| Year |
Citation |
Score |
| 2023 |
Wang S, Valdiviez L, Ye H, Fiehn O. Automatic Assignment of Molecular Ion Species to Elemental Formulas in Gas Chromatography/Methane Chemical Ionization Accurate Mass Spectrometry. Metabolites. 13. PMID 37623905 DOI: 10.3390/metabo13080962 |
0.795 |
|
| 2022 |
Wang S, Kind T, Bremer PL, Tantillo DJ, Fiehn O. Beyond the Ground State: Predicting Electron Ionization Mass Spectra Using Excited-State Molecular Dynamics. Journal of Chemical Information and Modeling. 62: 4403-4410. PMID 36107950 DOI: 10.1021/acs.jcim.2c00597 |
0.763 |
|
| 2022 |
Bremer PL, Vaniya A, Kind T, Wang S, Fiehn O. How Well Can We Predict Mass Spectra from Structures? Benchmarking Competitive Fragmentation Modeling for Metabolite Identification on Untrained Tandem Mass Spectra. Journal of Chemical Information and Modeling. PMID 36043939 DOI: 10.1021/acs.jcim.2c00936 |
0.798 |
|
| 2022 |
Lee J, Kind T, Tantillo DJ, Wang LP, Fiehn O. Evaluating the Accuracy of the QCEIMS Approach for Computational Prediction of Electron Ionization Mass Spectra of Purines and Pyrimidines. Metabolites. 12. PMID 35050190 DOI: 10.3390/metabo12010068 |
0.503 |
|
| 2022 |
Wang S, Kind T, Bremer PL, Tantillo DJ, Fiehn O. Quantum Chemical Prediction of Electron Ionization Mass Spectra of Trimethylsilylated Metabolites. Analytical Chemistry. 94: 1559-1566. PMID 35006668 DOI: 10.1021/acs.analchem.1c02838 |
0.799 |
|
| 2022 |
Fiehn O. Extending the breadth of metabolite profiling by gas chromatography coupled to mass spectrometry. Trends in Analytical Chemistry : Trac. 27: 261-269. PMID 18497891 DOI: 10.1016/j.trac.2008.01.007 |
0.318 |
|
| 2021 |
Borges RM, Colby SM, Das S, Edison AS, Fiehn O, Kind T, Lee J, Merrill AT, Merz KM, Metz TO, Nunez JR, Tantillo DJ, Wang LP, Wang S, Renslow RS. Quantum Chemistry Calculations for Metabolomics. Chemical Reviews. PMID 33979149 DOI: 10.1021/acs.chemrev.0c00901 |
0.773 |
|
| 2021 |
Zhang Y, Gao B, Valdiviez L, Zhu C, Gallagher T, Whiteson K, Fiehn O. Comparing Stable Isotope Enrichment by Gas Chromatography with Time-of-Flight, Quadrupole Time-of-Flight, and Quadrupole Mass Spectrometry. Analytical Chemistry. PMID 33434014 DOI: 10.1021/acs.analchem.0c04013 |
0.323 |
|
| 2020 |
Wang S, Kind T, Tantillo DJ, Fiehn O. Predicting in silico electron ionization mass spectra using quantum chemistry. Journal of Cheminformatics. 12: 63. PMID 33372633 DOI: 10.1186/s13321-020-00470-3 |
0.79 |
|
| 2020 |
Oliver A, LaMere B, Weihe C, Wandro S, Lindsay KL, Wadhwa PD, Mills DA, Pride DT, Fiehn O, Northen T, de Raad M, Li H, Martiny JBH, Lynch S, Whiteson K. Cervicovaginal Microbiome Composition Is Associated with Metabolic Profiles in Healthy Pregnancy. Mbio. 11. PMID 32843557 DOI: 10.1128/Mbio.01851-20 |
0.359 |
|
| 2020 |
Tsugawa H, Ikeda K, Takahashi M, Satoh A, Mori Y, Uchino H, Okahashi N, Yamada Y, Tada I, Bonini P, Higashi Y, Okazaki Y, Zhou Z, Zhu ZJ, Koelmel J, ... ... Fiehn O, et al. A lipidome atlas in MS-DIAL 4. Nature Biotechnology. PMID 32541957 DOI: 10.1038/S41587-020-0531-2 |
0.398 |
|
| 2020 |
Bonini P, Kind T, Tsugawa H, Barupal DK, Fiehn O. Retip: retention time prediction for compound annotation in untargeted metabolomics. Analytical Chemistry. PMID 32390414 DOI: 10.1021/Acs.Analchem.9B05765 |
0.374 |
|
| 2020 |
Karunanithi PS, Berrios DI, Wang S, Davis J, Shen T, Fiehn O, Maloof JN, Zerbe P. The foxtail millet (Setaria italica) terpene synthase gene family. The Plant Journal : For Cell and Molecular Biology. PMID 32282967 DOI: 10.1111/Tpj.14771 |
0.311 |
|
| 2020 |
Ding J, Kind T, Zhu QF, Wang Y, Yan JW, Fiehn O, Feng YQ. An in-silico generated library for sensitive detection of 2-dimethylaminoethylamine derivatized FAHFA lipids using high-resolution tandem mass spectrometry. Analytical Chemistry. PMID 32202765 DOI: 10.1021/Acs.Analchem.0C00172 |
0.394 |
|
| 2020 |
Mukherjee A, Chiang CY, Daifotis HA, Nieman KM, Fahrmann JF, Lastra RR, Romero IL, Fiehn O, Lengyel E. Adipocyte-induced FABP4 expression in ovarian cancer cells promotes metastasis and mediates carboplatin resistance. Cancer Research. PMID 32054768 DOI: 10.1158/0008-5472.Can-19-1999 |
0.319 |
|
| 2020 |
Li Q, Parikh H, Butterworth MD, Lernmark Å, Hagopian W, Rewers M, She JX, Toppari J, Ziegler AG, Akolkar B, Fiehn O, Fan S, Krischer JP. Longitudinal Metabolome-Wide Signals Prior to the Appearance of a First Islet Autoantibody in Children Participating in the TEDDY Study. Diabetes. PMID 32029481 DOI: 10.2337/Db19-0756 |
0.319 |
|
| 2020 |
Hussein AM, Wang Y, Mathieu J, Margaretha L, Song C, Jones DC, Cavanaugh C, Miklas JW, Mahen E, Showalter MR, Ruzzo WL, Fiehn O, Ware CB, Blau CA, Ruohola-Baker H. Metabolic Control over mTOR-Dependent Diapause-like State. Developmental Cell. 52: 236-250.e7. PMID 31991105 DOI: 10.1016/J.Devcel.2019.12.018 |
0.323 |
|
| 2019 |
Ismail IT, Showalter MR, Fiehn O. Inborn Errors of Metabolism in the Era of Untargeted Metabolomics and Lipidomics. Metabolites. 9. PMID 31640247 DOI: 10.3390/Metabo9100242 |
0.359 |
|
| 2019 |
Thompson JW, Adams KJ, Adamski J, Asad Y, Borts D, Bowden JA, Byram G, Dang VD, Dunn WB, Fernandez FM, Fiehn O, Gaul DA, Huhmer A, Kalli A, Koal T, et al. International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis. Analytical Chemistry. PMID 31638379 DOI: 10.1021/Acs.Analchem.9B02908 |
0.329 |
|
| 2019 |
Johnson RK, Vanderlinden L, DeFelice BC, Kechris K, Uusitalo U, Fiehn O, Sontag M, Crume T, Beyerlein A, Lernmark Å, Toppari J, Ziegler AG, She JX, Hagopian W, Rewers M, et al. Metabolite-related dietary patterns and the development of islet autoimmunity. Scientific Reports. 9: 14819. PMID 31616039 DOI: 10.1038/S41598-019-51251-4 |
0.313 |
|
| 2019 |
Eiben CB, de Rond T, Bloszies C, Gin J, Chiniquy J, Baidoo EEK, Petzold CJ, Hillson NJ, Fiehn O, Keasling JD. Mevalonate Pathway Promiscuity Enables Noncanonical Terpene Production. Acs Synthetic Biology. PMID 31576747 DOI: 10.1021/Acssynbio.9B00230 |
0.308 |
|
| 2019 |
Grapov D, Fiehn O, Campbell C, Chandler CJ, Burnett DJ, Souza EC, Casazza GA, Keim NL, Newman JW, Hunter GR, Fernandez JR, Garvey WT, Hoppel CL, Harper ME, Adams SH. Exercise plasma metabolomics and xenometabolomics in obese, sedentary, insulin-resistant women: impact of a fitness and weight loss intervention. American Journal of Physiology. Endocrinology and Metabolism. PMID 31526287 DOI: 10.1152/Ajpendo.00091.2019 |
0.314 |
|
| 2019 |
Barupal DK, Baillie R, Fan S, Saykin AJ, Meikle PJ, Arnold M, Nho K, Fiehn O, Kaddurah-Daouk R. Sets of coregulated serum lipids are associated with Alzheimer's disease pathophysiology. Alzheimer's & Dementia (Amsterdam, Netherlands). 11: 619-627. PMID 31517024 DOI: 10.1016/J.Dadm.2019.07.002 |
0.302 |
|
| 2019 |
Maruvada P, Lampe JW, Wishart DS, Barupal D, Chester DN, Dodd D, Djoumbou-Feunang Y, Dorrestein PC, Dragsted LO, Draper J, Duffy LC, Dwyer JT, Emenaker NJ, Fiehn O, Gerszten RE, et al. Perspective: Dietaryiomarkers of Intake and Exposure-Exploration with Omics Approaches. Advances in Nutrition (Bethesda, Md.). PMID 31386148 DOI: 10.1093/Advances/Nmz075 |
0.3 |
|
| 2019 |
Barupal DK, Gao B, Budczies J, Phinney BS, Perroud B, Denkert C, Fiehn O. Prioritization of metabolic genes as novel therapeutic targets in estrogen-receptor negative breast tumors using multi-omics data and text mining. Oncotarget. 10: 3894-3909. PMID 31231467 DOI: 10.18632/Oncotarget.26995 |
0.321 |
|
| 2019 |
Barupal DK, Zhang Y, Shen T, Fan S, Roberts BS, Fitzgerald P, Wancewicz B, Valdiviez L, Wohlgemuth G, Byram G, Choy YY, Haffner B, Showalter MR, Vaniya A, Bloszies CS, ... ... Fiehn O, et al. A Comprehensive Plasma Metabolomics Dataset for a Cohort of Mouse Knockouts within the International Mouse Phenotyping Consortium. Metabolites. 9. PMID 31121816 DOI: 10.3390/Metabo9050101 |
