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Anindya Dutta - Publications

Affiliations: 
2003 Harvard University, Cambridge, MA, United States 
 2003- Biochemistry and Molecular Genetics University of Virginia School of Medicine, Charlottesville, VA, United States 
Area:
Biochemistry
Website:
https://med.virginia.edu/faculty/faculty-listing/ad8q/
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Year Citation  Score
2020 Kumar P, Kiran S, Saha S, Su Z, Paulsen T, Chatrath A, Shibata Y, Shibata E, Dutta A. ATAC-seq identifies thousands of extrachromosomal circular DNA in cancer and cell lines. Science Advances. 6: eaba2489. PMID 32440553 DOI: 10.1126/Sciadv.Aba2489  0.64
2019 Paulsen T, Shibata Y, Kumar P, Dillon L, Dutta A. Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters. Nucleic Acids Research. PMID 30828735 DOI: 10.1093/Nar/Gkz155  0.64
2018 Cichewicz MA, Kiran M, Przanowska RK, Sobierajska E, Shibata Y, Dutta A. MUNC, an eRNA upstream from the gene, induces a subgroup of myogenic transcripts , independently of MyoD. Molecular and Cellular Biology. PMID 30037979 DOI: 10.1128/Mcb.00655-17  0.64
2018 Reon BJ, Takao Real Karia B, Kiran M, Dutta A. LINC00152 Promotes Invasion Through a 3'-hairpin Structure and Associates with Prognosis in Glioblastoma. Molecular Cancer Research : McR. PMID 29991527 DOI: 10.1158/1541-7786.Mcr-18-0322  0.48
2018 Zhang Y, Kim J, Mueller AC, Dey B, Yang Y, Lee DH, Hachmann J, Finderle S, Park DM, Christensen J, Schiff D, Purow B, Dutta A, Abounader R. Correction to: Multiple receptor tyrosine kinases converge on microRNA-134 to control KRAS, STAT5B, and glioblastoma. Cell Death and Differentiation. PMID 29899381 DOI: 10.1038/S41418-018-0145-0  0.48
2017 Abbas T, Dutta A. Regulation of Mammalian DNA Replication via the Ubiquitin-Proteasome System. Advances in Experimental Medicine and Biology. 1042: 421-454. PMID 29357069 DOI: 10.1007/978-981-10-6955-0_19  0.44
2017 Kumar P, Dillon L, Shibata Y, Jazaeri AA, Jones DR, Dutta A. Normal and Cancerous Tissues Release extrachromosomal circular DNA (eccDNA) into the Circulation. Molecular Cancer Research : McR. PMID 28550083 DOI: 10.1158/1541-7786.Mcr-17-0095  0.64
2016 Reon BJ, Anaya J, Zhang Y, Mandell J, Purow B, Abounader R, Dutta A. Expression of lncRNAs in Low-Grade Gliomas and Glioblastoma Multiforme: An In Silico Analysis. Plos Medicine. 13: e1002192. PMID 27923049 DOI: 10.1371/Journal.Pmed.1002192  0.48
2016 Shibata E, Kiran M, Shibata Y, Singh S, Kiran S, Dutta A. Two subunits of human ORC are dispensable for DNA replication and proliferation. Elife. 5. PMID 27906128 DOI: 10.7554/Elife.19084  0.64
2016 Kumar P, Kuscu C, Dutta A. Biogenesis and Function of Transfer RNA-Related Fragments (tRFs). Trends in Biochemical Sciences. PMID 27263052 DOI: 10.1016/J.Tibs.2016.05.004  0.88
2016 Kuscu C, Dutta A. A Pro-metastatic tRNA Pathway. Cell. 165: 1314-5. PMID 27259143 DOI: 10.1016/J.Cell.2016.05.066  0.88
2016 Reon BJ, Dutta A. Biological Processes Discovered by High-Throughput Sequencing. The American Journal of Pathology. PMID 26828742 DOI: 10.1016/J.Ajpath.2015.10.033  0.88
2016 Shibata E, Kiran M, Shibata Y, Singh S, Kiran S, Dutta A. Author response: Two subunits of human ORC are dispensable for DNA replication and proliferation Elife. DOI: 10.7554/Elife.19084.011  0.64
2015 Anaya J, Reon B, Chen WM, Bekiranov S, Dutta A. A pan-cancer analysis of prognostic genes. Peerj. 3: e1499. PMID 27047702 DOI: 10.7717/Peerj.1499  0.88
2015 Coleman KE, Grant GD, Haggerty RA, Brantley K, Shibata E, Workman BD, Dutta A, Varma D, Purvis JE, Cook JG. Sequential replication-coupled destruction at G1/S ensures genome stability. Genes & Development. 29: 1734-46. PMID 26272819 DOI: 10.1101/Gad.263731.115  0.88
2015 Dillon LW, Kumar P, Shibata Y, Wang YH, Willcox S, Griffith JD, Pommier Y, Takeda S, Dutta A. Production of Extrachromosomal MicroDNAs Is Linked to Mismatch Repair Pathways and Transcriptional Activity. Cell Reports. 11: 1749-59. PMID 26051933 DOI: 10.1016/J.Celrep.2015.05.020  0.88
2015 Sakurai K, Reon BJ, Anaya J, Dutta A. The lncRNA DRAIC/PCAT29 Locus Constitutes a Tumor-Suppressive Nexus. Molecular Cancer Research : McR. 13: 828-38. PMID 25700553 DOI: 10.1158/1541-7786.Mcr-15-0016-T  0.88
2015 Hong S, Dutta A, Laimins LA. The acetyltransferase Tip60 is a critical regulator of the differentiation-dependent amplification of human papillomaviruses. Journal of Virology. 89: 4668-75. PMID 25673709 DOI: 10.1128/Jvi.03455-14  0.88
