James Fitzpatrick - Related publications

Affiliations: 
Chemistry Carnegie Mellon University, Pittsburgh, PA 
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Eastman AE, Chen X, Hu X, Hartman AA, Pearlman Morales AM, Yang C, Lu J, Kueh HY, Guo S. Resolving Cell Cycle Speed in One Snapshot with a Live-Cell Fluorescent Reporter. Cell Reports. 31: 107804. PMID 32579930 DOI: 10.1016/j.celrep.2020.107804   
2020 Nitta N, Iino T, Isozaki A, Yamagishi M, Kitahama Y, Sakuma S, Suzuki Y, Tezuka H, Oikawa M, Arai F, Asai T, Deng D, Fukuzawa H, Hase M, Hasunuma T, et al. Raman image-activated cell sorting. Nature Communications. 11: 3452. PMID 32651381 DOI: 10.1038/s41467-020-17285-3   
2020 Wollman AJM, Muchová K, Chromiková Z, Wilkinson AJ, Barák I, Leake MC. Single-molecule optical microscopy of protein dynamics and computational analysis of images to determine cell structure development in differentiating . Computational and Structural Biotechnology Journal. 18: 1474-1486. PMID 32637045 DOI: 10.1016/j.csbj.2020.06.005   
2020 Bäckström A, Kugel L, Gnann C, Xu H, Aslan JE, Lundberg E, Stadler C. A Sample Preparation Protocol for High Throughput Immunofluorescence of Suspension Cells on an Adherent Surface. The Journal of Histochemistry and Cytochemistry : Official Journal of the Histochemistry Society. 22155420935403. PMID 32564662 DOI: 10.1369/0022155420935403   
2020 Chang S, Chen BB, Lv J, Fodjo EK, Qian RC, Li DW. Label-free chlorine and nitrogen-doped fluorescent carbon dots for target imaging of lysosomes in living cells. Mikrochimica Acta. 187: 435. PMID 32647994 DOI: 10.1007/s00604-020-04412-6   
2020 Chitirala P, Chang HF, Martzloff P, Harenberg C, Ravichandran K, Abdulreda MH, Berggren PO, Krause E, Schirra C, Leinders-Zufall T, Benseler F, Brose N, Rettig J. Studying the biology of cytotoxic T lymphocytes in vivo with a fluorescent granzyme B-mTFP knock-in mouse. Elife. 9. PMID 32696761 DOI: 10.7554/eLife.58065   
2020 Pulschen AA, Mutavchiev DR, Culley S, Sebastian KN, Roubinet J, Roubinet M, Risa GT, van Wolferen M, Roubinet C, Schmidt U, Dey G, Albers SV, Henriques R, Baum B. Live Imaging of a Hyperthermophilic Archaeon Reveals Distinct Roles for Two ESCRT-III Homologs in Ensuring a Robust and Symmetric Division. Current Biology : Cb. PMID 32502411 DOI: 10.1016/j.cub.2020.05.021   
2020 Mangione F, Martin-Blanco E. Imaging and Analysis of Tissue Orientation and Growth Dynamics in the Developing Drosophila Epithelia During Pupal Stages. Journal of Visualized Experiments : Jove. PMID 32568222 DOI: 10.3791/60282   
2020 Yanakieva D, Elter A, Bratsch J, Friedrich K, Becker S, Kolmar H. FACS-Based Functional Protein Screening via Microfluidic Co-encapsulation of Yeast Secretor and Mammalian Reporter Cells. Scientific Reports. 10: 10182. PMID 32576855 DOI: 10.1038/s41598-020-66927-5   
2020 Reichmuth AM, Zimmermann M, Wilhelm F, Frutiger A, Blickenstorfer Y, Fattinger C, Waldhoer M, Vörös J. Quantification of Molecular Interactions in Living Cells in Real Time using a Membrane Protein Nanopattern. Analytical Chemistry. PMID 32524822 DOI: 10.1021/acs.analchem.0c00987   
2020 Coelho S, Baek J, Graus MS, Halstead JM, Nicovich PR, Feher K, Gandhi H, Gooding JJ, Gaus K. Ultraprecise single-molecule localization microscopy enables in situ distance measurements in intact cells. Science Advances. 6: eaay8271. PMID 32494604 DOI: 10.1126/sciadv.aay8271   