0.388 |
|
| 2019 |
Xia Y, Ye B, Ding J, Yu Y, Alptekin A, Thangaraju M, Prasad PD, Ding ZC, Park EJ, Choi JH, Gao B, Fiehn O, Yan C, Dong Z, Zha Y, et al. Metabolic reprogramming by MYCN confers dependence on the serine-glycine-one-carbon biosynthetic pathway. Cancer Research. PMID 31088832 DOI: 10.1158/0008-5472.Can-18-3541 |
0.326 |
|
| 2019 |
Karunanithi PS, Dhanota P, Addison JB, Tong S, Fiehn O, Zerbe P. Functional characterization of the cytochrome P450 monooxygenase CYP71AU87 indicates a role in marrubiin biosynthesis in the medicinal plant Marrubium vulgare. Bmc Plant Biology. 19: 114. PMID 30909879 DOI: 10.1186/S12870-019-1702-5 |
0.32 |
|
| 2019 |
Hook V, Kind T, Podvin S, Palazoglu M, Tran C, Toneff T, Samra S, Lietz C, Fiehn O. Metabolomics Analyses of 14 Classical Neurotransmitters by GC-TOF with LC-MS Illustrates Secretion of 9 Cell-Cell Signaling Molecules from Sympathoadrenal Chromaffin Cells in the Presence of Lithium. Acs Chemical Neuroscience. PMID 30698015 DOI: 10.1021/Acschemneuro.8B00432 |
0.368 |
|
| 2019 |
DeFelice BC, Fiehn O. Rapid LC-MS/MS quantification of cancer related acetylated polyamines in human biofluids. Talanta. 196: 415-419. PMID 30683386 DOI: 10.1016/J.Talanta.2018.12.074 |
0.313 |
|
| 2019 |
Amini H, Naghavi MR, Shen T, Wang Y, Nasiri J, Khan IA, Fiehn O, Zerbe P, Maloof JN. Tissue-Specific Transcriptome Analysis Reveals Candidate Genes for Terpenoid and Phenylpropanoid Metabolism in the Medicinal Plant . G3 (Bethesda, Md.). PMID 30679248 DOI: 10.1534/G3.118.200852 |
0.341 |
|
| 2019 |
Blaženović I, Kind T, Sa MR, Ji J, Vaniya A, Wancewicz B, Roberts BS, Torbasinovic H, Lee T, Mehta SS, Showalter MR, Song H, Kwok JF, Jahn D, Kim J, ... Fiehn O, et al. Structure annotation of all mass spectra in untargeted metabolomics. Analytical Chemistry. PMID 30608141 DOI: 10.1021/Acs.Analchem.8B04698 |
0.434 |
|
| 2018 |
Barupal DK, Fan S, Wancewicz B, Cajka T, Sa M, Showalter MR, Baillie R, Tenenbaum JD, Louie G, Kaddurah-Daouk R, Fiehn O. Generation and quality control of lipidomics data for the alzheimer's disease neuroimaging initiative cohort. Scientific Data. 5: 180263. PMID 30457571 DOI: 10.1038/Sdata.2018.263 |
0.314 |
|
| 2018 |
Zhang J, Bhattacharyya S, Hickner RC, Light AR, Lambert CJ, Gale BK, Fiehn O, Adams SH. Skeletal muscle interstitial fluid metabolomics at rest and associated with an exercise bout: application in rats and humans. American Journal of Physiology. Endocrinology and Metabolism. PMID 30398905 DOI: 10.1152/Ajpendo.00156.2018 |
0.303 |
|
| 2018 |
Gifford I, Battenberg K, Vaniya A, Wilson A, Tian L, Fiehn O, Berry AM. Distinctive Patterns of Flavonoid Biosynthesis in Roots and Nodules of and Revealed by Metabolomic and Gene Expression Profiles. Frontiers in Plant Science. 9: 1463. PMID 30364174 DOI: 10.3389/Fpls.2018.01463 |
0.331 |
|
| 2018 |
La Frano M, Fahrmann J, Grapov D, Pedersen T, Newman JW, Fiehn O, Underwood MA, Mestan KK, Steinhorn R, Wedgwood S. Umbilical Cord Blood Metabolomics Reveal Distinct Signatures of Dyslipidemia Prior to Bronchopulmonary Dysplasia and Pulmonary Hypertension. American Journal of Physiology. Lung Cellular and Molecular Physiology. PMID 30113229 DOI: 10.1152/Ajplung.00283.2017 |
0.304 |
|
| 2018 |
Becker-Kettern J, Paczia N, Conrotte JF, Zhu C, Fiehn O, Jung PP, Steinmetz LM, Linster CL. NAD(P)HX repair deficiency causes central metabolic perturbations in yeast and human cells. The Febs Journal. PMID 30098110 DOI: 10.1111/Febs.14631 |
0.302 |
|
| 2018 |
Blaženović I, Shen T, Mehta SS, Kind T, Ji J, Piparo M, Cacciola F, Mondello L, Fiehn O. Increasing Compound Identification Rates in Untargeted Lipidomics Research with Liquid Chromatography Drift Time-Ion Mobility Mass Spectrometry. Analytical Chemistry. PMID 30096227 DOI: 10.1021/Acs.Analchem.8B01527 |
0.399 |
|
| 2018 |
Fan S, Yeon A, Shahid M, Anger JT, Eilber KS, Fiehn O, Kim J. Sex-associated differences in baseline urinary metabolites of healthy adults. Scientific Reports. 8: 11883. PMID 30089834 DOI: 10.1038/S41598-018-29592-3 |
0.308 |
|
| 2018 |
Maixner F, Turaev D, Cazenave-Gassiot A, Janko M, Krause-Kyora B, Hoopmann MR, Kusebauch U, Sartain M, Guerriero G, O'Sullivan N, Teasdale M, Cipollini G, Paladin A, Mattiangeli V, Samadelli M, ... ... Fiehn O, et al. The Iceman's Last Meal Consisted of Fat, Wild Meat, and Cereals. Current Biology : Cb. PMID 30017480 DOI: 10.1016/J.Cub.2018.05.067 |
0.734 |
|
| 2018 |
Blaženović I, Kind T, Ji J, Fiehn O. Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics. Metabolites. 8. PMID 29748461 DOI: 10.3390/Metabo8020031 |
0.418 |
|
| 2018 |
Niehaus TD, Folz J, McCarty DR, Cooper AJL, Moraga Amador D, Fiehn O, Hanson AD. Identification of a metabolic disposal route for the oncometabolite-(2-succino)cysteine in. The Journal of Biological Chemistry. PMID 29626092 DOI: 10.1074/Jbc.Ra118.002925 |
0.351 |
|
| 2018 |
Barupal DK, Fan S, Fiehn O. Integrating bioinformatics approaches for a comprehensive interpretation of metabolomics datasets. Current Opinion in Biotechnology. 54: 1-9. PMID 29413745 DOI: 10.1016/J.Copbio.2018.01.010 |
0.33 |
|
| 2018 |
Mukherjee A, Coscia F, Fahrmann J, Chiang C, Smith J, Nieman K, Ladanyi A, Romero I, Fiehn O, Mann M, Lengyel E. Abstract A15: Fatty acid binding protein 4 is indispensable for ovarian cancer metastasis Clinical Cancer Research. 24. DOI: 10.1158/1557-3265.Ovca17-A15 |
0.302 |
|
| 2018 |
Bloszies CS, Fiehn O. Using untargeted metabolomics for detecting exposome compounds Current Opinion in Toxicology. 8: 87-92. DOI: 10.1016/J.Cotox.2018.03.002 |
0.328 |
|
| 2018 |
Higgins BT, Wang Q, Du S, Hennebelle M, Taha AY, Fiehn O, VanderGheynst JS. Impact of thiamine metabolites and spent medium from Chlorella sorokiniana on metabolism in the green algae Auxenochlorella prototheciodes Algal Research. 33: 197-208. DOI: 10.1016/J.Algal.2018.05.019 |
0.343 |
|
| 2017 |
Vaniya A, Samra SN, Palazoglu M, Tsugawa H, Fiehn O. Using MS-FINDER for identifying 19 natural products in the CASMI 2016 contest. Phytochemistry Letters. 21: 306-312. PMID 31576201 DOI: 10.1016/J.Phytol.2016.12.008 |
0.367 |
|
| 2017 |
Kind T, Fiehn O. Strategies for dereplication of natural compounds using high-resolution tandem mass spectrometry. Phytochemistry Letters. 21: 313-319. PMID 29225718 DOI: 10.1016/J.Phytol.2016.11.006 |
0.398 |
|
| 2017 |
Lai Z, Tsugawa H, Wohlgemuth G, Mehta S, Mueller M, Zheng Y, Ogiwara A, Meissen J, Showalter M, Takeuchi K, Kind T, Beal P, Arita M, Fiehn O. Identifying metabolites by integrating metabolome databases with mass spectrometry cheminformatics. Nature Methods. PMID 29176591 DOI: 10.1038/Nmeth.4512 |
0.779 |
|
| 2017 |
Fong LY, Jing R, Smalley KJ, Taccioli C, Fahrmann J, Barupal DK, Alder H, Farber JL, Fiehn O, Croce CM. Integration of metabolomics, transcriptomics, and microRNA expression profiling reveals a miR-143-HK2-glucose network underlying zinc-deficiency-associated esophageal neoplasia. Oncotarget. 8: 81910-81925. PMID 29137232 DOI: 10.18632/Oncotarget.18434 |
0.303 |
|
| 2017 |
Barupal DK, Fiehn O. Chemical Similarity Enrichment Analysis (ChemRICH) as alternative to biochemical pathway mapping for metabolomic datasets. Scientific Reports. 7: 14567. PMID 29109515 DOI: 10.1038/S41598-017-15231-W |
0.363 |
|
| 2017 |
Blaženović I, Kind T, Torbašinović H, Obrenović S, Mehta SS, Tsugawa H, Wermuth T, Schauer N, Jahn M, Biedendieck R, Jahn D, Fiehn O. Comprehensive comparison of in silico MS/MS fragmentation tools of the CASMI contest: database boosting is needed to achieve 93% accuracy. Journal of Cheminformatics. 9: 32. PMID 29086039 DOI: 10.1186/S13321-017-0219-X |
0.381 |