2015 Mueller AC, Cichewicz MA, Dey BK, Layer R, Reon BJ, Gagan JR, Dutta A. MUNC, a long noncoding RNA that facilitates the function of MyoD in skeletal myogenesis. Molecular and Cellular Biology. 35: 498-513. PMID 25403490 DOI: 10.1128/Mcb.01079-14  0.88
2015 Dutta A. Anindya dutta Current Biology. 25: R1112-R1114. DOI: 10.1016/j.cub.2015.10.035  0.88
2014 Dey BK, Mueller AC, Dutta A. Long non-coding RNAs as emerging regulators of differentiation, development, and disease. Transcription. 5: e944014. PMID 25483404 DOI: 10.4161/21541272.2014.944014  0.88
2014 Floyd DH, Zhang Y, Dey BK, Kefas B, Breit H, Marks K, Dutta A, Herold-Mende C, Synowitz M, Glass R, Abounader R, Purow BW. Novel anti-apoptotic microRNAs 582-5p and 363 promote human glioblastoma stem cell survival via direct inhibition of caspase 3, caspase 9, and Bim. Plos One. 9: e96239. PMID 24805821 DOI: 10.1371/Journal.Pone.0096239  0.88
2014 Negishi M, Wongpalee SP, Sarkar S, Park J, Lee KY, Shibata Y, Reon BJ, Abounader R, Suzuki Y, Sugano S, Dutta A. A new lncRNA, APTR, associates with and represses the CDKN1A/p21 promoter by recruiting polycomb proteins. Plos One. 9: e95216. PMID 24748121 DOI: 10.1371/Journal.Pone.0095216  0.88
2014 Im JS, Keaton M, Lee KY, Kumar P, Park J, Dutta A. ATR checkpoint kinase and CRL1βTRCP collaborate to degrade ASF1a and thus repress genes overlapping with clusters of stalled replication forks. Genes & Development. 28: 875-87. PMID 24700029 DOI: 10.1101/Gad.239194.114  0.88
2014 Dey BK, Pfeifer K, Dutta A. The H19 long noncoding RNA gives rise to microRNAs miR-675-3p and miR-675-5p to promote skeletal muscle differentiation and regeneration. Genes & Development. 28: 491-501. PMID 24532688 DOI: 10.1101/Gad.234419.113  0.88
2014 Sun D, Layer R, Mueller AC, Cichewicz MA, Negishi M, Paschal BM, Dutta A. Regulation of several androgen-induced genes through the repression of the miR-99a/let-7c/miR-125b-2 miRNA cluster in prostate cancer cells. Oncogene. 33: 1448-57. PMID 23503464 DOI: 10.1038/Onc.2013.77  0.88
2014 Dillon L, Kumar P, Shibata Y, Dutta A. Abstract 2396: Widespread occurrence of extrachromosomal microDNAs in normal and cancerous vertebrate tissues and cell lines Cancer Research. 74: 2396-2396. DOI: 10.1158/1538-7445.Am2014-2396  0.64
2014 Zhang Y, Kim J, Mueller AC, Dey B, Yang Y, Lee D, Hachmann J, Finderle S, Park DM, Christensen J, Schiff D, Purow B, Dutta A, Abounader R. Abstract 1909: Identification and characterization of microRNA-134 as a novel receptor tyrosine kinase-regulated tumor suppressive hub in glioblastoma Cancer Research. 74: 1909-1909. DOI: 10.1158/1538-7445.Am2014-1909  0.48
2013 Im JS, Lee KY, Dillon LW, Dutta A. Human Primpol1: a novel guardian of stalled replication forks. Embo Reports. 14: 1032-3. PMID 24189099 DOI: 10.1038/Embor.2013.171  0.88
2013 Wagenseller AG, Shada A, D'Auria KM, Murphy C, Sun D, Molhoek KR, Papin JA, Dutta A, Slingluff CL. MicroRNAs induced in melanoma treated with combination targeted therapy of Temsirolimus and Bevacizumab. Journal of Translational Medicine. 11: 218. PMID 24047116 DOI: 10.1200/Jco.2012.30.15_Suppl.8597  0.88
2013 Terai K, Shibata E, Abbas T, Dutta A. Degradation of p12 subunit by CRL4Cdt2 E3 ligase inhibits fork progression after DNA damage. The Journal of Biological Chemistry. 288: 30509-14. PMID 24022480 DOI: 10.1074/Jbc.C113.505586  0.88
2013 Jazaeri AA, Shibata E, Park J, Bryant JL, Conaway MR, Modesitt SC, Smith PG, Milhollen MA, Berger AJ, Dutta A. Overcoming platinum resistance in preclinical models of ovarian cancer using the neddylation inhibitor MLN4924. Molecular Cancer Therapeutics. 12: 1958-67. PMID 23939375 DOI: 10.1158/1535-7163.Mct-12-1028  0.88
2013 Abbas T, Keaton M, Dutta A. Regulation of TGF-β signaling, exit from the cell cycle, and cellular migration through cullin cross-regulation: SCF-FBXO11 turns off CRL4-Cdt2. Cell Cycle (Georgetown, Tex.). 12: 2175-82. PMID 23892434 DOI: 10.4161/Cc.25314  0.88
2013 Malhotra A, Shibata Y, Hall IM, Dutta A. Chromosomal structural variations during progression of a prostate epithelial cell line to a malignant metastatic state inactivate the NF2, NIPSNAP1, UGT2B17, and LPIN2 genes. Cancer Biology & Therapy. 14: 840-52. PMID 23792589 DOI: 10.4161/Cbt.25329  0.64
2013 Snow CJ, Dar A, Dutta A, Kehlenbach RH, Paschal BM. Defective nuclear import of Tpr in Progeria reflects the Ran sensitivity of large cargo transport. The Journal of Cell Biology. 201: 541-57. PMID 23649804 DOI: 10.1083/Jcb.201212117  0.88
