Yi-Lei Zhao, Ph.D. - Publications

2002 Hong Kong University of Science and Technology (Hong Kong) 
Physical Chemistry, Biochemistry

54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Wang X, Jing X, Deng Y, Nie Y, Xu F, Xu Y, Zhao YL, Hunt JF, Montelione GT, Szyperski T. Evolutionary coupling saturation mutagenesis: Coevolution-guided identification of distant sites influencing Bacillus naganoensis pullulanase activity. Febs Letters. PMID 31665817 DOI: 10.1002/1873-3468.13652  0.4
2019 Zhang F, Shi T, Ji H, Ali I, Huang S, Deng Z, Min Q, Bai L, Zhao YL, Zheng J. Structural Insights into Substrate Specificity of Acyltransferases from Salinomycin Polyketide Synthase. Biochemistry. PMID 31199122 DOI: 10.1021/acs.biochem.9b00305  0.48
2019 Zhang Z, Jamieson CS, Zhao YL, Li D, Ohashi M, Houk KN, Tang Y. Enzyme-catalyzed inverse-electron demand Diels-Alder reaction in the biosynthesis of antifungal ilicicolin H. Journal of the American Chemical Society. PMID 30905148 DOI: 10.1021/jacs.9b02204  0.44
2019 Fan S, Wang R, Li C, Bai L, Zhao YL, Shi T. Insight into Structural Characteristics of Protein-Substrate Interaction in Pimaricin Thioesterase. International Journal of Molecular Sciences. 20. PMID 30781619 DOI: 10.3390/ijms20040877  0.48
2019 Han Z, Ren X, Huang Q, Shi T, Lai Y, Zhao YL. Lipopolysaccharides inhibit REG3A self-aggregation on gold nanoparticles: A combined study of multivariate analysis on time-resolved local-surface-plasmon-resonance spectra and molecular modeling. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 30726670 DOI: 10.1021/acs.langmuir.9b00087  0.48
2019 Liang B, Gao Y, Xu J, Song Y, Xuan L, Shi T, Wang N, Hou Z, Zhao YL, Huang WE, Chen ZJ. Raman profiling of embryo culture medium to identify aneuploid and euploid embryos. Fertility and Sterility. PMID 30683589 DOI: 10.1016/j.fertnstert.2018.11.036  0.64
2018 Liu L, Fan S, Li W, Tao W, Shi T, Zhao YL. Theoretical Investigation of the Structural Characteristics in Active State of Akt1 Kinase. Journal of Chemical Information and Modeling. PMID 30571108 DOI: 10.1021/acs.jcim.8b00506  0.48
2018 Liang B, Li H, He Q, Li H, Kong L, Xuan L, Xia Y, Shen J, Mao Y, Li Y, Wang T, Zhao YL. Enrichment of the fetal fraction in non-invasive prenatal screening reduces maternal background interference. Scientific Reports. 8: 17675. PMID 30518878 DOI: 10.1038/s41598-018-35738-0  0.52
2018 Liu G, Fu W, Zhang Z, He Y, Yu H, Wang Y, Wang X, Zhao YL, Deng Z, Wu G, He X. Structural basis for the recognition of sulfur in phosphorothioated DNA. Nature Communications. 9: 4689. PMID 30409991 DOI: 10.1038/s41467-018-07093-1  0.6
2018 Zhou J, Wang Y, Xu G, Wu L, Han R, Schwaneberg U, Rao Y, Zhao YL, Zhou J, Ni Y. Structural Insight into Enantioselective Inversion of an Alcohol Dehydrogenase Reveals a "Polar Gate" in Stereorecognition of Diaryl Ketones. Journal of the American Chemical Society. PMID 30247889 DOI: 10.1021/jacs.8b08640  0.4
2018 Zhang F, Wang Y, Jiang Q, Chen Q, Karthik L, Zhao YL, Li Z. Substrate selection of adenylation domains for nonribosomal peptide synthetase (NRPS) in bacillamide C biosynthesis by marine Bacillus atrophaeus C89. Journal of Industrial Microbiology & Biotechnology. PMID 29572612 DOI: 10.1007/s10295-018-2028-2  0.48
2018 Pang S, Sun Y, Wu L, Yang L, Zhao YL, Wang Z, Li Y. Reconstruction of kidney renal clear cell carcinoma evolution across pathological stages. Scientific Reports. 8: 3339. PMID 29463849 DOI: 10.1038/s41598-018-20321-4  0.4