|
| 2017 |
Cajka T, Smilowitz JT, Fiehn O. Validating quantitative untargeted lipidomics across nine liquid chromatography-high-resolution mass spectrometry platforms. Analytical Chemistry. PMID 29064229 DOI: 10.1021/Acs.Analchem.7B03404 |
0.398 |
|
| 2017 |
Lai Z, Kind T, Fiehn O. Using Accurate Mass Gas Chromatography - Mass Spectrometry with the MINE Database for Epimetabolite Annotation. Analytical Chemistry. PMID 28876899 DOI: 10.1021/Acs.Analchem.7B01134 |
0.444 |
|
| 2017 |
Cajka T, Fiehn O. LC-MS-Based Lipidomics and Automated Identification of Lipids Using the LipidBlast In-Silico MS/MS Library. Methods in Molecular Biology (Clifton, N.J.). 1609: 149-170. PMID 28660581 DOI: 10.1007/978-1-4939-6996-8_14 |
0.367 |
|
| 2017 |
Lu W, Su X, Klein MS, Lewis IA, Fiehn O, Rabinowitz JD. Metabolite Measurement: Pitfalls to Avoid and Practices to Follow. Annual Review of Biochemistry. 86: 277-304. PMID 28654323 DOI: 10.1146/Annurev-Biochem-061516-044952 |
0.413 |
|
| 2017 |
Kind T, Tsugawa H, Cajka T, Ma Y, Lai Z, Mehta SS, Wohlgemuth G, Barupal DK, Showalter MR, Arita M, Fiehn O. Identification of small molecules using accurate mass MS/MS search. Mass Spectrometry Reviews. PMID 28436590 DOI: 10.1002/Mas.21535 |
0.381 |
|
| 2017 |
Cheng S, Shah SH, Corwin EJ, Fiehn O, Fitzgerald RL, Gerszten RE, Illig T, Rhee EP, Srinivas PR, Wang TJ, Jain M. Potential Impact and Study Considerations of Metabolomics in Cardiovascular Health and Disease: A Scientific Statement From the American Heart Association. Circulation. Cardiovascular Genetics. 10. PMID 28360086 DOI: 10.1161/Hcg.0000000000000032 |
0.352 |
|
| 2017 |
Defelice BC, Mehta SS, Samra S, Cajka T, Wancewicz B, Fahrmann JF, Fiehn O. Mass Spectral Feature List Optimizer (MS-FLO): a tool to minimize false positive peak reports in untargeted LC-MS data processing. Analytical Chemistry. PMID 28225594 DOI: 10.1021/Acs.Analchem.6B04372 |
0.369 |
|
| 2017 |
Showalter MR, Cajka T, Fiehn O. Epimetabolites: discovering metabolism beyond building and burning. Current Opinion in Chemical Biology. 36: 70-76. PMID 28213207 DOI: 10.1016/J.Cbpa.2017.01.012 |
0.368 |
|
| 2017 |
Mafu S, Karunanithi PS, Palazzo TA, Harrod BL, Rodriguez SM, Mollhoff IN, O'Brien TE, Tong S, Fiehn O, Tantillo DJ, Bohlmann J, Zerbe P. Biosynthesis of the microtubule-destabilizing diterpene pseudolaric acid B from golden larch involves an unusual diterpene synthase. Proceedings of the National Academy of Sciences of the United States of America. PMID 28096378 DOI: 10.1073/Pnas.1612901114 |
0.54 |
|
| 2016 |
Kind T, Cho E, Park TD, Deng N, Liu Z, Lee T, Fiehn O, Kim J. Interstitial Cystitis-Associated Urinary Metabolites Identified by Mass-Spectrometry Based Metabolomics Analysis. Scientific Reports. 6: 39227. PMID 27976711 DOI: 10.1038/Srep39227 |
0.333 |
|
| 2016 |
Jung SM, Hur YY, Preece JE, Fiehn O, Kim YH. Profiling of Disease-Related Metabolites in Grapevine Internode Tissues Infected with Agrobacterium vitis. The Plant Pathology Journal. 32: 489-499. PMID 27904455 DOI: 10.5423/Ppj.Ft.08.2016.0163 |
0.364 |
|
| 2016 |
Aguer C, Piccolo BD, Fiehn O, Adams SH, Harper ME. A novel amino acid and metabolomics signature in mice overexpressing muscle uncoupling protein 3. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. PMID 27871066 DOI: 10.1096/Fj.201600914R |
0.315 |
|
| 2016 |
Wohlgemuth G, Mehta SS, Mejia RF, Neumann S, Pedrosa D, Pluskal T, Schymanski EL, Willighagen EL, Wilson M, Wishart DS, Arita M, Dorrestein PC, Bandeira N, Wang M, Schulze T, ... ... Fiehn O, et al. SPLASH, a hashed identifier for mass spectra. Nature Biotechnology. 34: 1099-1101. PMID 27824832 DOI: 10.1038/Nbt.3689 |
0.347 |
|
| 2016 |
Barupal DK, Pinkerton KE, Hood C, Kind T, Fiehn O. Environmental tobacco smoke alters metabolic systems in adult rats. Chemical Research in Toxicology. PMID 27788581 DOI: 10.1021/Acs.Chemrestox.6B00187 |
0.315 |
|
| 2016 |
Cajka T, Garay LA, Sitepu IR, Boundy-Mills KL, Fiehn O. Multiplatform Mass Spectrometry-Based Approach Identifies Extracellular Glycolipids of the Yeast Rhodotorula babjevae UCDFST 04-877. Journal of Natural Products. PMID 27669091 DOI: 10.1021/Acs.Jnatprod.6B00497 |
0.393 |
|
| 2016 |
Beger RD, Dunn W, Schmidt MA, Gross SS, Kirwan JA, Cascante M, Brennan L, Wishart DS, Oresic M, Hankemeier T, Broadhurst DI, Lane AN, Suhre K, Kastenmüller G, Sumner SJ, ... ... Fiehn O, et al. Metabolomics enables precision medicine: "A White Paper, Community Perspective". Metabolomics : Official Journal of the Metabolomic Society. 12: 149. PMID 27642271 DOI: 10.1007/S11306-016-1094-6 |
0.349 |
|
| 2016 |
Lai Z, Fiehn O. Mass spectral fragmentation of trimethylsilylated small molecules. Mass Spectrometry Reviews. PMID 27580014 DOI: 10.1002/Mas.21518 |
0.42 |
|
| 2016 |
Tsugawa H, Kind T, Nakabayashi R, Yukihira D, Tanaka W, Cajka T, Saito K, Fiehn O, Arita M. Hydrogen rearrangement rules: computational MS/MS fragmentation and structure elucidation using MS-FINDER software. Analytical Chemistry. PMID 27419259 DOI: 10.1021/Acs.Analchem.6B00770 |
0.37 |
|
| 2016 |
Rotroff DM, Oki NO, Liang X, Yee SW, Stocker SL, Corum DG, Meisner M, Fiehn O, Motsinger-Reif AA, Giacomini KM, Kaddurah-Daouk R. Pharmacometabolomic Assessment of Metformin in Non-diabetic, African Americans. Frontiers in Pharmacology. 7: 135. PMID 27378919 DOI: 10.3389/Fphar.2016.00135 |
0.335 |
|
| 2016 |
Lerma-Ortiz C, Jeffryes JG, Cooper AJ, Niehaus TD, Thamm AM, Frelin O, Aunins T, Fiehn O, de Crécy-Lagard V, Henry CS, Hanson AD. 'Nothing of chemistry disappears in biology': the Top 30 damage-prone endogenous metabolites. Biochemical Society Transactions. 44: 961-71. PMID 27284066 DOI: 10.1042/Bst20160073 |
0.311 |
|
| 2016 |
Albrecht U, Fiehn O, Bowman KD. Metabolic variations in different citrus rootstock cultivars associated with different responses to Huanglongbing. Plant Physiology and Biochemistry : Ppb / Societe Francaise De Physiologie Vegetale. 107: 33-44. PMID 27236226 DOI: 10.1016/J.Plaphy.2016.05.030 |
0.334 |
|
| 2016 |
Fiehn O. Metabolomics by Gas Chromatography-Mass Spectrometry: Combined Targeted and Untargeted Profiling. Current Protocols in Molecular Biology / Edited by Frederick M. Ausubel ... [Et Al.]. 114: 30.4.1-30.4.32. PMID 27038389 DOI: 10.1002/0471142727.Mb3004S114 |
0.434 |
|
| 2016 |
Venkatesh TV, Chassy AW, Fiehn O, Flint-Garcia S, Zeng Q, Skogerson K, Harrigan GG. Metabolomic assessment of key maize resources: GC-MS and NMR profiling of grain from B73 hybrids of the nested association mapping (NAM) founders and of geographically diverse landraces. Journal of Agricultural and Food Chemistry. PMID 26923484 DOI: 10.1021/Acs.Jafc.5B04901 |
0.786 |
|
| 2016 |
Cajka T, Fiehn O. Toward Merging Untargeted and Targeted Methods in Mass Spectrometry-Based Metabolomics and Lipidomics. Analytical Chemistry. 88: 524-45. PMID 26637011 DOI: 10.1021/Acs.Analchem.5B04491 |
0.346 |
|
| 2016 |
Cajka T, Davis R, Austin KJ, Newman JW, German JB, Fiehn O, Smilowitz JT. Using a lipidomics approach for nutritional phenotyping in response to a test meal containing gamma-linolenic acid Metabolomics. 12. DOI: 10.1007/S11306-016-1075-9 |
0.312 |
|
| 2016 |
Pasamontes A, Cheung WHK, Simmons J, Aksenov AA, Peirano DJ, Grafton-Cardwell EE, Kapaun T, Dandekar AM, Fiehn O, Davis CE. Citrus tristeza virus infection in sweet orange trees and a mandarin × tangor cross alters low molecular weight metabolites assessed using gas chromatography mass spectrometry (GC/MS) Metabolomics. 12: 1-10. DOI: 10.1007/S11306-016-0959-Z |
0.387 |
|
| 2016 |
Cajka T, Fiehn O. Increasing lipidomic coverage by selecting optimal mobile-phase modifiers in LC–MS of blood plasma Metabolomics. 12: 1-11. DOI: 10.1007/S11306-015-0929-X |