2013 Rosenbaum J, Baek SH, Dutta A, Houry WA, Huber O, Hupp TR, Matias PM. The emergence of the conserved AAA+ ATPases Pontin and Reptin on the signaling landscape. Science Signaling. 6: mr1. PMID 23482663 DOI: 10.1126/Scisignal.2003906  0.88
2013 Abbas T, Mueller AC, Shibata E, Keaton M, Rossi M, Dutta A. CRL1-FBXO11 promotes Cdt2 ubiquitylation and degradation and regulates Pr-Set7/Set8-mediated cellular migration. Molecular Cell. 49: 1147-58. PMID 23478445 DOI: 10.1016/J.Molcel.2013.02.003  0.88
2013 Park J, Long DT, Lee KY, Abbas T, Shibata E, Negishi M, Luo Y, Schimenti JC, Gambus A, Walter JC, Dutta A. The MCM8-MCM9 complex promotes RAD51 recruitment at DNA damage sites to facilitate homologous recombination. Molecular and Cellular Biology. 33: 1632-44. PMID 23401855 DOI: 10.1128/Mcb.01503-12  0.88
2013 Abbas T, Keaton MA, Dutta A. Genomic instability in cancer. Cold Spring Harbor Perspectives in Biology. 5: a012914. PMID 23335075 DOI: 10.1101/Cshperspect.A012914  0.88
2013 Gupta A, Jha S, Engel DA, Ornelles DA, Dutta A. Tip60 degradation by adenovirus relieves transcriptional repression of viral transcriptional activator EIA. Oncogene. 32: 5017-25. PMID 23178490 DOI: 10.1038/Onc.2012.534  0.88
2013 Mueller AC, Sun D, Dutta A. The miR-99 family regulates the DNA damage response through its target SNF2H. Oncogene. 32: 1164-72. PMID 22525276 DOI: 10.1038/Onc.2012.131  0.48
2013 Dillon L, Kumar P, Shibata Y, Dutta A. Abstract 1771: Extrachromosomal microDNAs in normal vertebrate tissues. Cancer Research. 73: 1771-1771. DOI: 10.1158/1538-7445.Am2013-1771  0.64
2012 Dey BK, Mueller AC, Dutta A. Non-micro-short RNAs: the new kids on the block. Molecular Biology of the Cell. 23: 4664-7. PMID 23239791 DOI: 10.1091/Mbc.E12-10-0716  0.88
2012 Gagan J, Dey BK, Layer R, Yan Z, Dutta A. Notch3 and Mef2c proteins are mutually antagonistic via Mkp1 protein and miR-1/206 microRNAs in differentiating myoblasts. The Journal of Biological Chemistry. 287: 40360-70. PMID 23055528 DOI: 10.1074/Jbc.M112.378414  0.88
2012 Dey BK, Gagan J, Yan Z, Dutta A. miR-26a is required for skeletal muscle differentiation and regeneration in mice. Genes & Development. 26: 2180-91. PMID 23028144 DOI: 10.1101/Gad.198085.112  0.88
2012 Shibata Y, Kumar P, Layer R, Willcox S, Gagan JR, Griffith JD, Dutta A. Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues. Science (New York, N.Y.). 336: 82-6. PMID 22403181 DOI: 10.1126/Science.1213307  0.64
2012 Gagan J, Dey BK, Dutta A. MicroRNAs regulate and provide robustness to the myogenic transcriptional network. Current Opinion in Pharmacology. 12: 383-8. PMID 22386695 DOI: 10.1016/J.Coph.2012.02.001  0.88
2012 Shibata Y, Kumar P, Layer R, Willcox S, Gagan JR, Griffith JD, Dutta A. Abstract SY23-01: Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues Cancer Research. 72. DOI: 10.1158/1538-7445.Am2012-Sy23-01  0.64
2011 Jazaeri AA, Bryant JL, Park H, Li H, Dahiya N, Stoler MH, Ferriss JS, Dutta A. Molecular requirements for transformation of fallopian tube epithelial cells into serous carcinoma. Neoplasia (New York, N.Y.). 13: 899-911. PMID 22028616 DOI: 10.1593/Neo.11138  0.88
2011 Mueller AC, Keaton MA, Dutta A. DNA replication: mammalian Treslin-TopBP1 interaction mirrors yeast Sld3-Dpb11. Current Biology : Cb. 21: R638-40. PMID 21855008 DOI: 10.1016/J.Cub.2011.07.004  0.88
2011 Keaton MA, Dutta A. Rad18 emerges as a critical regulator of the Fanconi anemia pathway. Cell Cycle (Georgetown, Tex.). 10: 2414-5. PMID 21795845 DOI: 10.4161/Cc.10.15.15930  0.88
2011 Van Rechem C, Black JC, Abbas T, Allen A, Rinehart CA, Yuan GC, Dutta A, Whetstine JR. The SKP1-Cul1-F-box and leucine-rich repeat protein 4 (SCF-FbxL4) ubiquitin ligase regulates lysine demethylase 4A (KDM4A)/Jumonji domain-containing 2A (JMJD2A) protein. The Journal of Biological Chemistry. 286: 30462-70. PMID 21757720 DOI: 10.1074/Jbc.M111.273508  0.88
2011 Shibata E, Abbas T, Huang X, Wohlschlegel JA, Dutta A. Selective ubiquitylation of p21 and Cdt1 by UBCH8 and UBE2G ubiquitin-conjugating enzymes via the CRL4Cdt2 ubiquitin ligase complex. Molecular and Cellular Biology. 31: 3136-45. PMID 21628527 DOI: 10.1128/Mcb.05496-11  0.88
2011 Gagan J, Dey BK, Layer R, Yan Z, Dutta A. MicroRNA-378 targets the myogenic repressor MyoR during myoblast differentiation. The Journal of Biological Chemistry. 286: 19431-8. PMID 21471220 DOI: 10.1074/Jbc.M111.219006  0.88