2017 Wang WF, Yan L, Liu Z, Liu LX, Lin J, Liu ZY, Chen XP, Zhang W, Xu ZZ, Shi T, Li JM, Zhao YL, Meng G, Xia Y, Li JY, et al. HSP70-Hrd1 axis precludes the oncorepressor potential of N-terminal misfolded Blimp-1s in lymphoma cells. Nature Communications. 8: 363. PMID 28842558 DOI: 10.1038/s41467-017-00476-w  0.48
2017 Wu T, Huang Q, Wang XL, Shi T, Bai L, Liang J, Wang Z, Deng Z, Zhao YL. Mechanistic Investigation on ROS Resistance of Phosphorothioated DNA. Scientific Reports. 7: 42823. PMID 28216673 DOI: 10.1038/srep42823  0.48
2017 Lu J, Zhang P, Zou X, Zhao X, Cheng K, Zhao Y, Bi Y, Zheng M, Luo X. In silico prediction of chemical toxicity profile using local lazy learning. Combinatorial Chemistry & High Throughput Screening. PMID 28215144 DOI: 10.2174/1386207320666170217151826  0.52
2016 Zhao Z, Shi T, Xu M, Brock NL, Zhao YL, Wang Y, Deng Z, Pang X, Tao M. Hybrubins: Bipyrrole Tetramic Acids Obtained by Crosstalk between a Truncated Undecylprodigiosin Pathway and Heterologous Tetramic Acid Biosynthetic Genes. Organic Letters. PMID 26800378 DOI: 10.1021/acs.orglett.5b03609  0.6
2015 Dong YZ, Yang L, Lu T, Zhao HX, Ma C, Zhao YL. Effects of exogenous neurotrophin-3 on myocyte apoptosis and Ca(2+)-ATP enzyme levels following nerve injury in rats. International Journal of Clinical and Experimental Medicine. 8: 19635-41. PMID 26770627  0.32
2015 Qi YB, Wang XL, Shi T, Liu S, Xu ZH, Li X, Shi X, Xu P, Zhao YL. Multicomponent kinetic analysis and theoretical studies on the phenolic intermediates in the oxidation of eugenol and isoeugenol catalyzed by laccase. Physical Chemistry Chemical Physics : Pccp. PMID 26477512 DOI: 10.1039/c5cp03475b  0.96
2015 Huang Y, Tian M, Zhang Y, Sheng G, Chen Z, Ma Y, Chen Y, Peng Y, Zhao YL, Wang Y, Zhang L, Yang Z. d-Isonucleotide (isoNA) incorporation around cleavage site of passenger strand promotes the vibration of Ago2-PAZ domain and enhances in vitro potency of siRNA. Organic & Biomolecular Chemistry. PMID 26313718 DOI: 10.1039/c5ob01119a  0.96
2015 Chen L, Wang XL, Shi T, Wu T, Deng Z, Zhao YL. Theoretical study on the relationship between Rp-phosphorothioation and base-step in S-DNA: based on energetic and structural analysis. The Journal of Physical Chemistry. B. 119: 474-81. PMID 25519472 DOI: 10.1021/jp511359e  0.48
2014 Cheng S, Shi T, Wang XL, Liang J, Wu H, Xie L, Li Y, Zhao YL. Features of S-nitrosylation based on statistical analysis and molecular dynamics simulation: cysteine acidity, surrounding basicity, steric hindrance and local flexibility. Molecular Biosystems. 10: 2597-606. PMID 25030274 DOI: 10.1039/c4mb00322e  0.48
2014 Liu K, Wen Y, Shi T, Li Y, Li F, Zhao YL, Huang C, Yi T. DNA gated photochromism and fluorescent switch in a thiazole orange modified diarylethene. Chemical Communications (Cambridge, England). 50: 9141-4. PMID 24989898 DOI: 10.1039/c4cc02783c  0.48
2014 Zhao Y, Li Y, Hu B, He X, Huang J, Zhan M, Lu L. [Clinical application of serum Golgi protein 73 in the diagnosis and progress of hepatocellular carcinoma]. Zhonghua Yi Xue Za Zhi. 94: 390-2. PMID 24746091  0.32
2014 Zhang G, Zhang W, Zhang Q, Shi T, Ma L, Zhu Y, Li S, Zhang H, Zhao YL, Shi R, Zhang C. Mechanistic insights into polycycle formation by reductive cyclization in ikarugamycin biosynthesis. Angewandte Chemie (International Ed. in English). 53: 4840-4. PMID 24706593 DOI: 10.1002/anie.201402078  0.96
2014 Wu G, Chen D, Tang H, Ren Y, Chen Q, Lv Y, Zhang Z, Zhao YL, Yao Y, Xu P. Structural insights into the specific recognition of N-heterocycle biodenitrogenation-derived substrates by microbial amide hydrolases. Molecular Microbiology. 91: 1009-21. PMID 24397579 DOI: 10.1111/mmi.12511  0.6