0.302 |
|
| 2015 |
Ma Y, Tanaka N, Vaniya A, Kind T, Fiehn O. Ultrafast polyphenol metabolomics of red wines using microLC-MS/MS. Journal of Agricultural and Food Chemistry. PMID 26698107 DOI: 10.1021/Acs.Jafc.5B04890 |
0.383 |
|
| 2015 |
Ma Y, Kind T, Vaniya A, Gennity I, Fahrmann JF, Fiehn O. An in silico MS/MS library for automatic annotation of novel FAHFA lipids. Journal of Cheminformatics. 7: 53. PMID 26579213 DOI: 10.1186/S13321-015-0104-4 |
0.4 |
|
| 2015 |
Sud M, Fahy E, Cotter D, Azam K, Vadivelu I, Burant C, Edison A, Fiehn O, Higashi R, Nair KS, Sumner S, Subramaniam S. Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools. Nucleic Acids Research. PMID 26467476 DOI: 10.1093/Nar/Gkv1042 |
0.403 |
|
| 2015 |
Zeng H, Grapov D, Jackson MI, Fahrmann J, Fiehn O, Combs GF. Integrating Multiple Analytical Datasets to Compare Metabolite Profiles of Mouse Colonic-Cecal Contents and Feces. Metabolites. 5: 489-501. PMID 26378591 DOI: 10.3390/Metabo5030489 |
0.418 |
|
| 2015 |
Yang D, Song D, Kind T, Ma Y, Hoefkens J, Fiehn O. Lipidomic Analysis of Chlamydomonas reinhardtii under Nitrogen and Sulfur Deprivation. Plos One. 10: e0137948. PMID 26375463 DOI: 10.1371/Journal.Pone.0137948 |
0.367 |
|
| 2015 |
Jeffryes JG, Colastani RL, Elbadawi-Sidhu M, Kind T, Niehaus TD, Broadbelt LJ, Hanson AD, Fiehn O, Tyo KE, Henry CS. MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics. Journal of Cheminformatics. 7: 44. PMID 26322134 DOI: 10.1186/S13321-015-0087-1 |
0.409 |
|
| 2015 |
Abate-Pella D, Freund DM, Ma Y, Simón-Manso Y, Hollender J, Broeckling CD, Huhman DV, Krokhin OV, Stoll DR, Hegeman AD, Kind T, Fiehn O, Schymanski EL, Prenni JE, Sumner LW, et al. Retention projection enables accurate calculation of liquid chromatographic retention times across labs and methods. Journal of Chromatography. A. 1412: 43-51. PMID 26292625 DOI: 10.1016/J.Chroma.2015.07.108 |
0.329 |
|
| 2015 |
Vaniya A, Fiehn O. Using fragmentation trees and mass spectral trees for identifying unknown compounds in metabolomics. Trends in Analytical Chemistry : Trac. 69: 52-61. PMID 26213431 DOI: 10.1016/J.Trac.2015.04.002 |
0.414 |
|
| 2015 |
Meissen JK, Hirahatake KM, Adams SH, Fiehn O. Temporal metabolomic responses of cultured HepG2 liver cells to high fructose and high glucose exposures. Metabolomics : Official Journal of the Metabolomic Society. 11: 707-721. PMID 26190955 DOI: 10.1007/S11306-014-0729-8 |
0.761 |
|
| 2015 |
Tsugawa H, Cajka T, Kind T, Ma Y, Higgins B, Ikeda K, Kanazawa M, VanderGheynst J, Fiehn O, Arita M. MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis. Nature Methods. 12: 523-6. PMID 25938372 DOI: 10.1038/Nmeth.3393 |
0.366 |
|
| 2015 |
Miyamoto S, Taylor SL, Barupal DK, Taguchi A, Wohlgemuth G, Wikoff WR, Yoneda KY, Gandara DR, Hanash SM, Kim K, Fiehn O. Systemic Metabolomic Changes in Blood Samples of Lung Cancer Patients Identified by Gas Chromatography Time-of-Flight Mass Spectrometry. Metabolites. 5: 192-210. PMID 25859693 DOI: 10.3390/Metabo5020192 |
0.345 |
|
| 2015 |
Fahrmann J, Grapov D, Yang J, Hammock B, Fiehn O, Bell GI, Hara M. Systemic alterations in the metabolome of diabetic NOD mice delineate increased oxidative stress accompanied by reduced inflammation and hypertriglyceremia. American Journal of Physiology. Endocrinology and Metabolism. 308: E978-89. PMID 25852003 DOI: 10.1152/Ajpendo.00019.2015 |
0.39 |
|
| 2015 |
Grapov D, Wanichthanarak K, Fiehn O. MetaMapR: pathway independent metabolomic network analysis incorporating unknowns. Bioinformatics (Oxford, England). 31: 2757-60. PMID 25847005 DOI: 10.1093/Bioinformatics/Btv194 |
0.329 |
|
| 2015 |
Grapov D, Fahrmann J, Hwang J, Poudel A, Jo J, Periwal V, Fiehn O, Hara M. Diabetes Associated Metabolomic Perturbations in NOD Mice. Metabolomics : Official Journal of the Metabolomic Society. 11: 425-437. PMID 25755629 DOI: 10.1007/S11306-014-0706-2 |
0.338 |
|
| 2015 |
Kim T, Dreher K, Nilo-Poyanco R, Lee I, Fiehn O, Lange BM, Nikolau BJ, Sumner L, Welti R, Wurtele ES, Rhee SY. Patterns of metabolite changes identified from large-scale gene perturbations in Arabidopsis using a genome-scale metabolic network. Plant Physiology. 167: 1685-98. PMID 25670818 DOI: 10.1104/Pp.114.252361 |
0.318 |
|
| 2015 |
Wikoff WR, Grapov D, Fahrmann JF, DeFelice B, Rom WN, Pass HI, Kim K, Nguyen U, Taylor SL, Gandara DR, Kelly K, Fiehn O, Miyamoto S. Metabolomic markers of altered nucleotide metabolism in early stage adenocarcinoma. Cancer Prevention Research (Philadelphia, Pa.). 8: 410-8. PMID 25657018 DOI: 10.1158/1940-6207.Capr-14-0329 |
0.335 |
|
| 2015 |
Fiehn O, Putri SP, Saito K, Salek RM, Creek DJ. Metabolomics continues to expand: highlights from the 2015 metabolomics conference Metabolomics. 11: 1036-1040. DOI: 10.1007/S11306-015-0846-Z |
0.39 |
|
| 2015 |
Cheung WHK, Pasamontes A, Peirano DJ, Zhao W, Grafton-Cardwell EE, Kapaun T, Yokomi RK, Simmons J, Doll M, Fiehn O, Dandekar AM, Davis CE. Volatile organic compound (VOC) profiling of citrus tristeza virus infection in sweet orange citrus varietals using thermal desorption gas chromatography time of flight mass spectrometry (TD-GC/TOF-MS) Metabolomics. DOI: 10.1007/S11306-015-0807-6 |
0.315 |
|
| 2014 |
He Y, Hogrefe CE, Grapov D, Palazoglu M, Fiehn O, Turck CW, Golub MS. Identifying individual differences of fluoxetine response in juvenile rhesus monkeys by metabolite profiling. Translational Psychiatry. 4: e478. PMID 25369145 DOI: 10.1038/Tp.2014.116 |
0.306 |
|
| 2014 |
Kind T, Okazaki Y, Saito K, Fiehn O. LipidBlast templates as flexible tools for creating new in-silico tandem mass spectral libraries. Analytical Chemistry. 86: 11024-7. PMID 25340521 DOI: 10.1021/Ac502511A |
0.402 |
|
| 2014 |
Cajka T, Fiehn O. Comprehensive analysis of lipids in biological systems by liquid chromatography-mass spectrometry. Trends in Analytical Chemistry : Trac. 61: 192-206. PMID 25309011 DOI: 10.1016/J.Trac.2014.04.017 |
0.385 |
|
| 2014 |
Ma Y, Kind T, Yang D, Leon C, Fiehn O. MS2Analyzer: A software for small molecule substructure annotations from accurate tandem mass spectra. Analytical Chemistry. 86: 10724-31. PMID 25263576 DOI: 10.1021/Ac502818E |
0.339 |
|
| 2014 |
Lee do Y, Kind T, Yoon YR, Fiehn O, Liu KH. Comparative evaluation of extraction methods for simultaneous mass-spectrometric analysis of complex lipids and primary metabolites from human blood plasma. Analytical and Bioanalytical Chemistry. 406: 7275-86. PMID 25171832 DOI: 10.1007/S00216-014-8124-X |
0.334 |
|
| 2014 |
Blekhman R, Perry GH, Shahbaz S, Fiehn O, Clark AG, Gilad Y. Comparative metabolomics in primates reveals the effects of diet and gene regulatory variation on metabolic divergence. Scientific Reports. 4: 5809. PMID 25069065 DOI: 10.1038/Srep05809 |
0.336 |
|
| 2014 |
Ogawa T, Furuhashi T, Okazawa A, Nakai R, Nakazawa M, Kind T, Fiehn O, Kanaya S, Arita M, Ohta D. Exploration of polar lipid accumulation profiles in Euglena gracilis using LipidBlast, an MS/MS spectral library constructed in silico. Bioscience, Biotechnology, and Biochemistry. 78: 14-8. PMID 25036478 DOI: 10.1080/09168451.2014.877826 |
0.364 |
|
| 2014 |
Niehaus TD, Richardson LG, Gidda SK, ElBadawi-Sidhu M, Meissen JK, Mullen RT, Fiehn O, Hanson AD. Plants utilize a highly conserved system for repair of NADH and NADPH hydrates. Plant Physiology. 165: 52-61. PMID 24599492 DOI: 10.1104/Pp.114.236539 |
0.729 |
|
| 2014 |
Aksenov AA, Pasamontes A, Peirano DJ, Zhao W, Dandekar AM, Fiehn O, Ehsani R, Davis CE. Detection of huanglongbing disease using differential mobility spectrometry Analytical Chemistry. 86: 2481-2488. PMID 24484549 DOI: 10.1021/Ac403469Y |
0.31 |
|
| 2014 |