2020 Zhang P, Yang J, Cho E, Lu Y. Bringing light into cell-free expression. Acs Synthetic Biology. PMID 32603590 DOI: 10.1021/acssynbio.0c00211   
2020 Gau DM, Roy P. Single Cell Migration Assay Using Human Breast Cancer MDA-MB-231 Cell Line. Bio-Protocol. 10. PMID 32656296 DOI: 10.21769/bioprotoc.3586   
2020 Monteiro CAP, Silva RC, Assis LG, Pereira G, Pereira GAL, Santos BS, Cabral Filho PE, Fontes A. Quantum dots functionalized with 3-mercaptophenylboronic acids as novel nanoplatforms to evaluate sialic acid content on cell membranes. Colloids and Surfaces. B, Biointerfaces. 193: 111142. PMID 32526653 DOI: 10.1016/j.colsurfb.2020.111142   
2020 Fernandes Póvoa EE, Ebbing ALP, Betist MC, van der Veen C, Korswagen HC. An optimized dissociation protocol for FACS-based isolation of rare cell types from L1 larvae. Methodsx. 7: 100922. PMID 32509539 DOI: 10.1016/j.mex.2020.100922   
2020 Morán MC, Cirisano F, Ferrari M. 3D profilometry and cell viability studies for drug response screening. Materials Science & Engineering. C, Materials For Biological Applications. 115: 111142. PMID 32600730 DOI: 10.1016/j.msec.2020.111142   
2020 Zimnicka AM, Chen Z, Toth PT, Minshall RD. Live-Cell FRET Imaging of Phosphorylation-Dependent Caveolin-1 Switch. Methods in Molecular Biology (Clifton, N.J.). 2169: 71-80. PMID 32548820 DOI: 10.1007/978-1-0716-0732-9_7   
2020 Machado MGC, Pound-Lana G, de Oliveira MA, Lanna EG, Fialho MCP, de Brito ACF, Barboza APM, Aguiar-Soares RDO, Mosqueira VCF. Labeling PLA-PEG nanocarriers with IR780: physical entrapment versus covalent attachment to polylactide. Drug Delivery and Translational Research. PMID 32613549 DOI: 10.1007/s13346-020-00812-6   
2020 Willis C, Nyffeler J, Harrill J. Phenotypic Profiling of Reference Chemicals across Biologically Diverse Cell Types Using the Cell Painting Assay. Slas Discovery : Advancing Life Sciences R & D. 2472555220928004. PMID 32546035 DOI: 10.1177/2472555220928004   
2020 Penjweini R, Roarke B, Alspaugh G, Gevorgyan A, Andreoni A, Pasut A, Sackett DL, Knutson JR. Single cell-based fluorescence lifetime imaging of intracellular oxygenation and metabolism. Redox Biology. 34: 101549. PMID 32403080 DOI: 10.1016/j.redox.2020.101549   
2020 Hasle N, Cooke A, Srivatsan S, Huang H, Stephany JJ, Krieger Z, Jackson D, Tang W, Pendyala S, Monnat RJ, Trapnell C, Hatch EM, Fowler DM. High-throughput, microscope-based sorting to dissect cellular heterogeneity. Molecular Systems Biology. 16: e9442. PMID 32500953 DOI: 10.15252/msb.20209442   
2020 Cheung LY, Rizzoti K. Cell population characterisation and discovery using single cell technologies in endocrine systems. Journal of Molecular Endocrinology. PMID 32485670 DOI: 10.1530/JME-19-0276   
2020 Ndyabawe K, Haidekker M, Asthana A, Kisaalita WS. Spheroid Trapping and Calcium Spike Estimation Techniques toward Automation of 3D Culture. Slas Technology. 2472630320938319. PMID 32672140 DOI: 10.1177/2472630320938319   
2020 Ashmore-Harris C, Iafrate M, Saleem A, Fruhwirth GO. Non-invasive Reporter Gene Imaging of Cell Therapies, including T Cells and Stem Cells. Molecular Therapy : the Journal of the American Society of Gene Therapy. 28: 1392-1416. PMID 32243834 DOI: 10.1016/j.ymthe.2020.03.016   
