Karen T. Dixon, Ph.D. - Related publications

Affiliations: 
2004 University of Alabama, Birmingham, Birmingham, AL, United States 
Area:
Biochemistry, Molecular Biology, Pathology
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Pinheiro H, Pimentel MR, Sequeira C, Oliveira LM, Pezzarossa A, Roman W, Gomes ER. mRNA distribution in skeletal muscle is associated with mRNA size. Journal of Cell Science. 134. PMID 34297126 DOI: 10.1242/jcs.256388   
2021 Karousis ED, Gypas F, Zavolan M, Mühlemann O. Nanopore sequencing reveals endogenous NMD-targeted isoforms in human cells. Genome Biology. 22: 223. PMID 34389041 DOI: 10.1186/s13059-021-02439-3   
2021 Rengaraj P, Obrdlík A, Vukić D, Varadarajan NM, Keegan LP, Vaňáčová Š, O'Connell MA. Interplays of different types of epitranscriptomic mRNA modifications. Rna Biology. 1-12. PMID 34424827 DOI: 10.1080/15476286.2021.1969113   
2021 Li M, Li S, Huang Y, Chen H, Zhang S, Zhang Z, Wu W, Zeng X, Zhou B, Li B. Secreted Expression of mRNA-Encoded Truncated ACE2 Variants for SARS-CoV-2 via Lipid-Like Nanoassemblies. Advanced Materials (Deerfield Beach, Fla.). e2101707. PMID 34278613 DOI: 10.1002/adma.202101707   
2021 Li M, Li S, Huang Y, Chen H, Zhang S, Zhang Z, Wu W, Zeng X, Zhou B, Li B. Secreted Expression of mRNA-Encoded Truncated ACE2 Variants for SARS-CoV-2 via Lipid-Like Nanoassemblies. Advanced Materials (Deerfield Beach, Fla.). e2101707. PMID 34278613 DOI: 10.1002/adma.202101707   
2021 Jansova D, Aleshkina D, Jindrova A, Iyyappan R, Qin A, Fan G, Susor A. Single molecule RNA localization and translation in the mammalian oocyte and embryo. Journal of Molecular Biology. 167166. PMID 34293340 DOI: 10.1016/j.jmb.2021.167166   
2021 Geis L, Boudriot FF, Wagner C. Connexin mRNA distribution in adult mouse kidneys. Pflugers Archiv : European Journal of Physiology. PMID 34365513 DOI: 10.1007/s00424-021-02608-0   
2021 Zeng Y, Huang T, Zuo W, Wang D, Xie Y, Wang X, Xiao Z, Chen Z, Liu Q, Liu N, Xiao Y. Integrated analysis of mA mRNA methylation in rats with monocrotaline-induced pulmonary arterial hypertension. Aging. 13. PMID 34310344 DOI: 10.18632/aging.203230   
2021 Zeng Y, Huang T, Zuo W, Wang D, Xie Y, Wang X, Xiao Z, Chen Z, Liu Q, Liu N, Xiao Y. Integrated analysis of mA mRNA methylation in rats with monocrotaline-induced pulmonary arterial hypertension. Aging. 13. PMID 34310344 DOI: 10.18632/aging.203230   
2021 Fukao A, Tomohiro T, Fujiwara T. Translation Initiation Regulated by RNA-Binding Protein in Mammals: The Modulation of Translation Initiation Complex by Trans-Acting Factors. Cells. 10. PMID 34359885 DOI: 10.3390/cells10071711   
2021 Tao W, Tian G, Xu S, Li J, Zhang Z, Li J. NAT10 as a potential prognostic biomarker and therapeutic target for HNSCC. Cancer Cell International. 21: 413. PMID 34362389 DOI: 10.1186/s12935-021-02124-2   
2021 Mathur L, Jung S, Jang C, Lee G. Quantitative analysis of mA RNA modification by LC-MS. Star Protocols. 2: 100724. PMID 34401789 DOI: 10.1016/j.xpro.2021.100724   
2021 Yang T, Poenisch M, Khanal R, Hu Q, Dai Z, Li R, Song G, Yuan Q, Yao Q, Shen X, Taubert R, Engel B, Jaeckel E, Vogel A, Falk CS, et al. Therapeutic HNF4A mRNA attenuates liver fibrosis in a preclinical model. Journal of Hepatology. PMID 34453962 DOI: 10.1016/j.jhep.2021.08.011   