Campbell C, Grapov D, Fiehn O, Chandler CJ, Burnett DJ, Souza EC, Casazza GA, Gustafson MB, Keim NL, Newman JW, Hunter GR, Fernandez JR, Garvey WT, Harper ME, Hoppel CL, et al. Improved metabolic health alters host metabolism in parallel with changes in systemic xeno-metabolites of gut origin. Plos One. 9: e84260. PMID 24416208 DOI: 10.1371/Journal.Pone.0084260 |
0.762 |
|
| 2014 |
Aguer C, Fiehn O, Seifert EL, Bézaire V, Meissen JK, Daniels A, Scott K, Renaud JM, Padilla M, Bickel DR, Dysart M, Adams SH, Harper ME. Erratum: Muscle uncoupling protein 3 overexpression mimics endurance training and reduces circulating biomarkers of incomplete β-oxidation (FASEB Journal (2013) 27 (4213- 4225) DOI: 10.1096/fj.13-234302) The Faseb Journal. 28. DOI: 10.1096/Fj.13-234302Err |
0.717 |
|
| 2014 |
Yang D, Zhang Y, Barupal DK, Fan X, Gustafson R, Guo R, Fiehn O. Metabolomics of photobiological hydrogen production induced by CCCP in Chlamydomonas reinhardtii International Journal of Hydrogen Energy. 39: 150-158. DOI: 10.1016/J.Ijhydene.2013.09.116 |
0.32 |
|
| 2014 |
Creek DJ, Dunn WB, Fiehn O, Griffin JL, Hall RD, Lei Z, Mistrik R, Neumann S, Schymanski EL, Sumner LW, Trengove R, Wolfender JL. Metabolite identification: are you sure? And how do your peers gauge your confidence? Metabolomics. 10: 350-353. DOI: 10.1007/S11306-014-0656-8 |
0.377 |
|
| 2013 |
Perroud B, Jafar-Nejad P, Wikoff WR, Gatchel JR, Wang L, Barupal DK, Crespo-Barreto J, Fiehn O, Zoghbi HY, Kaddurah-Daouk R. Pharmacometabolomic signature of ataxia SCA1 mouse model and lithium effects. Plos One. 8: e70610. PMID 23936457 DOI: 10.1371/Journal.Pone.0070610 |
0.354 |
|
| 2013 |
Yerges-Armstrong LM, Ellero-Simatos S, Georgiades A, Zhu H, Lewis JP, Horenstein RB, Beitelshees AL, Dane A, Reijmers T, Hankemeier T, Fiehn O, Shuldiner AR, Kaddurah-Daouk R. Purine pathway implicated in mechanism of resistance to aspirin therapy: pharmacometabolomics-informed pharmacogenomics. Clinical Pharmacology and Therapeutics. 94: 525-32. PMID 23839601 DOI: 10.1038/Clpt.2013.119 |
0.321 |
|
| 2013 |
Ibáñez C, Simó C, Barupal DK, Fiehn O, Kivipelto M, Cedazo-MÃnguez A, Cifuentes A. A new metabolomic workflow for early detection of Alzheimer's disease. Journal of Chromatography. A. 1302: 65-71. PMID 23827464 DOI: 10.1016/J.Chroma.2013.06.005 |
0.335 |
|
| 2013 |
Aguer C, Fiehn O, Seifert EL, Bézaire V, Meissen JK, Daniels A, Scott K, Renaud JM, Padilla M, Bickel DR, Dysart M, Adams SH, Harper ME. Muscle uncoupling protein 3 overexpression mimics endurance training and reduces circulating biomarkers of incomplete β-oxidation. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 27: 4213-25. PMID 23825224 DOI: 10.1096/Fj.13-234302 |
0.73 |
|
| 2013 |
Kind T, Liu KH, Lee do Y, DeFelice B, Meissen JK, Fiehn O. LipidBlast in silico tandem mass spectrometry database for lipid identification. Nature Methods. 10: 755-8. PMID 23817071 DOI: 10.1038/Nmeth.2551 |
0.779 |
|
| 2013 |
Lee do Y, Fiehn O. Metabolomic response of Chlamydomonas reinhardtii to the inhibition of target of rapamycin (TOR) by rapamycin. Journal of Microbiology and Biotechnology. 23: 923-31. PMID 23727803 DOI: 10.4014/Jmb.1304.04057 |
0.35 |
|
| 2013 |
Davis MC, Fiehn O, Durnford DG. Metabolic acclimation to excess light intensity in Chlamydomonas reinhardtii. Plant, Cell & Environment. 36: 1391-405. PMID 23346954 DOI: 10.1111/Pce.12071 |
0.357 |
|
| 2013 |
Kaddurah-Daouk R, Bogdanov MB, Wikoff WR, Zhu H, Boyle SH, Churchill E, Wang Z, Rush AJ, Krishnan RR, Pickering E, Delnomdedieu M, Fiehn O. Pharmacometabolomic mapping of early biochemical changes induced by sertraline and placebo Translational Psychiatry. 3. PMID 23340506 DOI: 10.1038/Tp.2012.142 |
0.306 |
|
| 2013 |
Kim S, Lee do Y, Wohlgemuth G, Park HS, Fiehn O, Kim KH. Evaluation and optimization of metabolome sample preparation methods for Saccharomyces cerevisiae. Analytical Chemistry. 85: 2169-76. PMID 23289506 DOI: 10.1021/Ac302881E |
0.328 |
|
| 2013 |
Zhu H, Bogdanov MB, Boyle SH, Matson W, Sharma S, Matson S, Churchill E, Fiehn O, Rush JA, Krishnan RR, Pickering E, Delnomdedieu M, Kaddurah-Daouk R. Metabolites Quantified by the LCECA platform. Plos One. DOI: 10.1371/Journal.Pone.0068283.T001 |
0.345 |
|
| 2012 |
Botanga CJ, Bethke G, Chen Z, Gallie DR, Fiehn O, Glazebrook J. Metabolite profiling of Arabidopsis inoculated with Alternaria brassicicola reveals that ascorbate reduces disease severity. Molecular Plant-Microbe Interactions : Mpmi. 25: 1628-38. PMID 23134520 DOI: 10.1094/Mpmi-07-12-0179-R |
0.317 |
|
| 2012 |
Meissen JK, Yuen BT, Kind T, Riggs JW, Barupal DK, Knoepfler PS, Fiehn O. Induced pluripotent stem cells show metabolomic differences to embryonic stem cells in polyunsaturated phosphatidylcholines and primary metabolism. Plos One. 7: e46770. PMID 23077522 DOI: 10.1371/Journal.Pone.0046770 |
0.773 |
|
| 2012 |
Budczies J, Denkert C, Müller BM, Brockmöller SF, Klauschen F, Györffy B, Dietel M, Richter-Ehrenstein C, Marten U, Salek RM, Griffin JL, Hilvo M, OreÅ¡iÄ M, Wohlgemuth G, Fiehn O. Remodeling of central metabolism in invasive breast cancer compared to normal breast tissue - a GC-TOFMS based metabolomics study. Bmc Genomics. 13: 334. PMID 22823888 DOI: 10.1186/1471-2164-13-334 |
0.305 |
|
| 2012 |
Trupp M, Zhu H, Wikoff WR, Baillie RA, Zeng ZB, Karp PD, Fiehn O, Krauss RM, Kaddurah-Daouk R. Metabolomics reveals amino acids contribute to variation in response to simvastatin treatment. Plos One. 7: e38386. PMID 22808006 DOI: 10.1371/Journal.Pone.0038386 |
0.349 |
|
| 2012 |
Lee do Y, Park JJ, Barupal DK, Fiehn O. System response of metabolic networks in Chlamydomonas reinhardtii to total available ammonium. Molecular & Cellular Proteomics : McP. 11: 973-88. PMID 22787274 DOI: 10.1074/Mcp.M111.016733 |
0.379 |
|
| 2012 |
Ho PP, Kanter JL, Johnson AM, Srinagesh HK, Chang EJ, Purdy TM, van Haren K, Wikoff WR, Kind T, Khademi M, Matloff LY, Narayana S, Hur EM, Lindstrom TM, He Z, ... Fiehn O, et al. Identification of naturally occurring fatty acids of the myelin sheath that resolve neuroinflammation. Science Translational Medicine. 4: 137ra73. PMID 22674551 DOI: 10.1126/Scitranslmed.3003831 |
0.344 |
|
| 2012 |
Quanbeck SM, Brachova L, Campbell AA, Guan X, Perera A, He K, Rhee SY, Bais P, Dickerson JA, Dixon P, Wohlgemuth G, Fiehn O, Barkan L, Lange I, Lange BM, et al. Metabolomics as a Hypothesis-Generating Functional Genomics Tool for the Annotation of Arabidopsis thaliana Genes of "Unknown Function". Frontiers in Plant Science. 3: 15. PMID 22645570 DOI: 10.3389/Fpls.2012.00015 |
0.359 |
|
| 2012 |
Kind T, Meissen JK, Yang D, Nocito F, Vaniya A, Cheng YS, Vandergheynst JS, Fiehn O. Qualitative analysis of algal secretions with multiple mass spectrometric platforms. Journal of Chromatography. A. 1244: 139-47. PMID 22608776 DOI: 10.1016/J.Chroma.2012.04.074 |
0.78 |
|
| 2012 |
Barupal DK, Haldiya PK, Wohlgemuth G, Kind T, Kothari SL, Pinkerton KE, Fiehn O. MetaMapp: mapping and visualizing metabolomic data by integrating information from biochemical pathways and chemical and mass spectral similarity. Bmc Bioinformatics. 13: 99. PMID 22591066 DOI: 10.1186/1471-2105-13-99 |
0.368 |
|
| 2012 |
Song IS, Lee do Y, Shin MH, Kim H, Ahn YG, Park I, Kim KH, Kind T, Shin JG, Fiehn O, Liu KH. Pharmacogenetics meets metabolomics: discovery of tryptophan as a new endogenous OCT2 substrate related to metformin disposition. Plos One. 7: e36637. PMID 22590580 DOI: 10.1371/Journal.Pone.0036637 |
0.308 |
|
| 2012 |
Wilmarth PA, Short KK, Fiehn O, Lutsenko S, David LL, Burkhead JL. A systems approach implicates nuclear receptor targeting in the Atp7b -/- mouse model of Wilson's disease Metallomics. 4: 660-668. PMID 22565294 DOI: 10.1039/C2Mt20017A |
0.31 |
|
| 2012 |
