Erdal Toprak, Ph.D. - Publications

Affiliations: 
2007 University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
General Biophysics

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Okumus B, Landgraf D, Lai GC, Bakhsi S, Arias-Castro JC, Yildiz S, Huh D, Fernandez-Lopez R, Peterson CN, Toprak E, El Karoui M, Paulsson J. Mechanical slowing-down of cytoplasmic diffusion allows in vivo counting of proteins in individual cells. Nature Communications. 7: 11641. PMID 27189321 DOI: 10.1038/Ncomms11641  0.88
2015 Chevereau G, Dravecká M, Batur T, Guvenek A, Ayhan DH, Toprak E, Bollenbach T. Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance. Plos Biology. 13: e1002299. PMID 26581035 DOI: 10.1371/Journal.Pbio.1002299  0.88
2015 Palmer AC, Toprak E, Baym M, Kim S, Veres A, Bershtein S, Kishony R. Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes. Nature Communications. 6: 7385. PMID 26060115 DOI: 10.1038/Ncomms8385  0.88
2014 Oz T, Guvenek A, Yildiz S, Karaboga E, Tamer YT, Mumcuyan N, Ozan VB, Senturk GH, Cokol M, Yeh P, Toprak E. Strength of selection pressure is an important parameter contributing to the complexity of antibiotic resistance evolution. Molecular Biology and Evolution. 31: 2387-401. PMID 24962091 DOI: 10.1093/Molbev/Msu191  0.88
2014 Okumus B, Yildiz S, Toprak E. Fluidic and microfluidic tools for quantitative systems biology. Current Opinion in Biotechnology. 25: 30-8. PMID 24484878 DOI: 10.1016/J.Copbio.2013.08.016  0.88
2013 Toprak E, Veres A, Yildiz S, Pedraza JM, Chait R, Paulsson J, Kishony R. Building a morbidostat: an automated continuous-culture device for studying bacterial drug resistance under dynamically sustained drug inhibition. Nature Protocols. 8: 555-67. PMID 23429717 DOI: 10.1038/Nprot.Nprot.2013.021  0.88
2012 Toprak E, Veres A, Michel JB, Chait R, Hartl DL, Kishony R. Evolutionary paths to antibiotic resistance under dynamically sustained drug selection. Nature Genetics. 44: 101-5. PMID 22179135 DOI: 10.1038/Ng.1034  0.88
2010 Toprak E, Kural C, Selvin PR. Super-accuracy and super-resolution getting around the diffraction limit. Methods in Enzymology. 475: 1-26. PMID 20627151 DOI: 10.1016/S0076-6879(10)75001-1  0.88
2010 Reifenberger JG, Toprak E, Kim H, Safer D, Sweeney H, Selvin PR. Reply to Sun et al.: Myosin VI movement: Wiggly or straight? Proceedings of the National Academy of Sciences of the United States of America. 107. DOI: 10.1073/Pnas.1003092107  0.88
2009 Reifenberger JG, Toprak E, Kim H, Safer D, Sweeney HL, Selvin PR. Myosin VI undergoes a 180 degrees power stroke implying an uncoupling of the front lever arm. Proceedings of the National Academy of Sciences of the United States of America. 106: 18255-60. PMID 19828438 DOI: 10.1073/Pnas.0900005106  0.88
2009 Toprak E, Yildiz A, Hoffman MT, Rosenfeld SS, Selvin PR. Why kinesin is so processive. Proceedings of the National Academy of Sciences of the United States of America. 106: 12717-22. PMID 19617538 DOI: 10.1073/Pnas.0808396106  0.88
2007 Selvin PR, Lougheed T, Tonks Hoffman M, Park H, Balci H, Blehm BH, Toprak E. Fluorescence Imaging with One-Nanometer Accuracy (FIONA). Csh Protocols. 2007: pdb.top27. PMID 21356960 DOI: 10.1101/Pdb.Top27  0.88
2007 Selvin PR, Lougheed T, Tonks Hoffman M, Park H, Balci H, Blehm BH, Toprak E. Fluorescence Imaging with One-Nanometer Accuracy (FIONA) of Cy3-DNA under Deoxygenation Conditions. Csh Protocols. 2007: pdb.prot4868. PMID 21356956 DOI: 10.1101/Pdb.Prot4868  0.88
2007 Selvin PR, Lougheed T, Tonks Hoffman M, Park H, Balci H, Blehm BH, Toprak E. Constructing Sample Chambers for Fluorescence Imaging with One-Nanometer Accuracy (FIONA). Csh Protocols. 2007: pdb.prot4867. PMID 21356955 DOI: 10.1101/Pdb.Prot4867  0.88
2007 Selvin PR, Lougheed T, Tonks Hoffman M, Park H, Balci H, Blehm BH, Toprak E. Data Analysis Methods for Fluorescence Imaging with One-Nanometer Accuracy (FIONA). Csh Protocols. 2007: pdb.ip46. PMID 21356943 DOI: 10.1101/Pdb.Ip46  0.88
2007 Selvin PR, Lougheed T, Tonks Hoffman M, Park H, Balci H, Blehm BH, Toprak E. Equipment Setup for Fluorescence Imaging with One-Nanometer Accuracy (FIONA). Csh Protocols. 2007: pdb.ip45. PMID 21356942 DOI: 10.1101/Pdb.Ip45  0.88
2007 Park H, Toprak E, Selvin PR. Single-molecule fluorescence to study molecular motors. Quarterly Reviews of Biophysics. 40: 87-111. PMID 17666122 DOI: 10.1017/S0033583507004611  0.88
2007 Toprak E, Balci H, Blehm BH, Selvin PR. Three-dimensional particle tracking via bifocal imaging. Nano Letters. 7: 2043-5. PMID 17583964 DOI: 10.1021/Nl0709120  0.88
2007 Toprak E, Selvin PR. New fluorescent tools for watching nanometer-scale conformational changes of single molecules. Annual Review of Biophysics and Biomolecular Structure. 36: 349-69. PMID 17298239 DOI: 10.1146/Annurev.Biophys.36.040306.132700  0.88
2006 Enderlein J, Toprak E, Selvin PR. Polarization effect on position accuracy of fluorophore localization. Optics Express. 14: 8111-20. PMID 19529183 DOI: 10.1364/Oe.14.008111  0.88
2006 Toprak E, Enderlein J, Syed S, McKinney SA, Petschek RG, Ha T, Goldman YE, Selvin PR. Defocused orientation and position imaging (DOPI) of myosin V. Proceedings of the National Academy of Sciences of the United States of America. 103: 6495-9. PMID 16614073 DOI: 10.1073/Pnas.0507134103  0.88
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