcriptomics. Nature Biotechnology. PMID 35027729 DOI: 10.1038/s41587-021-01139-4  0.739
2021 Elmentaite R, Kumasaka N, Roberts K, Fleming A, Dann E, King HW, Kleshchevnikov V, Dabrowska M, Pritchard S, Bolt L, Vieira SF, Mamanova L, Huang N, Perrone F, Goh Kai'En I, ... ... Bayraktar OA, et al. Cells of the human intestinal tract mapped across space and time. Nature. 597: 250-255. PMID 34497389 DOI: 10.1038/s41586-021-03852-1  0.776
2021 Kildisiute G, Kholosy WM, Young MD, Roberts K, Elmentaite R, van Hooff SR, Pacyna CN, Khabirova E, Piapi A, Thevanesan C, Bugallo-Blanco E, Burke C, Mamanova L, Keller KM, Langenberg-Ververgaert KPS, ... ... Bayraktar O, et al. Tumor to normal single-cell mRNA comparisons reveal a pan-neuroblastoma cancer cell. Science Advances. 7. PMID 33547074 DOI: 10.1126/sciadv.abd3311  0.746
2020 Elmentaite R, Ross ADB, Roberts K, James KR, Ortmann D, Gomes T, Nayak K, Tuck L, Pritchard S, Bayraktar OA, Heuschkel R, Vallier L, Teichmann SA, Zilbauer M. Single-Cell Sequencing of Developing Human Gut Reveals Transcriptional Links to Childhood Crohn's Disease. Developmental Cell. PMID 33290721 DOI: 10.1016/j.devcel.2020.11.010  0.785
2020 Litviňuková M, Talavera-López C, Maatz H, Reichart D, Worth CL, Lindberg EL, Kanda M, Polanski K, Heinig M, Lee M, Nadelmann ER, Roberts K, Tuck L, Fasouli ES, DeLaughter DM, ... ... Bayraktar O, et al. Cells of the adult human heart. Nature. PMID 32971526 DOI: 10.1038/s41586-020-2797-4  0.736
2020 Roberts K, Bayraktar OA. Automation of Multiplexed RNAscope Single-Molecule Fluorescent In Situ Hybridization and Immunohistochemistry for Spatial Tissue Mapping. Methods in Molecular Biology (Clifton, N.J.). 2148: 229-244. PMID 32394386 DOI: 10.1007/978-1-0716-0623-0_15  0.722
2020 Bayraktar OA, Bartels T, Holmqvist S, Kleshchevnikov V, Martirosyan A, Polioudakis D, Ben Haim L, Young AMH, Batiuk MY, Prakash K, Brown A, Roberts K, Paredes MF, Kawaguchi R, Stockley JH, et al. Astrocyte layers in the mammalian cerebral cortex revealed by a single-cell in situ transcriptomic map. Nature Neuroscience. PMID 32203496 DOI: 10.1038/S41593-020-0602-1  0.7
2020 Park JE, Botting RA, Domínguez Conde C, Popescu DM, Lavaert M, Kunz DJ, Goh I, Stephenson E, Ragazzini R, Tuck E, Wilbrey-Clark A, Roberts K, Kedlian VR, Ferdinand JR, He X, ... ... Bayraktar OA, et al. A cell atlas of human thymic development defines T cell repertoire formation. Science (New York, N.Y.). 367. PMID 32079746 DOI: 10.1126/Science.Aay3224  0.757
2019 Schirmer L, Velmeshev D, Holmqvist S, Kaufmann M, Werneburg S, Jung D, Vistnes S, Stockley JH, Young A, Steindel M, Tung B, Goyal N, Bhaduri A, Mayer S, Engler JB, ... Bayraktar OA, et al. Neuronal vulnerability and multilineage diversity in multiple sclerosis. Nature. PMID 31316211 DOI: 10.1038/S41586-019-1404-Z  0.754
2017 Nguyen V, Sabeur K, Maltepe E, Ameri K, Bayraktar O, Rowitch DH. Sonic Hedgehog Agonist Protects Against Complex Neonatal Cerebellar Injury. Cerebellum (London, England). PMID 29134361 DOI: 10.1007/S12311-017-0895-0  0.525
2015 Farnsworth DR, Bayraktar OA, Doe CQ. Aging Neural Progenitors Lose Competence to Respond to Mitogenic Notch Signaling. Current Biology : Cb. PMID 26585279 DOI: 10.1016/J.Cub.2015.10.027  0.579
2015 Bayraktar OA, Fuentealba LC, Alvarez-Buylla A, Rowitch DH. Astrocyte development and heterogeneity. Cold Spring Harbor Perspectives in Biology. 7: a020362. PMID 25414368 DOI: 10.1101/Cshperspect.A020362  0.521
2013 Bayraktar OA, Doe CQ. Combinatorial temporal patterning in progenitors expands neural diversity. Nature. 498: 449-55. PMID 23783519 DOI: 10.1038/Nature12266  0.567
2012 Carney TD, Miller MR, Robinson KJ, Bayraktar OA, Osterhout JA, Doe CQ. Functional genomics identifies neural stem cell sub-type expression profiles and genes regulating neuroblast homeostasis. Developmental Biology. 361: 137-46. PMID 22061480 DOI: 10.1016/J.Ydbio.2011.10.020  0.746
2010 Bayraktar OA, Boone JQ, Drummond ML, Doe CQ. Drosophila type II neuroblast lineages keep Prospero levels low to generate large clones that contribute to the adult brain central complex. Neural Development. 5: 26. PMID 20920301 DOI: 10.1186/1749-8104-5-26  0.571
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