Denkert C, Bucher E, Hilvo M, Salek R, Oreši? M, Griffin J, Brockmöller S, Klauschen F, Loibl S, Barupal DK, Budczies J, Iljin K, Nekljudova V, Fiehn O. Metabolomics of human breast cancer: new approaches for tumor typing and biomarker discovery. Genome Medicine. 4: 37. PMID 22546809 DOI: 10.1186/Gm336 |
0.311 |
|
| 2012 |
Brockmöller SF, Bucher E, Müller BM, Budczies J, Hilvo M, Griffin JL, OreÅ¡iÄ M, Kallioniemi O, Iljin K, Loibl S, Darb-Esfahani S, Sinn BV, Klauschen F, Prinzler J, Bangemann N, ... ... Fiehn O, et al. Integration of metabolomics and expression of glycerol-3-phosphate acyltransferase (GPAM) in breast cancer-link to patient survival, hormone receptor status, and metabolic profiling. Journal of Proteome Research. 11: 850-60. PMID 22070544 DOI: 10.1021/Pr200685R |
0.315 |
|
| 2012 |
Fiehn O. The 27th asilomar conference on mass spectrometry, metabolomics, October 2011 Journal of the American Society For Mass Spectrometry. 23: 1000-1002. DOI: 10.1007/S13361-012-0364-4 |
0.34 |
|
| 2011 |
Budczies J, Denkert C, Mueller B, Brockmoeller SF, Dietel M, Radke C, Loibl S, Von Minckwitz G, Griffin JL, Oresic M, Wohlgemut G, Fiehn O. Separation of breast cancer from normal tissues using GC-MS-based metabolite profiling. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 29: 10514. PMID 28021810 DOI: 10.1200/Jco.2011.29.15_Suppl.10514 |
0.351 |
|
| 2011 |
Hirahatake KM, Meissen JK, Fiehn O, Adams SH. Comparative effects of fructose and glucose on lipogenic gene expression and intermediary metabolism in HepG2 liver cells. Plos One. 6: e26583. PMID 22096489 DOI: 10.1371/Journal.Pone.0026583 |
0.75 |
|
| 2011 |
Skogerson K, Wohlgemuth G, Barupal DK, Fiehn O. The volatile compound BinBase mass spectral database. Bmc Bioinformatics. 12: 321. PMID 21816034 DOI: 10.1186/1471-2105-12-321 |
0.798 |
|
| 2011 |
Kumari S, Stevens D, Kind T, Denkert C, Fiehn O. Applying in-silico retention index and mass spectra matching for identification of unknown metabolites in accurate mass GC-TOF mass spectrometry. Analytical Chemistry. 83: 5895-902. PMID 21678983 DOI: 10.1021/Ac2006137 |
0.399 |
|
| 2011 |
Fiehn O, Barupal DK, Kind T. Extending biochemical databases by metabolomic surveys. The Journal of Biological Chemistry. 286: 23637-43. PMID 21566124 DOI: 10.1074/Jbc.R110.173617 |
0.331 |
|
| 2011 |
Robertson DG, Ruepp SU, Stryker SA, Hnatyshyn SY, Shipkova PA, Aranibar N, Mcnaney CA, Fiehn O, Reily MD. Metabolomic and transcriptomic changes induced by overnight (16 h) fasting in male and female Sprague-Dawley rats. Chemical Research in Toxicology. 24: 481-7. PMID 21381695 DOI: 10.1021/Tx200074F |
0.357 |
|
| 2011 |
Buckendahl AC, Budczies J, Fiehn O, Darb-Esfahani S, Kind T, Noske A, Weichert W, Sehouli J, Braicu E, Dietel M, Denkert C. Prognostic impact of AMP-activated protein kinase expression in ovarian carcinoma: correlation of protein expression and GC/TOF-MS-based metabolomics. Oncology Reports. 25: 1005-12. PMID 21271224 DOI: 10.3892/Or.2011.1162 |
0.327 |
|
| 2011 |
Reichenbach SE, Tian X, Tao Q, Ledford EB, Wu Z, Fiehn O. Informatics for cross-sample analysis with comprehensive two-dimensional gas chromatography and high-resolution mass spectrometry (GCxGC-HRMS). Talanta. 83: 1279-88. PMID 21215864 DOI: 10.1016/J.Talanta.2010.09.057 |
0.32 |
|
| 2010 |
Kind T, Fiehn O. Advances in structure elucidation of small molecules using mass spectrometry. Bioanalytical Reviews. 2: 23-60. PMID 21289855 DOI: 10.1007/S12566-010-0015-9 |
0.395 |
|
| 2010 |
Fiehn O, Garvey WT, Newman JW, Lok KH, Hoppel CL, Adams SH. Plasma metabolomic profiles reflective of glucose homeostasis in non-diabetic and type 2 diabetic obese African-American women. Plos One. 5: e15234. PMID 21170321 DOI: 10.1371/Journal.Pone.0015234 |
0.302 |
|
| 2010 |
Sana TR, Fischer S, Wohlgemuth G, Katrekar A, Jung KH, Ronald PC, Fiehn O. Metabolomic and transcriptomic analysis of the rice response to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae. Metabolomics : Official Journal of the Metabolomic Society. 6: 451-465. PMID 20676379 DOI: 10.1007/S11306-010-0218-7 |
0.391 |
|
| 2010 |
Shin MH, Lee do Y, Liu KH, Fiehn O, Kim KH. Evaluation of sampling and extraction methodologies for the global metabolic profiling of Saccharophagus degradans. Analytical Chemistry. 82: 6660-6. PMID 20669998 DOI: 10.1021/Ac1012656 |
0.375 |
|
| 2010 |
Barupal DK, Kind T, Kothari SL, Lee do Y, Fiehn O. Hydrocarbon phenotyping of algal species using pyrolysis-gas chromatography mass spectrometry. Bmc Biotechnology. 10: 40. PMID 20492649 DOI: 10.1186/1472-6750-10-40 |
0.382 |
|
| 2010 |
Dandekar AM, Martinelli F, Davis CE, Bhushan A, Zhao W, Fiehn O, Skogerson K, Wohlgemuth G, D'Souza R, Roy S, Reagan RL, Lin D, Cary R, Pardington P, Gupta G. Analysis of early host responses for asymptomatic disease detection and management of specialty crops. Critical Reviews in Immunology. 30: 277-89. PMID 20370635 DOI: 10.1615/Critrevimmunol.V30.I3.50 |
0.752 |
|
| 2010 |
Seifert EL, Fiehn O, Bezaire V, Bickel DR, Wohlgemuth G, Adams SH, Harper ME. Long-chain fatty acid combustion rate is associated with unique metabolite profiles in skeletal muscle mitochondria. Plos One. 5: e9834. PMID 20352092 DOI: 10.1371/Journal.Pone.0009834 |
0.329 |
|
| 2010 |
Abate S, Ahn YG, Kind T, Cataldi TR, Fiehn O. Determination of elemental compositions by gas chromatography/time-of-flight mass spectrometry using chemical and electron ionization. Rapid Communications in Mass Spectrometry : Rcm. 24: 1172-80. PMID 20301109 DOI: 10.1002/Rcm.4482 |
0.365 |
|
| 2010 |
Shin MH, Lee do Y, Wohlgemuth G, Choi IG, Fiehn O, Kim KH. Global metabolite profiling of agarose degradation by Saccharophagus degradans 2-40. New Biotechnology. 27: 156-68. PMID 20215059 DOI: 10.1016/J.Nbt.2010.02.023 |
0.395 |
|
| 2010 |
Skogerson K, Harrigan GG, Reynolds TL, Halls SC, Ruebelt M, Iandolino A, Pandravada A, Glenn KC, Fiehn O. Impact of genetics and environment on the metabolite composition of maize grain. Journal of Agricultural and Food Chemistry. 58: 3600-10. PMID 20158212 DOI: 10.1021/Jf903705Y |
0.794 |
|
| 2010 |
Bais P, Moon SM, He K, Leitao R, Dreher K, Walk T, Sucaet Y, Barkan L, Wohlgemuth G, Roth MR, Wurtele ES, Dixon P, Fiehn O, Lange BM, Shulaev V, et al. PlantMetabolomics.org: a web portal for plant metabolomics experiments. Plant Physiology. 152: 1807-16. PMID 20147492 DOI: 10.1104/Pp.109.151027 |
0.332 |
|
| 2010 |
Taylor SL, Ganti S, Bukanov NO, Chapman A, Fiehn O, Osier M, Kim K, Weiss RH. A metabolomics approach using juvenile cystic mice to identify urinary biomarkers and altered pathways in polycystic kidney disease. American Journal of Physiology. Renal Physiology. 298: F909-22. PMID 20130118 DOI: 10.1152/Ajprenal.00722.2009 |
0.342 |
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| 2010 |
Shin MH, Lee DY, Skogerson K, Wohlgemuth G, Choi IG, Fiehn O, Kim KH. Global metabolic profiling of plant cell wall polysaccharide degradation by Saccharophagus degradans. Biotechnology and Bioengineering. 105: 477-88. PMID 19806675 DOI: 10.1002/Bit.22557 |
0.79 |
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| 2010 |
Budczies J, Denkert C, Müller BM, Dietel M, Radke C, Griffin JL, Oresic M, Wohlgemut G, Fiehn O. Abstract 5573: GC-TOF mass spectroscopy reveals strong dependence of breast cancer metabolome on estrogene receptor, but not on HER2 status Cancer Research. 70: 5573-5573. DOI: 10.1158/1538-7445.Am10-5573 |
0.345 |
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| 2009 |
Kind T, Fiehn O. What are the obstacles for an integrated system for comprehensive interpretation of cross-platform metabolic profile data? Bioanalysis. 1: 1511-4. PMID 21083097 DOI: 10.4155/Bio.09.141 |