2021 Chen H, Miao X, Xu J, Pu L, Li L, Han Y, Mao F, Ma Y. Alterations of mRNA and lncRNA profiles associated with the extracellular matrix and spermatogenesis in goats. Animal Bioscience. PMID 34530511 DOI: 10.5713/ab.21.0259   
2021 Akiyama T, Yamamoto T. Regulation of Early Lymphocyte Development mRNA Decay Catalyzed by the CCR4-NOT Complex. Frontiers in Immunology. 12: 715675. PMID 34349771 DOI: 10.3389/fimmu.2021.715675   
2021 Cao H, Sethumadhavan K, Wu X, Zeng X. Cottonseed-derived gossypol and ethanol extracts differentially regulate cell viability and VEGF gene expression in mouse macrophages. Scientific Reports. 11: 15700. PMID 34344975 DOI: 10.1038/s41598-021-95248-4   
2021 Okamoto M, Shimogishi M, Nakamura A, Suga Y, Sugawara K, Sato M, Nishi R, Fujisawa A, Yamamoto Y, Kashiba M. Differentiation of THP-1 monocytes to macrophages increased mitochondrial DNA copy number but did not increase expression of mitochondrial respiratory proteins or mitochondrial transcription factor A. Archives of Biochemistry and Biophysics. 710: 108988. PMID 34274337 DOI: 10.1016/j.abb.2021.108988   
2021 Zhao X, Feng Z, Risher N, Mollin A, Sheedy J, Ling KKY, Narasimhan J, Dakka A, Baird JD, Ratni H, Lutz C, Chen K, Naryshkin N, Ko CP, Welch E, et al. SMN protein is required throughout life to prevent spinal muscular atrophy disease progression. Human Molecular Genetics. PMID 34368854 DOI: 10.1093/hmg/ddab220   
2021 Yang R, Duan C, Guo Y, Ma Y, Niu N, Zhang Y, Liu Y. Sequence analysis and mRNA expression of prolactin receptor gene isoforms in different tissues of sheep during lactation and the post-weaning period. Peerj. 9: e11868. PMID 34395094 DOI: 10.7717/peerj.11868   
2021 Jia Y, Han J, Wang H, Hong W, Wang H, Zhang M, Li Z. Ultrasensitive quantification of multiplexed mRNA variants splice-junction anchored DNA probes and SplintR ligase-initiated PCR. Chemical Communications (Cambridge, England). PMID 34498616 DOI: 10.1039/d1cc03033g   
2021 Shuai Q, Zhu F, Zhao M, Yan Y. mRNA delivery via non-viral carriers for biomedical applications. International Journal of Pharmaceutics. 121020. PMID 34416327 DOI: 10.1016/j.ijpharm.2021.121020   
2021 Shen ZJ, Han YC, Nie MW, Wang YN, Xiang RL, Xie HZ. Genome-wide identification of altered RNA mA profiles in vascular tissue of septic rats. Aging. 13. PMID 34507301 DOI: 10.18632/aging.203506   
2021 Han YC, Xie HZ, Lu B, Xiang RL, Zhang HP, Li JY, Zhang SY. Lipopolysaccharide Alters the m6A Epitranscriptomic Tagging of RNAs in Cardiac Tissue. Frontiers in Molecular Biosciences. 8: 670160. PMID 34395520 DOI: 10.3389/fmolb.2021.670160   
2021 Budkina K, El Hage K, Clément MJ, Desforges B, Bouhss A, Joshi V, Maucuer A, Hamon L, Ovchinnikov LP, Lyabin DN, Pastré D. YB-1 unwinds mRNA secondary structures in vitro and negatively regulates stress granule assembly in HeLa cells. Nucleic Acids Research. PMID 34469566 DOI: 10.1093/nar/gkab748   
2021 Sershen H, Guidotti A, Auta J, Drnevich J, Grayson DR, Veldic M, Meyers J, Youseff M, Zhubi A, Faurot K, Wu R, Zhao J, Jin H, Lajtha A, Davis JM, et al. Gene Expression Of Methylation Cycle And Related Genes In Lymphocytes And Brain Of Patients With Schizophrenia And Non-Psychotic Controls. Biomarkers in Neuropsychiatry. 5. PMID 34368786 DOI: 10.1016/j.bionps.2021.100038   