2013 Zhao YL, Yang LB, Geng XL, Zhou QL, Qin H, Yang L, Dong YZ, Zhong JJ. The association of XPG and MMS19L polymorphisms response to chemotherapy in osteosarcoma. Pakistan Journal of Medical Sciences. 29: 1225-9. PMID 24353725  0.32
2013 Cheng S, Lian B, Liang J, Shi T, Xie L, Zhao YL. Site selectivity for protein tyrosine nitration: insights from features of structure and topological network. Molecular Biosystems. 9: 2860-8. PMID 24056708 DOI: 10.1039/c3mb70260j  0.48
2013 Yang H, Zhou XJ, Zhang MM, Zheng XN, Zhao YL, Wang J. Changes in spontaneous brain activity in early Parkinson's disease. Neuroscience Letters. 549: 24-8. PMID 23769726 DOI: 10.1016/j.neulet.2013.05.080  0.32
2013 Sun XH, Hou WG, Zhao HX, Zhao YL, Ma C, Liu Y. Single nucleotide polymorphisms in the NER pathway and clinical outcome of patients with bone malignant tumors. Asian Pacific Journal of Cancer Prevention : Apjcp. 14: 2049-52. PMID 23679317  0.32
2013 Yuwen L, Zhang FL, Chen QH, Lin SJ, Zhao YL, Li ZY. The role of aromatic L-amino acid decarboxylase in bacillamide C biosynthesis by Bacillus atrophaeus C89. Scientific Reports. 3: 1753. PMID 23628927 DOI: 10.1038/srep01753  0.36
2013 Chen D, Tang H, Lv Y, Zhang Z, Shen K, Lin K, Zhao YL, Wu G, Xu P. Structural and computational studies of the maleate isomerase from Pseudomonas putida S16 reveal a breathing motion wrapping the substrate inside. Molecular Microbiology. 87: 1237-44. PMID 23347155 DOI: 10.1111/mmi.12163  0.6
2012 Zhang YC, Liang J, Lian P, Han Y, Chen Y, Bai L, Wang Z, Liang J, Deng Z, Zhao YL. Theoretical study on steric effects of DNA phosphorothioation: B-helical destabilization in Rp-phosphorothioated DNA. The Journal of Physical Chemistry. B. 116: 10639-48. PMID 22857608 DOI: 10.1021/jp302494b  0.48
2012 Zhang J, Wang R, Zhao YL, Sun XH, Zhao HX, Tan L, Chen DC, Hai-Bin X. Efficacy of intravenous zoledronic acid in the prevention and treatment of osteoporosis: a meta-analysis. Asian Pacific Journal of Tropical Medicine. 5: 743-8. PMID 22805729 DOI: 10.1016/S1995-7645(12)60118-7  0.4
2012 Xie X, Liang J, Pu T, Xu F, Yao F, Yang Y, Zhao YL, You D, Zhou X, Deng Z, Wang Z. Phosphorothioate DNA as an antioxidant in bacteria. Nucleic Acids Research. 40: 9115-24. PMID 22772986 DOI: 10.1093/nar/gks650  0.48
2012 Xu MJ, Liu XJ, Zhao YL, Liu D, Xu ZH, Lang XM, Ao P, Lin WH, Yang SL, Zhang ZG, Xu J. Identification and characterization of an anti-fibrotic benzopyran compound isolated from mangrove-derived Streptomyces xiamenensis. Marine Drugs. 10: 639-54. PMID 22611360 DOI: 10.3390/md10030639  0.64
2010 Li XL, Xu MJ, Zhao YL, Xu J. A novel benzo[f][1,7]naphthyridine produced by Streptomyces albogriseolus from mangrove sediments. Molecules (Basel, Switzerland). 15: 9298-307. PMID 21160454 DOI: 10.3390/molecules15129298  0.64
2010 Cao HY, Zhao YL, Zheng XN, Xu XJ, Kong DX, Zhang MM. [Role of activated brain regions during tactile stimulation in early Parkinson's disease: a preliminary fMRI study]. Zhejiang Da Xue Xue Bao. Yi Xue Ban = Journal of Zhejiang University. Medical Sciences. 39: 136-42. PMID 20387240  0.32
2010 Xu JF, Xu XJ, Wang QD, Zhao YL, Kong DX, Zhang MM. [MRI scan of striatum volume in healthy adults]. Zhejiang Da Xue Xue Bao. Yi Xue Ban = Journal of Zhejiang University. Medical Sciences. 39: 130-5. PMID 20387239  0.32
2009 Zhao YL, Cheng JL, Zhang MM. [Hard nut to crack in diagnosis of pituitary hyperplasia secondary to primary hypothyroidism and reasons of misdiagnosis]. Zhonghua Yi Xue Za Zhi. 89: 680-2. PMID 19595062  0.32
