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Mary E. Pacold, Ph.D. - Publications

Affiliations: 
2010 Bioinformatics University of California, San Diego, La Jolla, CA 
Area:
Virology Biology, Bioinformatics Biology
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15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Wagner GA, Pacold ME, Kosakovsky Pond SL, Caballero G, Chaillon A, Rudolph AE, Morris SR, Little SJ, Richman DD, Smith DM. Incidence and prevalence of intrasubtype HIV-1 dual infection in at-risk men in the United States. The Journal of Infectious Diseases. 209: 1032-8. PMID 24273040 DOI: 10.1093/Infdis/Jit633  0.692
2013 Chaillon A, Wagner GA, Hepler NL, Little SJ, Kosakovsky Pond SL, Caballero G, Pacold ME, Phung P, Wrin T, Richman DD, Wertheim JO, Smith DM. Dynamics of viral evolution and neutralizing antibody response after HIV-1 superinfection. Journal of Virology. 87: 12737-44. PMID 24049166 DOI: 10.1128/Jvi.02260-13  0.59
2013 Hightower GK, May SJ, Pérez-Santiago J, Pacold ME, Wagner GA, Little SJ, Richman DD, Mehta SR, Smith DM, Pond SL. HIV-1 clade B pol evolution following primary infection. Plos One. 8: e68188. PMID 23840830 DOI: 10.1371/Journal.Pone.0068188  0.662
2013 Wagner GA, Pacold ME, Vigil E, Caballero G, Morris SR, Kosakovsky Pond SL, Little SJ, Richman DD, Gianella S, Smith DM. Using ultradeep pyrosequencing to study HIV-1 coreceptor usage in primary and dual infection. The Journal of Infectious Diseases. 208: 271-4. PMID 23599311 DOI: 10.1093/Infdis/Jit168  0.616
2013 Margeridon-Thermet S, Svarovskaia ES, Babrzadeh F, Martin R, Liu TF, Pacold M, Reuman EC, Holmes SP, Borroto-Esoda K, Shafer RW. Low-level persistence of drug resistance mutations in hepatitis B virus-infected subjects with a past history of lamivudine treatment Antimicrobial Agents and Chemotherapy. 57: 343-349. PMID 23114756 DOI: 10.1128/Aac.01601-12  0.328
2013 Babrzadeh F, Varghese V, Pacold M, Liu TF, Nyrén P, Schiffer C, Fessel WJ, Shafer RW. Collinearity of protease mutations in HIV-1 samples with high-level protease inhibitor class resistance Journal of Antimicrobial Chemotherapy. 68: 414-418. PMID 23085775 DOI: 10.1093/Jac/Dks409  0.345
2012 Pacold ME, Pond SL, Wagner GA, Delport W, Bourque DL, Richman DD, Little SJ, Smith DM. Clinical, virologic, and immunologic correlates of HIV-1 intraclade B dual infection among men who have sex with men. Aids (London, England). 26: 157-65. PMID 22045341 DOI: 10.1097/Qad.0B013E32834Dcd26  0.681
2011 Gianella S, Delport W, Pacold ME, Young JA, Choi JY, Little SJ, Richman DD, Kosakovsky Pond SL, Smith DM. Detection of minority resistance during early HIV-1 infection: natural variation and spurious detection rather than transmission and evolution of multiple viral variants. Journal of Virology. 85: 8359-67. PMID 21632754 DOI: 10.1128/Jvi.02582-10  0.605
2010 Pacold M, Smith D, Little S, Cheng PM, Jordan P, Ignacio C, Richman D, Pond SK. Comparison of methods to detect HIV dual infection. Aids Research and Human Retroviruses. 26: 1291-8. PMID 20954840 DOI: 10.1089/Aid.2010.0042  0.665
2010 Manosuthi W, Butler DM, Pérez-Santiago J, Poon AF, Pillai SK, Mehta SR, Pacold ME, Richman DD, Pond SK, Smith DM. Protease polymorphisms in HIV-1 subtype CRF01_AE represent selection by antiretroviral therapy and host immune pressure. Aids (London, England). 24: 411-6. PMID 20009919 DOI: 10.1097/Qad.0B013E3283350Eef  0.59
2009 Butler DM, Pacold ME, Jordan PS, Richman DD, Smith DM. The efficiency of single genome amplification and sequencing is improved by quantitation and use of a bioinformatics tool. Journal of Virological Methods. 162: 280-3. PMID 19698751 DOI: 10.1016/J.Jviromet.2009.08.002  0.494
2009 Pacold M. Retroviruses and opportunistic infections--16th annual conference. Characteristics and prevention of HIV transmission. 8-11 February 2009, Montréal, QC, Canada. Idrugs : the Investigational Drugs Journal. 12: 204-6. PMID 19350458  0.546
2009 Smith DM, May SJ, Tweeten S, Drumright L, Pacold ME, Kosakovsky Pond SL, Pesano RL, Lie YS, Richman DD, Frost SD, Woelk CH, Little SJ. A public health model for the molecular surveillance of HIV transmission in San Diego, California. Aids (London, England). 23: 225-32. PMID 19098493 DOI: 10.1097/Qad.0B013E32831D2A81  0.579
2008 Pacold M, Soto P. Retroviruses and opportunistic infections - 15th annual conference. Idrugs : the Investigational Drugs Journal. 11: 233-5. PMID 18379950  0.649
2008 Cachay ER, Frost SD, Poon AF, Looney D, Rostami SM, Pacold ME, Richman DD, Little SJ, Smith DM. Herpes simplex virus type 2 acquisition during recent HIV infection does not influence plasma HIV levels. Journal of Acquired Immune Deficiency Syndromes (1999). 47: 592-6. PMID 18197122 DOI: 10.1097/Qai.0B013E318163Bd87  0.675
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