2021 Dharmalingam P, Mahalingam R, Yalamanchili HK, Weng T, Karmouty-Quintana H, Guha A, A Thandavarayan R. Emerging roles of alternative cleavage and polyadenylation (APA) in human disease. Journal of Cellular Physiology. PMID 34378793 DOI: 10.1002/jcp.30549   
2021 Lombardi S, Leo G, Merlin S, Follenzi A, McVey JH, Maestri I, Bernardi F, Pinotti M, Balestra D. Dissection of pleiotropic effects of variants in and adjacent to F8 exon 19 and rescue of mRNA splicing and protein function. American Journal of Human Genetics. PMID 34242570 DOI: 10.1016/j.ajhg.2021.06.012   
2021 Bilhar APM, Bortolini MAT, Sé AB, Feitosa SM, Zanoteli E, Castro RA. Long-term effects of muscle-derived stem cell therapy on the regeneration of the urethra of female rats. International Urogynecology Journal. PMID 33655365 DOI: 10.1007/s00192-021-04708-y   
2021 Wang S, Wang E, Chen Q, Yang Y, Xu L, Zhang X, Wu R, Hu X, Wu Z. Uncovering Potential lncRNAs and mRNAs in the Progression From Acute Myocardial Infarction to Myocardial Fibrosis to Heart Failure. Frontiers in Cardiovascular Medicine. 8: 664044. PMID 34336943 DOI: 10.3389/fcvm.2021.664044   
2021 Song X, Zhang JN, Zhao DW, Zhai YF, Lu Q, Qi MY, Lu MH, Deng SL, Han HB, Yang XQ, Yao YC. Molecular cloning, expression, and functional features of IGF1 splice variants in sheep. Endocrine Connections. PMID 34319906 DOI: 10.1530/EC-21-0181   
2021 Song X, Zhang JN, Zhao DW, Zhai YF, Lu Q, Qi MY, Lu MH, Deng SL, Han HB, Yang XQ, Yao YC. Molecular cloning, expression, and functional features of IGF1 splice variants in sheep. Endocrine Connections. PMID 34319906 DOI: 10.1530/EC-21-0181   
2021 Sun J, Ping Y, Huang J, Zeng B, Ji P, Li D. N6-Methyladenosine-Regulated mRNAs: Potential Prognostic Biomarkers for Patients With Lung Adenocarcinoma. Frontiers in Cell and Developmental Biology. 9: 705962. PMID 34422827 DOI: 10.3389/fcell.2021.705962   
2021 Shimada K, Shimizu M, Ohtani Y, Roy RR, Murakami S, Ochiai T, Hasegawa H. Mammaglobin protein localization and gene expression in the salivary glands. Journal of Oral Science. PMID 34408112 DOI: 10.2334/josnusd.21-0180   
2021 Sanjuan-Ruiz I, Govea-Perez N, McAlonis-Downes M, Dieterle S, Megat S, Dirrig-Grosch S, Picchiarelli G, Piol D, Zhu Q, Myers B, Lee CZ, Cleveland DW, Lagier-Tourenne C, Cruz SD, Dupuis L. Wild-type FUS corrects ALS-like disease induced by cytoplasmic mutant FUS through autoregulation. Molecular Neurodegeneration. 16: 61. PMID 34488813 DOI: 10.1186/s13024-021-00477-w   
2021 Li Y, Aksenova V, Tingey M, Yu J, Ma P, Arnaoutov A, Chen S, Dasso M, Yang W. Distinct roles of nuclear basket proteins in directing the passage of mRNA through the nuclear pore. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34504007 DOI: 10.1073/pnas.2015621118   
2021 Gong Y, He J, Li B, Xiao Y, Zeng Q, Xu K, Duan Y, He J, Ma H. Integrated Analysis of lncRNA and mRNA in Subcutaneous Adipose Tissue of Ningxiang Pig. Biology. 10. PMID 34439958 DOI: 10.3390/biology10080726   
2021 Cho JH, Lee JW, Yoon JH, Min KW. Crosslinking Immunoprecipitation and qPCR (CLIP-qPCR) Analysis to Map Interactions of Long Noncoding RNAs with Canonical and Non-canonical RNA-Binding Proteins. Methods in Molecular Biology (Clifton, N.J.). 2372: 11-18. PMID 34417738 DOI: 10.1007/978-1-0716-1697-0_2   
2021 Hwang HJ, Park Y, Kim YK. UPF1: From mRNA Surveillance to Protein Quality Control. Biomedicines. 9. PMID 34440199 DOI: 10.3390/biomedicines9080995   