2011 Keaton MA, Taylor CM, Layer RM, Dutta A. Nuclear scaffold attachment sites within ENCODE regions associate with actively transcribed genes. Plos One. 6: e17912. PMID 21423757 DOI: 10.1371/Journal.Pone.0017912  0.88
2011 Karnani N, Dutta A. The effect of the intra-S-phase checkpoint on origins of replication in human cells. Genes & Development. 25: 621-33. PMID 21406556 DOI: 10.1101/Gad.2029711  0.56
2011 Abbas T, Dutta A. CRL4Cdt2: master coordinator of cell cycle progression and genome stability. Cell Cycle (Georgetown, Tex.). 10: 241-9. PMID 21212733 DOI: 10.4161/Cc.10.2.14530  0.44
2011 Sun D, Lee YS, Malhotra A, Kim HK, Matecic M, Evans C, Jensen RV, Moskaluk CA, Dutta A. miR-99 family of MicroRNAs suppresses the expression of prostate-specific antigen and prostate cancer cell proliferation. Cancer Research. 71: 1313-24. PMID 21212412 DOI: 10.1158/0008-5472.Can-10-1031  0.88
2011 Mesner LD, Valsakumar V, Karnani N, Dutta A, Hamlin JL, Bekiranov S. Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription. Genome Research. 21: 377-89. PMID 21173031 DOI: 10.1101/Gr.111328.110  0.56
2011 Dey BK, Gagan J, Dutta A. miR-206 and -486 induce myoblast differentiation by downregulating Pax7. Molecular and Cellular Biology. 31: 203-14. PMID 21041476 DOI: 10.1128/Mcb.01009-10  0.88
2011 Ring KE, Abbas T, Bryant J, Dutta A, Jazaeri AA. Abstract 608: Oncogenic role of cullin 4 E3 ubiquitin ligase (CRL4-CDT2) in epithelial ovarian cancer Cancer Research. 71: 608-608. DOI: 10.1158/1538-7445.Am2011-608  0.44
2011 Dey BK, Gagan J, Dutta A. miR-206 and -486 induce myoblast differentiation by downregulating Pax7 (Molecular and Cellular Biology (2010) 31, 1, (203-214)) Molecular and Cellular Biology. 31: 1329. DOI: 10.1128/MCB.05013-11  0.88
2010 Abbas T, Shibata E, Park J, Jha S, Karnani N, Dutta A. CRL4(Cdt2) regulates cell proliferation and histone gene expression by targeting PR-Set7/Set8 for degradation. Molecular Cell. 40: 9-21. PMID 20932471 DOI: 10.1016/J.Molcel.2010.09.014  0.56
2010 Shibata Y, Malhotra A, Dutta A. Detection of DNA fusion junctions for BCR-ABL translocations by Anchored ChromPET. Genome Medicine. 2: 70. PMID 20860819 DOI: 10.1186/Gm191  0.64
2010 Jha S, Vande Pol S, Banerjee NS, Dutta AB, Chow LT, Dutta A. Destabilization of TIP60 by human papillomavirus E6 results in attenuation of TIP60-dependent transcriptional regulation and apoptotic pathway. Molecular Cell. 38: 700-11. PMID 20542002 DOI: 10.1016/J.Molcel.2010.05.020  0.88
2010 Sarkar S, Dey BK, Dutta A. MiR-322/424 and -503 are induced during muscle differentiation and promote cell cycle quiescence and differentiation by down-regulation of Cdc25A. Molecular Biology of the Cell. 21: 2138-49. PMID 20462953 DOI: 10.1091/Mbc.E10-01-0062  0.88
2010 Jazaeri AA, Ferriss JS, Bryant JL, Dalton MS, Dutta A. Evaluation of EVI1 and EVI1s (Delta324) as potential therapeutic targets in ovarian cancer. Gynecologic Oncology. 118: 189-95. PMID 20462630 DOI: 10.1016/J.Ygyno.2010.04.007  0.88
2010 Terai K, Abbas T, Jazaeri AA, Dutta A. CRL4(Cdt2) E3 ubiquitin ligase monoubiquitinates PCNA to promote translesion DNA synthesis. Molecular Cell. 37: 143-9. PMID 20129063 DOI: 10.1016/J.Molcel.2009.12.018  0.88
2010 Karnani N, Taylor CM, Malhotra A, Dutta A. Genomic study of replication initiation in human chromosomes reveals the influence of transcription regulation and chromatin structure on origin selection. Molecular Biology of the Cell. 21: 393-404. PMID 19955211 DOI: 10.1091/Mbc.E09-08-0707  0.64
2010 Jazaeri AA, Ferriss JS, Machida Y, Dalton S, Bryant JL, Dutta A. Abstract 5480: Expression and function of EVI1 and EVI1s (Δ324) ovarian cancer Cancer Research. 70: 5480-5480. DOI: 10.1158/1538-7445.Am10-5480  0.32
2009 Lee YS, Shibata Y, Malhotra A, Dutta A. A novel class of small RNAs: tRNA-derived RNA fragments (tRFs). Genes & Development. 23: 2639-49. PMID 19933153 DOI: 10.1101/Gad.1837609  0.92
2009 Machida YJ, Machida Y, Vashisht AA, Wohlschlegel JA, Dutta A. The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1. The Journal of Biological Chemistry. 284: 34179-88. PMID 19815555 DOI: 10.1074/Jbc.M109.046755  0.88
2009 Shibata Y, Malhotra A, Bekiranov S, Dutta A. Yeast genome analysis identifies chromosomal translocation, gene conversion events and several sites of Ty element insertion. Nucleic Acids Research. 37: 6454-65. PMID 19710036 DOI: 10.1093/Nar/Gkp650  0.64
2009 Karnani N, Taylor CM, Dutta A. Microarray analysis of DNA replication timing. Methods in Molecular Biology (Clifton, N.J.). 556: 191-203. PMID 19488880 DOI: 10.1007/978-1-60327-192-9_14  0.56