2020 Moraes GS, Wink MR, Klamt F, Silva AO, da Cruz Fernandes M. Simplified low-cost methodology to establish, histologically process and analyze three-dimensional cancer cell spheroid arrays. European Journal of Cell Biology. 99: 151095. PMID 32646644 DOI: 10.1016/j.ejcb.2020.151095   
2020 Bai H, Liu Z, Zhang T, Du J, Zhou C, He W, Chau JHC, Kwok RTK, Lam JWY, Tang BZ. Multifunctional Supramolecular Assemblies with Aggregation-Induced Emission (AIE) for Cell Line Identification, Cell Contamination Evaluation, and Cancer Cell Discrimination. Acs Nano. PMID 32484332 DOI: 10.1021/acsnano.0c03404   
2020 Yeh CF, Lin CH, Chang HC, Tang CY, Lai PT, Hsu CH. A Microfluidic Single-Cell Cloning (SCC) Device for the Generation of Monoclonal Cells. Cells. 9. PMID 32570745 DOI: 10.3390/cells9061482   
2020 Lin WN, Tay MZ, Lu R, Liu Y, Chen CH, Cheow LF. The Role of Single-Cell Technology in the Study and Control of Infectious Diseases. Cells. 9. PMID 32531928 DOI: 10.3390/cells9061440   
2020 Mulas C, Hodgson AC, Kohler TN, Agley CC, Humphreys P, Kleine-Brüggeney H, Hollfelder F, Smith A, Chalut KJ. Microfluidic platform for 3D cell culture with live imaging and clone retrieval. Lab On a Chip. PMID 32573646 DOI: 10.1039/d0lc00165a   
2020 Sarnik SA, Sutermaster BA, Darling EM. Mass-Added Density Modulation for Sorting Cells Based on Differential Surface Protein Levels. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 32687243 DOI: 10.1002/cyto.a.24192   
2020 Ren D, Nemati Z, Lee CH, Li J, Haddadi K, Wallace DC, Burke PJ. An ultra-high bandwidth nano-electronic interface to the interior of living cells with integrated fluorescence readout of metabolic activity. Scientific Reports. 10: 10756. PMID 32612279 DOI: 10.1038/s41598-020-67408-5   
2020 McIntosh JC, Yang L, Wang T, Zhou H, Lockett MR, Oldenburg AL. Tracking the invasion of breast cancer cells in paper-based 3D cultures by OCT motility analysis. Biomedical Optics Express. 11: 3181-3194. PMID 32637249 DOI: 10.1364/BOE.382911   
2020 Bastida-Ruiz D, Wuillemin C, Pederencino A, Yaron M, Martinez de Tejada B, Pizzo SV, Cohen M. Activated α-macroglobulin binding to cell surface GRP78 induces trophoblastic cell fusion. Scientific Reports. 10: 9666. PMID 32541810 DOI: 10.1038/s41598-020-66554-0   
2020 Capdevila C, Calderon RI, Bush EC, Sheldon-Collins K, Sims PA, Yan KS. Single-Cell Transcriptional Profiling of the Intestinal Epithelium. Methods in Molecular Biology (Clifton, N.J.). 2171: 129-153. PMID 32705639 DOI: 10.1007/978-1-0716-0747-3_8   
2020 Jung KO, Kim TJ, Yu JH, Rhee S, Zhao W, Ha B, Red-Horse K, Gambhir SS, Pratx G. Whole-body tracking of single cells via positron emission tomography. Nature Biomedical Engineering. PMID 32541917 DOI: 10.1038/s41551-020-0570-5   
2020 Karuna A, Masia F, Chappell S, Errington R, Hartley AM, Jones DD, Borri P, Langbein W. Quantitative Imaging of B1 Cyclin Expression Across the Cell Cycle Using Green Fluorescent Protein Tagging and Epifluorescence. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 32613720 DOI: 10.1002/cyto.a.24038   