0.301 |
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| 2009 |
Scalbert A, Brennan L, Fiehn O, Hankemeier T, Kristal BS, van Ommen B, Pujos-Guillot E, Verheij E, Wishart D, Wopereis S. Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research. Metabolomics : Official Journal of the Metabolomic Society. 5: 435-458. PMID 20046865 DOI: 10.1007/S11306-009-0168-0 |
0.415 |
|
| 2009 |
Kind T, Wohlgemuth G, Lee DY, Lu Y, Palazoglu M, Shahbaz S, Fiehn O. FiehnLib: mass spectral and retention index libraries for metabolomics based on quadrupole and time-of-flight gas chromatography/mass spectrometry. Analytical Chemistry. 81: 10038-48. PMID 19928838 DOI: 10.1021/Ac9019522 |
0.607 |
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| 2009 |
Matsuda F, Shinbo Y, Oikawa A, Hirai MY, Fiehn O, Kanaya S, Saito K. Assessment of metabolome annotation quality: a method for evaluating the false discovery rate of elemental composition searches. Plos One. 4: e7490. PMID 19847304 DOI: 10.1371/Journal.Pone.0007490 |
0.345 |
|
| 2009 |
Martinelli F, Uratsu SL, Reagan RL, Chen Y, Tricoli D, Fiehn O, Rocke DM, Gasser CS, Dandekar AM. Gene regulation in parthenocarpic tomato fruit. Journal of Experimental Botany. 60: 3873-90. PMID 19700496 DOI: 10.1093/Jxb/Erp227 |
0.339 |
|
| 2009 |
Skogerson K, Runnebaum R, Wohlgemuth G, de Ropp J, Heymann H, Fiehn O. Comparison of gas chromatography-coupled time-of-flight mass spectrometry and 1H nuclear magnetic resonance spectroscopy metabolite identification in white wines from a sensory study investigating wine body. Journal of Agricultural and Food Chemistry. 57: 6899-907. PMID 19588931 DOI: 10.1021/Jf9019322 |
0.8 |
|
| 2009 |
Kind T, Scholz M, Fiehn O. How Large Is the Metabolome? A Critical Analysis of Data Exchange Practices in Chemistry Plos One. 4. PMID 19415114 DOI: 10.1371/Journal.Pone.0005440 |
0.373 |
|
| 2009 |
Meyer RC, Lisec J, Sulpice R, Steinfath M, Gärtner T, Becher M, Witucka-Wall H, Korff Mv, Günther T, Childs L, Scharr H, Walter A, Törjek O, Fiehn O, Schurr U, et al. Analysis of Arabidopsis natural variation in biomass accumulation and metabolism New Biotechnology. 25: S307. DOI: 10.1016/J.Nbt.2009.06.878 |
0.327 |
|
| 2008 |
Denkert C, Budczies J, Weichert W, Wohlgemuth G, Scholz M, Kind T, Niesporek S, Noske A, Buckendahl A, Dietel M, Fiehn O. Metabolite profiling of human colon carcinoma--deregulation of TCA cycle and amino acid turnover. Molecular Cancer. 7: 72. PMID 18799019 DOI: 10.1186/1476-4598-7-72 |
0.322 |
|
| 2008 |
Lee DY, Fiehn O. High quality metabolomic data for Chlamydomonas reinhardtii. Plant Methods. 4: 7. PMID 18442406 DOI: 10.1186/1746-4811-4-7 |
0.558 |
|
| 2008 |
Ikegami T, Horie K, Saad N, Hosoya K, Fiehn O, Tanaka N. Highly efficient analysis of underivatized carbohydrates using monolithic-silica-based capillary hydrophilic interaction (HILIC) HPLC Analytical and Bioanalytical Chemistry. 391: 2533-2542. PMID 18415087 DOI: 10.1007/S00216-008-2060-6 |
0.343 |
|
| 2008 |
Fiehn O, Wohlgemuth G, Scholz M, Kind T, Lee DY, Lu Y, Moon S, Nikolau B. Quality control for plant metabolomics: reporting MSI-compliant studies. The Plant Journal : For Cell and Molecular Biology. 53: 691-704. PMID 18269577 DOI: 10.1111/J.1365-313X.2007.03387.X |
0.538 |
|
| 2008 |
Lisec J, Meyer RC, Steinfath M, Redestig H, Becher M, Witucka-Wall H, Fiehn O, Törjék O, Selbig J, Altmann T, Willmitzer L. Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations. The Plant Journal : For Cell and Molecular Biology. 53: 960-72. PMID 18047556 DOI: 10.1111/J.1365-313X.2007.03383.X |
0.361 |
|
| 2008 |
Fiehn O. Extending the breadth of metabolite profiling by gas chromatography coupled to mass spectrometry Trac - Trends in Analytical Chemistry. 27: 261-269. DOI: 10.1016/J.Trac.2008.01.007 |
0.427 |
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| 2007 |
Sumner LW, Amberg A, Barrett D, Beale MH, Beger R, Daykin CA, Fan TW, Fiehn O, Goodacre R, Griffin JL, Hankemeier T, Hardy N, Harnly J, Higashi R, Kopka J, et al. Proposed minimum reporting standards for chemical analysis Chemical Analysis Working Group (CAWG) Metabolomics Standards Initiative (MSI). Metabolomics : Official Journal of the Metabolomic Society. 3: 211-221. PMID 24039616 DOI: 10.1007/S11306-007-0082-2 |
0.342 |
|
| 2007 |
Kind T, Fiehn O. Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry Bmc Bioinformatics. 8. PMID 17389044 DOI: 10.1186/1471-2105-8-105 |
0.361 |
|
| 2007 |
Meyer RC, Steinfath M, Lisec J, Becher M, Witucka-Wall H, Törjék O, Fiehn O, Eckardt A, Willmitzer L, Selbig J, Altmann T. The metabolic signature related to high plant growth rate in Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America. 104: 4759-64. PMID 17360597 DOI: 10.1073/Pnas.0609709104 |
0.349 |
|
| 2007 |
Kind T, Tolstikov V, Fiehn O, Weiss RH. A comprehensive urinary metabolomic approach for identifying kidney cancerr Analytical Biochemistry. 363: 185-195. PMID 17316536 DOI: 10.1016/J.Ab.2007.01.028 |
0.39 |
|
| 2007 |
Huster D, Purnat TD, Burkhead JL, Ralle M, Fiehn O, Stuckert F, Olson NE, Teupser D, Lutsenko S. High copper selectively alters lipid metabolism and cell cycle machinery in the mouse model of Wilson disease. The Journal of Biological Chemistry. 282: 8343-55. PMID 17205981 DOI: 10.1074/Jbc.M607496200 |
0.326 |
|
| 2007 |
Frey IM, Rubio-Aliaga I, Siewert A, Sailer D, Drobyshev A, Beckers J, De Angelis MH, Aubert J, Hen AB, Fiehn O, Eichinger HM, Daniel H. Profiling at mRNA, protein, and metabolite levels reveals alterations in renal amino acid handling and glutathione metabolism in kidney tissue of Pept2-/- mice Physiological Genomics. 28: 301-310. PMID 17077276 DOI: 10.1152/Physiolgenomics.00193.2006 |
0.332 |
|
| 2007 |
Tolstikov VV, Fiehn O, Tanaka N. Application of liquid chromatography-mass spectrometry analysis in metabolomics: reversed-phase monolithic capillary chromatography and hydrophilic chromatography coupled to electrospray ionization-mass spectrometry Methods in Molecular Biology (Clifton, N.J.). 358: 141-155. PMID 17035685 DOI: 10.1007/978-1-59745-244-1_9 |
0.395 |
|
| 2007 |
Fiehn O, Kind T. Metabolite profiling in blood plasma Methods in Molecular Biology (Clifton, N.J.). 358: 3-17. PMID 17035677 DOI: 10.1007/978-1-59745-244-1_1 |
0.435 |
|
| 2006 |
Perroud B, Lee J, Valkova N, Dhirapong A, Lin PY, Fiehn O, Kültz D, Weiss RH. Pathway analysis of kidney cancer using proteomics and metabolic profiling Molecular Cancer. 5. PMID 17123452 DOI: 10.1186/1476-4598-5-64 |
0.356 |
|
| 2006 |
Dixon RA, Gang DR, Charlton AJ, Fiehn O, Kuiper HA, Reynolds TL, Tjeerdema RS, Jeffery EH, German JB, Ridley WP, Seiber JN. Applications of metabolomics in agriculture. Journal of Agricultural and Food Chemistry. 54: 8984-94. PMID 17117782 DOI: 10.1021/Jf061218T |
0.391 |
|
| 2006 |
Denkert C, Budczies J, Kind T, Weichert W, Tablack P, Sehouli J, Niesporek S, Könsgen D, Dietel M, Fiehn O. Mass spectrometry-based metabolic profiling reveals different metabolite patterns in invasive ovarian carcinomas and ovarian borderline tumors Cancer Research. 66: 10795-10804. PMID 17108116 DOI: 10.1158/0008-5472.Can-06-0755 |
0.382 |
|
| 2006 |
Fiehn O, Kristal B, Van Ommen B, Sumner LW, Sansone SA, Taylor C, Hardy N, Kaddurah-Daouk R. Establishing reporting standards for metabolomic and metabonomic studies: A call for participation Omics a Journal of Integrative Biology. 10: 158-163. PMID 16901221 DOI: 10.1089/Omi.2006.10.158 |
0.352 |
|
| 2006 |
Fiehn O. Metabolite profiling in Arabidopsis Methods in Molecular Biology (Clifton, N.J.). 323: 439-447. PMID 16739598 DOI: 10.1385/1-59745-003-0:439 |
0.417 |
|
| 2006 |