2009 Abbas T, Dutta A. p21 in cancer: intricate networks and multiple activities. Nature Reviews. Cancer. 9: 400-14. PMID 19440234 DOI: 10.1038/Nrc2657  0.44
2009 Lee YS, Dutta A. MicroRNAs in cancer. Annual Review of Pathology. 4: 199-227. PMID 18817506 DOI: 10.1146/Annurev.Pathol.4.110807.092222  0.92
2008 Abbas T, Sivaprasad U, Terai K, Amador V, Pagano M, Dutta A. PCNA-dependent regulation of p21 ubiquitylation and degradation via the CRL4Cdt2 ubiquitin ligase complex. Genes & Development. 22: 2496-506. PMID 18794347 DOI: 10.1101/Gad.1676108  0.6
2008 Lew DJ, Burke DJ, Dutta A. The immortal strand hypothesis: how could it work? Cell. 133: 21-3. PMID 18394982 DOI: 10.1016/J.Cell.2008.03.016  0.88
2007 Deng Z, Dheekollu J, Broccoli D, Dutta A, Lieberman PM. The origin recognition complex localizes to telomere repeats and prevents telomere-circle formation. Current Biology : Cb. 17: 1989-95. PMID 18006317 DOI: 10.1016/J.Cub.2007.10.054  0.88
2007 Alpi A, Langevin F, Mosedale G, Machida YJ, Dutta A, Patel KJ. UBE2T, the Fanconi anemia core complex, and FANCD2 are recruited independently to chromatin: a basis for the regulation of FANCD2 monoubiquitination. Molecular and Cellular Biology. 27: 8421-30. PMID 17938197 DOI: 10.1128/Mcb.00504-07  0.32
2007 Zhu W, Ukomadu C, Jha S, Senga T, Dhar SK, Wohlschlegel JA, Nutt LK, Kornbluth S, Dutta A. Mcm10 and And-1/CTF4 recruit DNA polymerase alpha to chromatin for initiation of DNA replication. Genes & Development. 21: 2288-99. PMID 17761813 DOI: 10.1101/Gad.1585607  0.88
2007 Birney E, Stamatoyannopoulos JA, Dutta A, Guigó R, Gingeras TR, Margulies EH, Weng Z, Snyder M, Dermitzakis ET, Thurman RE, Kuehn MS, Taylor CM, Neph S, Koch CM, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature. 447: 799-816. PMID 17571346 DOI: 10.1038/Nature05874  0.88
2007 Karnani N, Taylor C, Malhotra A, Dutta A. Pan-S replication patterns and chromosomal domains defined by genome-tiling arrays of ENCODE genomic areas. Genome Research. 17: 865-76. PMID 17568004 DOI: 10.1101/Gr.5427007  0.64
2007 Lee YS, Dutta A. The tumor suppressor microRNA let-7 represses the HMGA2 oncogene. Genes & Development. 21: 1025-30. PMID 17437991 DOI: 10.1101/Gad.1540407  0.92
2007 Abbas T, Jha S, Sherman NE, Dutta A. Autocatalytic phosphorylation of CDK2 at the activating Thr160. Cell Cycle (Georgetown, Tex.). 6: 843-52. PMID 17361108 DOI: 10.4161/Cc.6.7.4000  0.44
2007 Sivaprasad U, Machida YJ, Dutta A. APC/C--the master controller of origin licensing? Cell Division. 2: 8. PMID 17319958 DOI: 10.1186/1747-1028-2-8  0.6
2007 Machida YJ, Dutta A. The APC/C inhibitor, Emi1, is essential for prevention of rereplication. Genes & Development. 21: 184-94. PMID 17234884 DOI: 10.1101/Gad.1495007  0.32
2007 Dutta A. Chaotic license for genetic instability and cancer. Nature Genetics. 39: 10-1. PMID 17192781 DOI: 10.1038/Ng0107-10  0.88
2006 Zhu W, Dutta A. Activation of fanconi anemia pathway in cells with re-replicated DNA. Cell Cycle (Georgetown, Tex.). 5: 2306-9. PMID 17102625 DOI: 10.4161/Cc.5.20.3364  0.96
2006 Sivaprasad U, Abbas T, Dutta A. Differential efficacy of 3-hydroxy-3-methylglutaryl CoA reductase inhibitors on the cell cycle of prostate cancer cells. Molecular Cancer Therapeutics. 5: 2310-6. PMID 16985065 DOI: 10.1158/1535-7163.Mct-06-0175  0.6
2006 Machida YJ, Chen Y, Machida Y, Malhotra A, Sarkar S, Dutta A. Targeted comparative RNA interference analysis reveals differential requirement of genes essential for cell proliferation. Molecular Biology of the Cell. 17: 4837-45. PMID 16957053 DOI: 10.1091/Mbc.E06-04-0340  0.64
2006 Kim HK, Lee YS, Sivaprasad U, Malhotra A, Dutta A. Muscle-specific microRNA miR-206 promotes muscle differentiation. The Journal of Cell Biology. 174: 677-87. PMID 16923828 DOI: 10.1083/Jcb.200603008  0.92
2006 Machida YJ, Machida Y, Chen Y, Gurtan AM, Kupfer GM, D'Andrea AD, Dutta A. UBE2T is the E2 in the Fanconi anemia pathway and undergoes negative autoregulation. Molecular Cell. 23: 589-96. PMID 16916645 DOI: 10.1016/J.Molcel.2006.06.024  0.52
2006 Lee YS, Dutta A. MicroRNAs: small but potent oncogenes or tumor suppressors. Current Opinion in Investigational Drugs (London, England : 2000). 7: 560-4. PMID 16784027  0.92
2006 Zhu W, Dutta A. An ATR- and BRCA1-mediated Fanconi anemia pathway is required for activating the G2/M checkpoint and DNA damage repair upon rereplication. Molecular and Cellular Biology. 26: 4601-11. PMID 16738325 DOI: 10.1128/Mcb.02141-05  0.96