2020 Choi J, Zhou H, Landig R, Wu HY, Yu X, Von Stetina SE, Kucsko G, Mango SE, Needleman DJ, Samuel ADT, Maurer PC, Park H, Lukin MD. Probing and manipulating embryogenesis via nanoscale thermometry and temperature control. Proceedings of the National Academy of Sciences of the United States of America. PMID 32541064 DOI: 10.1073/pnas.1922730117   
2020 Ong LJY, Zhu L, Tan GJS, Toh YC. Quantitative Image-Based Cell Viability (QuantICV) Assay for Microfluidic 3D Tissue Culture Applications. Micromachines. 11. PMID 32660019 DOI: 10.3390/mi11070669   
2020 Yu SM, Li B, Granick S, Cho YK. Mechanical Adaptations of Epithelial Cells on Various Protruded Convex Geometries. Cells. 9. PMID 32527037 DOI: 10.3390/cells9061434   
2020 Ueno H, Maruo K, Inoue M, Kotera H, Suzuki T. Cell Culture on Low-Fluorescence and High-Resolution Photoresist. Micromachines. 11. PMID 32512915 DOI: 10.3390/mi11060571   
2020 Hu W, Zhang Y, Li B, Li Q, Ma K, Zhang C, Fu X. Manipulation of living cells with 450 nm laser photobiomodulation. Journal of Photochemistry and Photobiology. B, Biology. 209: 111896. PMID 32498029 DOI: 10.1016/j.jphotobiol.2020.111896   
2020 Kocere A, Resseguier J, Wohlmann J, Skjeldal FM, Khan S, Speth M, Dal NK, Ng MYW, Alonso-Rodriguez N, Scarpa E, Rizzello L, Battaglia G, Griffiths G, Fenaroli F. Real-time imaging of polymersome nanoparticles in zebrafish embryos engrafted with melanoma cancer cells: Localization, toxicity and treatment analysis. Ebiomedicine. 58: 102902. PMID 32707448 DOI: 10.1016/j.ebiom.2020.102902   
2020 Hauke S, Bittner T, Jessen HJ, Schultz C. Photo-releasable derivatives of inositol pyrophosphates. Methods in Enzymology. 641: 53-73. PMID 32713537 DOI: 10.1016/bs.mie.2020.04.036   
2020 Lu Y, Dong B, Song W, Sun Y, Mehmood AH, Lin W. An ESIPT-based ratiometric fluorescent probe for the discrimination of live and dead cells. Spectrochimica Acta. Part a, Molecular and Biomolecular Spectroscopy. 240: 118588. PMID 32563031 DOI: 10.1016/j.saa.2020.118588   
2020 Gala de Pablo J, Chisholm DR, Ambler CA, Peyman SA, Whiting A, Evans SD. Detection and time-tracking activation of a photosensitiser on live single colorectal cancer cells using Raman spectroscopy. The Analyst. PMID 32662453 DOI: 10.1039/d0an01023e   
2020 Rudlaff RM, Kraemer S, Marshman J, Dvorin JD. Three-dimensional ultrastructure of Plasmodium falciparum throughout cytokinesis. Plos Pathogens. 16: e1008587. PMID 32511279 DOI: 10.1371/journal.ppat.1008587   
2020 Zhang Y, Le T, Grabau R, Mohseni Z, Kim H, Natale DR, Feng L, Pan H, Yang H. TMEM16F phospholipid scramblase mediates trophoblast fusion and placental development. Science Advances. 6: eaba0310. PMID 32494719 DOI: 10.1126/sciadv.aba0310   
2020 Martínez-Banderas AI, Aires A, Plaza-García S, Colás L, Moreno JA, Ravasi T, Merzaban JS, Ramos-Cabrer P, Cortajarena AL, Kosel J. Magnetic core-shell nanowires as MRI contrast agents for cell tracking. Journal of Nanobiotechnology. 18: 42. PMID 32164746 DOI: 10.1186/s12951-020-00597-3   
2020 Chadwick W, Biswas S, Bianco S, Chan YM. Non-random distribution of vacuoles in. Physical Biology. PMID 32650322 DOI: 10.1088/1478-3975/aba510   
2020 Sood A, Sui Y, McDonough E, Santamaría-Pang A, Al-Kofahi Y, Pang Z, Jahrling PB, Kuhn JH, Ginty F. Comparison of Multiplexed Immunofluorescence Imaging to Chromogenic Immunohistochemistry of Skin Biomarkers in Response to Monkeypox Virus Infection. Viruses. 12. PMID 32717786 DOI: 10.3390/v12080787