2009 Zhao YL, Flora JW, Thweatt WD, Garrison SL, Gonzalez C, Houk KN, Marquez M. Phosphine polymerization by nitric oxide: experimental characterization and theoretical predictions of mechanism. Inorganic Chemistry. 48: 1223-31. PMID 19102679 DOI: 10.1021/ic801917a  0.96
2009 Penoni A, Palmisano G, Zhao YL, Houk KN, Volkman J, Nicholas KM. On the mechanism of nitrosoarene-alkyne cycloaddition. Journal of the American Chemical Society. 131: 653-61. PMID 19093864 DOI: 10.1021/ja806715u  0.44
2009 Bartalis J, Zhao YL, Flora JW, Paine JB, Wooten JB. Carbon-centered radicals in cigarette smoke: acyl and alkylaminocarbonyl radicals. Analytical Chemistry. 81: 631-41. PMID 19093757 DOI: 10.1021/ac801969f  0.96
2008 Wu YD, Han W, Wang DP, Gao Y, Zhao YL. Theoretical analysis of secondary structures of beta-peptides. Accounts of Chemical Research. 41: 1418-27. PMID 18828608 DOI: 10.1021/ar800070b  0.96
2007 Dechancie J, Clemente FR, Smith AJ, Gunaydin H, Zhao YL, Zhang X, Houk KN. How similar are enzyme active site geometries derived from quantum mechanical theozymes to crystal structures of enzyme-inhibitor complexes? Implications for enzyme design. Protein Science : a Publication of the Protein Society. 16: 1851-66. PMID 17766382 DOI: 10.1110/ps.072963707  0.44
2007 Zhao YL, Laufer AH, Halpern JB, Fahr A. Hydrogen migration and vinylidene pathway for formation of methane in the 193 nm photodissociation of propene: CH3CH=CH2 and CD3CD=CD2. The Journal of Physical Chemistry. A. 111: 8330-5. PMID 17685497 DOI: 10.1021/jp072475j  0.96
2007 Zhao YL, Garrison SL, Gonzalez C, Thweatt WD, Marquez M. N-nitrosation of amines by NO2 and NO: a theoretical study. The Journal of Physical Chemistry. A. 111: 2200-5. PMID 17388303 DOI: 10.1021/jp0677703  0.96
2006 Zhao YL, Suhrada CP, Jung ME, Houk KN. Theoretical investigation of the stereoselective stepwise cope rearrangement of a 3-vinylmethylenecyclobutane. Journal of the American Chemical Society. 128: 11106-13. PMID 16925428 DOI: 10.1021/ja060913e  0.96
2006 Zhao YL, Houk KN. Thionitroxides, RSNHO*: the structure of the SNO moiety in "S-Nitrosohemoglobin", a possible NO reservoir and transporter. Journal of the American Chemical Society. 128: 1422-3. PMID 16448092 DOI: 10.1021/ja057097f  0.44
2005 Zhao YL, McCarren PR, Houk KN, Choi BY, Toone EJ. Nitrosonium-catalyzed decomposition of s-nitrosothiols in solution: a theoretical and experimental study. Journal of the American Chemical Society. 127: 10917-24. PMID 16076198 DOI: 10.1021/ja050018f  0.96
2005 Palmer LC, Zhao YL, Houk KN, Rebek J. Diastereoselection of chiral acids in a cylindrical capsule. Chemical Communications (Cambridge, England). 3667-9. PMID 16027905 DOI: 10.1039/b503313f  0.44
2005 Zhao YL, Bartberger MD, Goto K, Shimada K, Kawashima T, Houk KN. Theoretical evidence for enhanced NO dimerization in aromatic hosts: implications for the role of the electrophile (NO)(2) in nitric oxide chemistry. Journal of the American Chemical Society. 127: 7964-5. PMID 15926791 DOI: 10.1021/ja042247s  0.44
2004 Zhao YL, Houk KN, Rechavi D, Scarso A, Rebek J. Equilibrium isotope effects as a probe of nonbonding attractions. Journal of the American Chemical Society. 126: 11428-9. PMID 15366875 DOI: 10.1021/ja0471065  0.44
2002 Zhao YL, Wu YD. A theoretical study of beta-sheet models: is the formation of hydrogen-bond networks cooperative? Journal of the American Chemical Society. 124: 1570-1. PMID 11853419 DOI: 10.1021/ja016230a  0.96
2001 Wu YD, Zhao YL. A theoretical study on the origin of cooperativity in the formation of 3(10)- and alpha-helices. Journal of the American Chemical Society. 123: 5313-9. PMID 11457394 DOI: 10.1021/ja003482n  0.96
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