2006 Abbas T, Dutta A. CDK2-activating kinase (CAK): more questions than answers. Cell Cycle (Georgetown, Tex.). 5: 1123-4. PMID 16687928 DOI: 10.4161/Cc.5.10.2819  0.44
2006 Ernkvist M, Aase K, Ukomadu C, Wohlschlegel J, Blackman R, Veitonmäki N, Bratt A, Dutta A, Holmgren L. p130-angiomotin associates to actin and controls endothelial cell shape. The Febs Journal. 273: 2000-11. PMID 16640563 DOI: 10.1111/J.1742-4658.2006.05216.X  0.88
2006 Senga T, Sivaprasad U, Zhu W, Park JH, Arias EE, Walter JC, Dutta A. PCNA is a cofactor for Cdt1 degradation by CUL4/DDB1-mediated N-terminal ubiquitination. The Journal of Biological Chemistry. 281: 6246-52. PMID 16407252 DOI: 10.1074/Jbc.M512705200  0.88
2006 Teer JK, Machida YJ, Labit H, Novac O, Hyrien O, Marheineke K, Zannis-Hadjopoulos M, Dutta A. Proliferating human cells hypomorphic for origin recognition complex 2 and pre-replicative complex formation have a defect in p53 activation and Cdk2 kinase activation. The Journal of Biological Chemistry. 281: 6253-60. PMID 16407251 DOI: 10.1074/Jbc.M507150200  0.88
2006 Sivaprasad U, Dutta A, Bell SP. 3 Assembly of Pre-replication Complexes Cold Spring Harbor Monograph Archive. 47: 63-88. DOI: 10.1101/087969766.47.63  0.88
2005 Zhu W, Abbas T, Dutta A. DNA replication and genomic instability. Advances in Experimental Medicine and Biology. 570: 249-79. PMID 18727504 DOI: 10.1007/1-4020-3764-3_9  0.96
2005 Takeda DY, Shibata Y, Parvin JD, Dutta A. Recruitment of ORC or CDC6 to DNA is sufficient to create an artificial origin of replication in mammalian cells. Genes & Development. 19: 2827-36. PMID 16322558 DOI: 10.1101/Gad.1369805  0.88
2005 Machida YJ, Hamlin JL, Dutta A. Right place, right time, and only once: replication initiation in metazoans. Cell. 123: 13-24. PMID 16213209 DOI: 10.1016/J.Cell.2005.09.019  0.32
2005 Machida YJ, Teer JK, Dutta A. Acute reduction of an origin recognition complex (ORC) subunit in human cells reveals a requirement of ORC for Cdk2 activation. The Journal of Biological Chemistry. 280: 27624-30. PMID 15944161 DOI: 10.1074/Jbc.M502615200  0.32
2005 Blow JJ, Dutta A. Preventing re-replication of chromosomal DNA. Nature Reviews. Molecular Cell Biology. 6: 476-86. PMID 15928711 DOI: 10.1038/Nrm1663  0.88
2005 Karnani N, Dutta A. Nuclear localization of RFC40 by RIalpha: a link between cellular signaling and proliferation. Cancer Biology & Therapy. 4: 438-9. PMID 15908789 DOI: 10.4161/Cbt.4.4.1778  0.56
2005 Takeda DY, Parvin JD, Dutta A. Degradation of Cdt1 during S phase is Skp2-independent and is required for efficient progression of mammalian cells through S phase. The Journal of Biological Chemistry. 280: 23416-23. PMID 15855168 DOI: 10.1074/Jbc.M501208200  0.88
2005 Jeon Y, Bekiranov S, Karnani N, Kapranov P, Ghosh S, MacAlpine D, Lee C, Hwang DS, Gingeras TR, Dutta A. Temporal profile of replication of human chromosomes. Proceedings of the National Academy of Sciences of the United States of America. 102: 6419-24. PMID 15845769 DOI: 10.1073/Pnas.0405088102  0.56
2005 Takeda DY, Dutta A. DNA replication and progression through S phase. Oncogene. 24: 2827-43. PMID 15838518 DOI: 10.1038/Sj.Onc.1208616  0.88
2005 Lee YS, Kim HK, Chung S, Kim KS, Dutta A. Depletion of human micro-RNA miR-125b reveals that it is critical for the proliferation of differentiated cells but not for the down-regulation of putative targets during differentiation. The Journal of Biological Chemistry. 280: 16635-41. PMID 15722555 DOI: 10.1074/Jbc.M412247200  0.92
2004 Jónsson ZO, Jha S, Wohlschlegel JA, Dutta A. Rvb1p/Rvb2p recruit Arp5p and assemble a functional Ino80 chromatin remodeling complex. Molecular Cell. 16: 465-77. PMID 15525518 DOI: 10.1016/J.Molcel.2004.09.033  0.88
2004 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, Wetterstrand K, Collins FS, Gingeras TR, Kampa D, Sekinger EA, Cheng J, Hirsch H, Ghosh S, Zhu Z, Patel S, ... ... Dutta A, et al. The ENCODE (ENCyclopedia of DNA Elements) Project Science. 306: 636-640. PMID 15499007 DOI: 10.1126/Science.1105136  0.88
2004 Zhu W, Chen Y, Dutta A. Rereplication by depletion of geminin is seen regardless of p53 status and activates a G2/M checkpoint. Molecular and Cellular Biology. 24: 7140-50. PMID 15282313 DOI: 10.1128/Mcb.24.16.7140-7150.2004  0.96
2004 Saxena S, Yuan P, Dhar SK, Senga T, Takeda D, Robinson H, Kornbluth S, Swaminathan K, Dutta A. A dimerized coiled-coil domain and an adjoining part of geminin interact with two sites on Cdt1 for replication inhibition. Molecular Cell. 15: 245-58. PMID 15260975 DOI: 10.1016/J.Molcel.2004.06.045  0.88