Kind T, Fiehn O. Metabolomic database annotations via query of elemental compositions: Mass accuracy is insufficient even at less than 1 ppm Bmc Bioinformatics. 7. PMID 16646969 DOI: 10.1186/1471-2105-7-234 |
0.402 |
|
| 2005 |
Bölling C, Fiehn O. Metabolite profiling of Chlamydomonas reinhardtii under nutrient deprivation Plant Physiology. 139: 1995-2005. PMID 16306140 DOI: 10.1104/Pp.105.071589 |
0.376 |
|
| 2005 |
Catchpole GS, Beckmann M, Enot DP, Mondhe M, Zywicki B, Taylor J, Hardy N, Smith A, King RD, Kell DB, Fiehn O, Draper J. Hierarchical metabolomics demonstrates substantial compositional similarity between genetically modified and conventional potato crops. Proceedings of the National Academy of Sciences of the United States of America. 102: 14458-62. PMID 16186495 DOI: 10.1073/Pnas.0503955102 |
0.354 |
|
| 2005 |
Shellie RA, Welthagen W, Zrostliková J, Spranger J, Ristow M, Fiehn O, Zimmermann R. Statistical methods for comparing comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry results: Metabolomic analysis of mouse tissue extracts Journal of Chromatography A. 1086: 83-90. PMID 16130658 DOI: 10.1016/J.Chroma.2005.05.088 |
0.357 |
|
| 2005 |
Nikiforova VJ, Kopka J, Tolstikov V, Fiehn O, Hopkins L, Hawkesford MJ, Hesse H, Hoefgen R. Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of arabidopsis plants Plant Physiology. 138: 304-318. PMID 15834012 DOI: 10.1104/Pp.104.053793 |
0.399 |
|
| 2005 |
Zywicki B, Catchpole G, Draper J, Fiehn O. Comparison of rapid liquid chromatography-electrospray ionization-tandem mass spectrometry methods for determination of glycoalkaloids in transgenic field-grown potatoes Analytical Biochemistry. 336: 178-186. PMID 15620882 DOI: 10.1016/J.Ab.2004.10.013 |
0.342 |
|
| 2005 |
Alt R, Riemer T, Fiehn O, Niederwieser D, Cross M. Evidence for Restricted Glycolytic Metabolism in Primary CD133+ Cells. Blood. 106: 1726-1726. DOI: 10.1182/Blood.V106.11.1726.1726 |
0.32 |
|
| 2005 |
Welthagen W, Shellie RA, Spranger J, Ristow M, Zimmermann R, Fiehn O. Comprehensive two-dimensional gas chromatography-time-of-flight mass spectrometry (GC × GC-TOF) for high resolution metabolomics: Biomarker discovery on spleen tissue extracts of obese NZO compared to lean C57BL/6 mice Metabolomics. 1: 65-73. DOI: 10.1007/S11306-005-1108-2 |
0.378 |
|
| 2004 |
Jenkins H, Hardy N, Beckmann M, Draper J, Smith AR, Taylor J, Fiehn O, Goodacre R, Bino RJ, Hall R, Kopka J, Lane GA, Lange BM, Liu JR, Mendes P, et al. A proposed framework for the description of plant metabolomics experiments and their results. Nature Biotechnology. 22: 1601-6. PMID 15583675 DOI: 10.1038/Nbt1041 |
0.3 |
|
| 2004 |
Bino RJ, Hall RD, Fiehn O, Kopka J, Saito K, Draper J, Nikolau BJ, Mendes P, Roessner-Tunali U, Beale MH, Trethewey RN, Lange BM, Wurtele ES, Sumner LW. Potential of metabolomics as a functional genomics tool. Trends in Plant Science. 9: 418-25. PMID 15337491 DOI: 10.1016/J.Tplants.2004.07.004 |
0.329 |
|
| 2004 |
Weckwerth W, Loureiro ME, Wenzel K, Fiehn O. Differential metabolic networks unravel the effects of silent plant phenotypes Proceedings of the National Academy of Sciences of the United States of America. 101: 7809-7814. PMID 15136733 DOI: 10.1073/Pnas.0303415101 |
0.37 |
|
| 2004 |
Scholz M, Gatzek S, Sterling A, Fiehn O, Selbig J. Metabolite fingerprinting: Detecting biological features by independent component analysis Bioinformatics. 20: 2447-2454. PMID 15087312 DOI: 10.1093/Bioinformatics/Bth270 |
0.334 |
|
| 2004 |
Wienkoop S, Glinski M, Tanaka N, Tolstikov V, Fiehn O, Weckwerth W. Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins Rapid Communications in Mass Spectrometry. 18: 643-650. PMID 15052571 DOI: 10.1002/Rcm.1376 |
0.311 |
|
| 2004 |
Weckwerth W, Wenzel K, Fiehn O. Process for the integrated extraction, identification and quantification of metabolites, proteins and RNA to reveal their co-regulation in biochemical networks Proteomics. 4: 78-83. PMID 14730673 DOI: 10.1002/Pmic.200200500 |
0.329 |
|
| 2003 |
Tolstikov VV, Lommen A, Nakanishi K, Tanaka N, Fiehn O. Monolithic Silica-Based Capillary Reversed-Phase Liquid Chromatography/Electrospray Mass Spectrometry for Plant Metabolomics Analytical Chemistry. 75: 6737-6740. PMID 14640754 DOI: 10.1021/Ac034716Z |
0.357 |
|
| 2003 |
Steuer R, Kurths J, Fiehn O, Weckwerth W. Observing and interpreting correlations in metabolomic networks Bioinformatics. 19: 1019-1026. PMID 12761066 DOI: 10.1093/Bioinformatics/Btg120 |
0.321 |
|
| 2003 |
Fiehn O. Metabolic networks of Cucurbita maxima phloem Phytochemistry. 62: 875-886. PMID 12590115 DOI: 10.1016/S0031-9422(02)00715-X |
0.379 |
|
| 2002 |
Weckwerth W, Fiehn O. Can we discover novel pathways using metabolomic analysis? Current Opinion in Biotechnology. 13: 156-160. PMID 11950569 DOI: 10.1016/S0958-1669(02)00299-9 |
0.318 |
|
| 2002 |
Fiehn O. Metabolomics - The link between genotypes and phenotypes Plant Molecular Biology. 48: 155-171. PMID 11860207 DOI: 10.1023/A:1013713905833 |
0.405 |
|
| 2002 |
Tolstikov VV, Fiehn O. Analysis of highly polar compounds of plant origin: Combination of hydrophilic interaction chromatography and electrospray ion trap mass spectrometry Analytical Biochemistry. 301: 298-307. PMID 11814300 DOI: 10.1006/Abio.2001.5513 |
0.397 |
|
| 2002 |
Kose F, Weckwerth W, Linke T, Fiehn O. Visualizing plant metabolomic correlation networks using clique-metabolite matrices Bioinformatics. 17: 1198-1208. PMID 11751228 DOI: 10.1093/Bioinformatics/17.12.1198 |
0.324 |
|
| 2001 |
Szopa J, Wilczyński G, Fiehn O, Wenczel A, Willmitzer L. Identification and quantification of catecholamines in potato plants (Solanum tuberosum) by GC-MS Phytochemistry. 58: 315-320. PMID 11551557 DOI: 10.1016/S0031-9422(01)00232-1 |
0.312 |
|
| 2001 |
Vogel G, Fiehn O, Jean-Richard-Dit-Bressel L, Boller T, Wiemken A, Aeschbacher RA, Wingler A. Trehalose metabolism in Arabidopsis: Occurrence of trehalose and molecular cloning and characterization of trehalose-6-phosphate synthase homologues Journal of Experimental Botany. 52: 1817-1826. PMID 11520870 DOI: 10.1093/Jexbot/52.362.1817 |
0.316 |
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| 2001 |
Roessner U, Luedemann A, Brust D, Fiehn O, Linke T, Willmitzer L, Fernie AR. Metabolic profiling allows comprehensive phenotyping of genetically or environmentally modified plant systems Plant Cell. 13: 11-29. PMID 11158526 DOI: 10.1105/Tpc.13.1.11 |
0.37 |
|
| 2001 |
Fiehn O. Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks Comparative and Functional Genomics. 2: 155-168. DOI: 10.1002/Cfg.82 |
0.382 |
|
| 2000 |
Fiehn O, Kopka J, Dörmann P, Altmann T, Trethewey RN, Willmitzer L. Metabolite profiling for plant functional genomics Nature Biotechnology. 18: 1157-1161. PMID 11062433 DOI: 10.1038/81137 |
0.419 |
|
| 2000 |
Weckwerth W, Willmitzer L, Fiehn O. Comparative quantification and identification of phosphoproteins using stable isotope labeling and liquid chromatography/mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 14: 1677-81. PMID 10962490 DOI: 10.1002/1097-0231(20000930)14:18<1677::Aid-Rcm84>3.0.Co;2-N |
0.348 |
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| 2000 |
Fiehn O, Kopka J, Trethewey RN, Willmitzer L. Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry Analytical Chemistry. 72: 3573-3580. PMID 10952545 DOI: 10.1021/Ac991142I |
0.407 |
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| 2000 |
Goodlett DR, Bruce JE, Anderson GA, Rist B, Pasa-Tolic L, Fiehn O, Smith RD, Aebersold R. Protein identification with a single accurate mass of a cysteine- containing peptide and constrained database searching Analytical Chemistry. 72: 1112-1118. PMID 10740847 DOI: 10.1021/Ac9913210 |
0.315 |
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