2021 Fukumura K, Yoshimoto R, Sperotto L, Kang HS, Hirose T, Inoue K, Sattler M, Mayeda A. SPF45/RBM17-dependent, but not U2AF-dependent, splicing in a distinct subset of human short introns. Nature Communications. 12: 4910. PMID 34389706 DOI: 10.1038/s41467-021-24879-y   
2021 Guan S, Darmstädter M, Xu C, Rosenecker J. In Vitro Investigations on Optimizing and Nebulization of IVT-mRNA Formulations for Potential Pulmonary-Based Alpha-1-Antitrypsin Deficiency Treatment. Pharmaceutics. 13. PMID 34452241 DOI: 10.3390/pharmaceutics13081281   
2021 Wang X, Zhang Y, Ding J, Wang F. mRNA analysis identifies deep intronic variants causing Alport syndrome and overcomes the problem of negative results of exome sequencing. Scientific Reports. 11: 18097. PMID 34508137 DOI: 10.1038/s41598-021-97414-0   
2021 Yin J, Zhou J, Chen J, Xu T, Zhang Z, Zhang H, Yuan C, Cheng X, Qin Y, Zheng B, Wang C, Yang S, Jia Z. Case Report: A Novel Variant c.2262+3A>T of the Gene Results in Intron Retention Associated With Incessant Ventricular Tachycardias. Frontiers in Medicine. 8: 659119. PMID 34422849 DOI: 10.3389/fmed.2021.659119   
2021 Haward F, Maslon MM, Yeyati PL, Bellora N, Hansen JN, Aitken S, Lawson J, von Kriegsheim A, Wachten D, Mill P, Adams IR, Caceres JF. Nucleo-cytoplasmic shuttling of splicing factor SRSF1 is required for development and cilia function. Elife. 10. PMID 34338635 DOI: 10.7554/eLife.65104   
2021 Martinez Campos C, Tsai K, Courtney DG, Bogerd HP, Holley CL, Cullen BR. Mapping of pseudouridine residues on viral and cellular transcripts using a novel antibody-based technique. Rna (New York, N.Y.). PMID 34376564 DOI: 10.1261/rna.078940.121   
2021 Wang S, Xue M, He C, Shen D, Jiang C, Zhao H, Niu D. AtMC1 associates with LSM4 to regulate plant immunity through modulating pre-mRNA splicing. Molecular Plant-Microbe Interactions : Mpmi. PMID 34515495 DOI: 10.1094/MPMI-07-21-0197-R   
2021 Wang Y, Zhu J, Xu J, Du J, Lu X. The long non-coding RNA and mRNA expression profiles in keratinocytes from patients with psoriasis vulgaris. Annals of Palliative Medicine. 10: 9206-9214. PMID 34488406 DOI: 10.21037/apm-21-2046   
2021 Di Meo A, Miller JJ, Fabros A, Brinc D, Hall V, Pinzon N, Ierullo M, Ku T, Ferreira VH, Kumar D, Pasic MD, Kulasingam V. Evaluation of Three anti-SARS-CoV-2 Serologic Immunoassays for Post-Vaccine Response. The Journal of Applied Laboratory Medicine. PMID 34342347 DOI: 10.1093/jalm/jfab087   
2021 Dominski Z, Tong L. U7 deciphered: the mechanism that forms the unusual 3' end of metazoan replication-dependent histone mRNAs. Biochemical Society Transactions. PMID 34351387 DOI: 10.1042/BST20210323   
2021 Calame DG, Bakhtiari S, Logan R, Coban-Akdemir Z, Du H, Mitani T, Fatih JM, Hunter JV, Herman I, Pehlivan D, Jhangiani SN, Person R, Schnur RE, Jin SC, Bilguvar K, et al. Biallelic loss-of-function variants in the splicing regulator NSRP1 cause a severe neurodevelopmental disorder with spastic cerebral palsy and epilepsy. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 34385670 DOI: 10.1038/s41436-021-01291-x   
2021 Neiswender H, Goldman CH, Veeranan-Karmegam R, Gonsalvez GB. Dynein light chain-dependent dimerization of Egalitarian is essential for maintaining oocyte fate in Drosophila. Developmental Biology. 478: 76-88. PMID 34181915 DOI: 10.1016/j.ydbio.2021.06.009