2004 Lee YS, Jeon Y, Park JH, Hwang DS, Dutta A. Expression of PACT and EIF2C2, Implicated in RNAi and MicroRNA pathways, in various human cell lines Animal Cells and Systems. 8: 213-220. DOI: 10.1080/12265071.2004.9647753  0.92
2003 Vaziri C, Saxena S, Jeon Y, Lee C, Murata K, Machida Y, Wagle N, Hwang DS, Dutta A. A p53-dependent checkpoint pathway prevents rereplication. Molecular Cell. 11: 997-1008. PMID 12718885 DOI: 10.1016/S1097-2765(03)00099-6  0.56
2003 Vaziri C, Saxena S, Jeon Y, Lee C, Murata K, Machida Y, Wagle N, Hwang DS, Dutta A. Erratum: A p53-dependent checkpoint pathway prevents rereplication (Molecular Cell (April 2003) 11 (997-1008)) Molecular Cell. 11. DOI: 10.1016/S1097-2765(03)00202-8  0.56
2002 Wohlschlegel JA, Kutok JL, Weng AP, Dutta A. Expression of geminin as a marker of cell proliferation in normal tissues and malignancies. The American Journal of Pathology. 161: 267-73. PMID 12107111 DOI: 10.1016/S0002-9440(10)64178-8  0.88
2002 Bell SP, Dutta A. DNA replication in eukaryotic cells Annual Review of Biochemistry. 71: 333-374. PMID 12045100 DOI: 10.1146/Annurev.Biochem.71.110601.135425  0.88
2002 Wohlschlegel JA, Dhar SK, Prokhorova TA, Dutta A, Walter JC. Xenopus Mcm10 binds to origins of DNA replication after Mcm2-7 and stimulates origin binding of Cdc45. Molecular Cell. 9: 233-40. PMID 11864598 DOI: 10.1016/S1097-2765(02)00456-2  0.88
2001 Dhar SK, Yoshida K, Machida Y, Khaira P, Chaudhuri B, Wohlschlegel JA, Leffak M, Yates J, Dutta A. Replication from oriP of Epstein-Barr virus requires human ORC and is inhibited by geminin. Cell. 106: 287-96. PMID 11509178 DOI: 10.1016/S0092-8674(01)00458-5  0.88
2001 Wohlschlegel JA, Dwyer BT, Takeda DY, Dutta A. Mutational analysis of the Cy motif from p21 reveals sequence degeneracy and specificity for different cyclin-dependent kinases. Molecular and Cellular Biology. 21: 4868-74. PMID 11438644 DOI: 10.1128/Mcb.21.15.4868-4874.2001  0.88
2001 Yoshida K, Kuo F, George EL, Sharpe AH, Dutta A. Requirement of CDC45 for postimplantation mouse development Molecular and Cellular Biology. 21: 4598-4603. PMID 11416137 DOI: 10.1128/Mcb.21.14.4598-4603.2001  0.88
2001 Dhar SK, Delmolino L, Dutta A. Architecture of the human origin recognition complex. Journal of Biological Chemistry. 276: 29067-29071. PMID 11395502 DOI: 10.1074/Jbc.M103078200  0.6
2001 Jónsson ZO, Dhar SK, Narlikar GJ, Auty R, Wagle N, Pellman D, Pratt RE, Kingston R, Dutta A. Rvb1p and Rvb2p are essential components of a chromatin remodeling complex that regulates transcription of over 5% of yeast genes. The Journal of Biological Chemistry. 276: 16279-88. PMID 11278922 DOI: 10.1074/Jbc.M011523200  0.88
2001 Takeda DY, Wohlschlegel JA, Dutta A. A bipartite substrate recognition motif for cyclin-dependent kinases. The Journal of Biological Chemistry. 276: 1993-7. PMID 11067844 DOI: 10.1074/Jbc.M005719200  0.88
2000 Wohlschlegel JA, Dwyer BT, Dhar SK, Cvetic C, Walter JC, Dutta A. Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. Science (New York, N.Y.). 290: 2309-12. PMID 11125146 DOI: 10.1126/Science.290.5500.2309  0.88
2000 Thome KC, Dhar SK, Quintana DG, Delmolino L, Shahsafaei A, Dutta A. Subsets of human origin recognition complex (ORC) subunits are expressed in non-proliferating cells and associate with non-ORC proteins. The Journal of Biological Chemistry. 275: 35233-41. PMID 10954718 DOI: 10.1074/Jbc.M005765200  0.88
2000 Dhar SK, Dutta A. Identification and Characterization of the Human ORC6 Homolog Journal of Biological Chemistry. 275: 34983-34988. PMID 10945994 DOI: 10.1074/Jbc.M006069200  0.6
1999 Pinto S, Quintana DG, Smith P, Mihalek RM, Hou ZH, Boynton S, Jones CJ, Hendricks M, Velinzon K, Wohlschlegel JA, Austin RJ, Lane WS, Tully T, Dutta A. latheo encodes a subunit of the origin recognition complex and disrupts neuronal proliferation and adult olfactory memory when mutant. Neuron. 23: 45-54. PMID 10402192 DOI: 10.1016/S0896-6273(00)80752-7  0.88
1998 Qiu XB, Lin YL, Thome KC, Pian P, Schlegel BP, Weremowicz S, Parvin JD, Dutta A. An eukaryotic RuvB-like protein (RUVBL1) essential for growth. The Journal of Biological Chemistry. 273: 27786-93. PMID 9774387 DOI: 10.1074/Jbc.273.43.27786  0.4
1998 Dutta A. Regulation of S phase Results and Problems in Cell Differentiation. 22: 35-55. PMID 9670318 DOI: 10.1007/978-3-540-69686-5_2  0.88
1998 Saha P, Thome KC, Yamaguchi R, Hou Z, Weremowicz S, Dutta A. The human homolog of Saccharomyces cerevisiae CDC45. The Journal of Biological Chemistry. 273: 18205-9. PMID 9660782 DOI: 10.1074/Jbc.273.29.18205  0.44
1998 Saha P, Chen J, Thome KC, Lawlis SJ, Hou ZH, Hendricks M, Parvin JD, Dutta A. Human CDC6/Cdc18 associates with Orc1 and cyclin-cdk and is selectively eliminated from the nucleus at the onset of S phase. Molecular and Cellular Biology. 18: 2758-67. PMID 9566895 DOI: 10.1128/Mcb.18.5.2758  0.44
1998 Lin YL, Shivji MKK, Chen C, Kolodner R, Wood RD, Dutta A. The evolutionarily conserved zinc finger motif in the largest subunit of human replication protein A is required for DNA replication and mismatch repair but not for nucleotide excision repair Journal of Biological Chemistry. 273: 1453-1461. PMID 9430682 DOI: 10.1074/Jbc.273.3.1453  0.88
1997 Dutta A, Bell SP. Initiation of DNA replication in eukaryotic cells. Annual Review of Cell and Developmental Biology. 13: 293-332. PMID 9442876 DOI: 10.1146/Annurev.Cellbio.13.1.293  0.88
1997 Quintana DG, Hou Zh, Thome KC, Hendricks M, Saha P, Dutta A. Identification of HsORC4, a member of the human origin of replication recognition complex. The Journal of Biological Chemistry. 272: 28247-51. PMID 9353276 DOI: 10.1074/Jbc.272.45.28247  0.44
1997 Saha P, Eichbaum Q, Silberman ED, Mayer BJ, Dutta A. p21CIP1 and Cdc25A: competition between an inhibitor and an activator of cyclin-dependent kinases. Molecular and Cellular Biology. 17: 4338-45. PMID 9234691 DOI: 10.1128/Mcb.17.8.4338  0.88
1996 Chen U, Chen S, Saha P, Dutta A. p21Cip1/Waf1 disrupts the recruitment of human Fen1 by proliferating-cell nuclear antigen into the DNA replication complex Proceedings of the National Academy of Sciences of the United States of America. 93: 11597-11602. PMID 8876181 DOI: 10.1073/Pnas.93.21.11597  0.44
1996 Henricksen LA, Carter T, Dutta A, Wold MS. Phosphorylation of human replication protein A by the DNA-dependent protein kinase is involved in the modulation of DNA replication. Nucleic Acids Research. 24: 3107-12. PMID 8760901 DOI: 10.1093/Nar/24.15.3107  0.88
1996 Chen J, Saha P, Kornbluth S, Dynlacht BD, Dutta A. Cyclin-binding motifs are essential for the function of p21CIP1. Molecular and Cellular Biology. 16: 4673-82. PMID 8756624 DOI: 10.1128/Mcb.16.9.4673  0.88
1996 Chen J, Peters R, Saha P, Lee P, Theodoras A, Pagano M, Wagner G, Dutta A. A 39 Amino Acid Fragment of the Cell Cycle Regulator p21 Is Sufficient to Bind PCNA and Partially Inhibit DNA Replication in vivo Nucleic Acids Research. 24: 1727-1733. PMID 8649992 DOI: 10.1093/Nar/24.9.1727  0.44
1995 Chen J, Jackson PK, Kirschner MW, Dutta A. Separate domains of p21 involved in the inhibition of Cdk kinase and PCNA. Nature. 374: 386-8. PMID 7885482 DOI: 10.1038/374386A0  0.88
1993 Dutta A. Trans-plication factors? Current Biology. 3: 709-712. DOI: 10.1016/0960-9822(93)90076-Z  0.88
1992 Dutta A, Stillman B. cdc2 family kinases phosphorylate a human cell DNA replication factor, RPA, and activate DNA replication. The Embo Journal. 11: 2189-99. PMID 1318195 DOI: 10.1002/J.1460-2075.1992.Tb05278.X  0.56
1991 Dutta A, Din S, Brill SJ, Stillman B. Phosphorylation of replication protein A: A role for cdc2 kinase in G1/S regulation Cold Spring Harbor Symposia On Quantitative Biology. 56: 315-324. PMID 1840253 DOI: 10.1101/Sqb.1991.056.01.038  0.88
1990 Dutta A, Stoeckle MY, Hanafusa H. Serum and v-src increase the level of a CCAAT-binding factor required for transcription from a retroviral long terminal repeat Genes and Development. 4: 243-254. PMID 2159932 DOI: 10.1101/Gad.4.2.243  0.88
1990 Dutta A, Hamaguchi M, Hanafusa H. Serum independence of transcription from the promoter of an avian retrovirus in v-src-transformed cells is a primary, intracellular effect of increased tyrosine phosphorylation Proceedings of the National Academy of Sciences of the United States of America. 87: 608-612. PMID 1689046 DOI: 10.1073/Pnas.87.2.608  0.88
1988 Dutta A, Dorai T, Hanafusa H. The putative trans-activator in the MAgag region of Rous sarcoma virus is not required for cell transformation. Journal of Virology. 62: 4767-4769. PMID 2846886 DOI: 10.1128/Jvi.62.12.4767-4769.1988  0.8
1985 Dutta A, Wang LH, Hanafusa T, Hanafusa H. Partial nucleotide sequence of Rous sarcoma virus-29 provides evidence that the original Rous sarcoma virus was replication defective. Journal of Virology. 55: 728-735. DOI: 10.1128/Jvi.55.3.728-735.1985  0.36
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